Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 SNORA24.1-201ENST00000384401 135 ntBASIC3.27□□□□□ -1.89
NR1H4Q96RI1 AL354719.1-201ENST00000406535 843 ntBASIC3.27□□□□□ -1.89
NR1H4Q96RI1 RNU4-55P-201ENST00000410731 137 ntBASIC3.27□□□□□ -1.89
NR1H4Q96RI1 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NR1H4Q96RI1 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.27□□□□□ -1.89
NR1H4Q96RI1 AL356968.1-201ENST00000416622 474 ntBASIC3.27□□□□□ -1.89
NR1H4Q96RI1 AC099548.1-201ENST00000421443 426 ntBASIC3.27□□□□□ -1.89
NR1H4Q96RI1 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.27□□□□□ -1.89
NR1H4Q96RI1 ISCA1P1-201ENST00000426679 387 ntBASIC3.27□□□□□ -1.89
NR1H4Q96RI1 AL592045.1-201ENST00000429867 352 ntBASIC3.27□□□□□ -1.89
NR1H4Q96RI1 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.27□□□□□ -1.89
NR1H4Q96RI1 AC007389.2-201ENST00000434630 306 ntBASIC3.27□□□□□ -1.89
NR1H4Q96RI1 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.27□□□□□ -1.89
NR1H4Q96RI1 AL451074.3-201ENST00000437709 472 ntBASIC3.27□□□□□ -1.89
NR1H4Q96RI1 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.27□□□□□ -1.89
NR1H4Q96RI1 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NR1H4Q96RI1 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NR1H4Q96RI1 TPTE2P5-203ENST00000458118 728 ntBASIC3.27□□□□□ -1.89
NR1H4Q96RI1 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.27□□□□□ -1.89
NR1H4Q96RI1 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.27□□□□□ -1.89
NR1H4Q96RI1 HSPD1P15-201ENST00000505573 1122 ntBASIC3.27□□□□□ -1.89
NR1H4Q96RI1 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.27□□□□□ -1.89
NR1H4Q96RI1 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.27□□□□□ -1.89
NR1H4Q96RI1 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.27□□□□□ -1.89
NR1H4Q96RI1 RANP3-201ENST00000530970 276 ntBASIC3.27□□□□□ -1.89
NR1H4Q96RI1 OR5B19P-201ENST00000531766 928 ntBASIC3.27□□□□□ -1.89
NR1H4Q96RI1 OR5AL2P-201ENST00000532185 920 ntBASIC3.27□□□□□ -1.89
NR1H4Q96RI1 AC007536.1-201ENST00000533382 349 ntBASIC3.27□□□□□ -1.89
NR1H4Q96RI1 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.27□□□□□ -1.89
NR1H4Q96RI1 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.27□□□□□ -1.89
NR1H4Q96RI1 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.27□□□□□ -1.89
NR1H4Q96RI1 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NR1H4Q96RI1 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.27□□□□□ -1.89
NR1H4Q96RI1 AC008536.2-201ENST00000607284 349 ntBASIC3.27□□□□□ -1.89
NR1H4Q96RI1 AC012409.4-201ENST00000612923 249 ntBASIC3.27□□□□□ -1.89
NR1H4Q96RI1 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
NR1H4Q96RI1 AC099506.2-201ENST00000623074 221 ntBASIC3.27□□□□□ -1.89
NR1H4Q96RI1 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.27□□□□□ -1.89
NR1H4Q96RI1 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
NR1H4Q96RI1 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.27□□□□□ -1.89
NR1H4Q96RI1 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.27□□□□□ -1.89
NR1H4Q96RI1 AL356274.2-201ENST00000624379 3752 ntBASIC3.27□□□□□ -1.89
NR1H4Q96RI1 AL353743.1-202ENST00000431724 1695 ntBASIC3.27□□□□□ -1.89
NR1H4Q96RI1 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NR1H4Q96RI1 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NR1H4Q96RI1 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NR1H4Q96RI1 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NR1H4Q96RI1 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
NR1H4Q96RI1 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
NR1H4Q96RI1 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NR1H4Q96RI1 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
NR1H4Q96RI1 Y_RNA.1-201ENST00000352915 104 ntBASIC3.26□□□□□ -1.89
NR1H4Q96RI1 RNU6-1120P-201ENST00000362988 108 ntBASIC3.26□□□□□ -1.89
NR1H4Q96RI1 SNORA14A-201ENST00000364773 135 ntBASIC3.26□□□□□ -1.89
NR1H4Q96RI1 RN7SKP226-201ENST00000364912 300 ntBASIC3.26□□□□□ -1.89
NR1H4Q96RI1 RNU1-64P-201ENST00000365443 163 ntBASIC3.26□□□□□ -1.89
NR1H4Q96RI1 RNU6-1103P-201ENST00000384150 107 ntBASIC3.26□□□□□ -1.89
NR1H4Q96RI1 MIR1-2-201ENST00000384961 85 ntBASIC3.26□□□□□ -1.89
NR1H4Q96RI1 MIR454-201ENST00000390180 115 ntBASIC3.26□□□□□ -1.89
NR1H4Q96RI1 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
NR1H4Q96RI1 MIR888-201ENST00000401186 77 ntBASIC3.26□□□□□ -1.89
NR1H4Q96RI1 RPL21P65-201ENST00000406094 466 ntBASIC3.26□□□□□ -1.89
NR1H4Q96RI1 AC016397.1-201ENST00000412463 242 ntBASIC3.26□□□□□ -1.89
NR1H4Q96RI1 RPL32P35-201ENST00000415214 394 ntBASIC3.26□□□□□ -1.89
NR1H4Q96RI1 MTATP6P18-201ENST00000417994 673 ntBASIC3.26□□□□□ -1.89
NR1H4Q96RI1 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.26□□□□□ -1.89
NR1H4Q96RI1 HMGN2P30-201ENST00000423237 256 ntBASIC3.26□□□□□ -1.89
NR1H4Q96RI1 CALM2P2-201ENST00000428512 440 ntBASIC3.26□□□□□ -1.89
NR1H4Q96RI1 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NR1H4Q96RI1 DPPA3P1-201ENST00000448050 469 ntBASIC3.26□□□□□ -1.89
NR1H4Q96RI1 FABP5P15-201ENST00000453566 214 ntBASIC3.26□□□□□ -1.89
NR1H4Q96RI1 RNU7-182P-201ENST00000459009 62 ntBASIC3.26□□□□□ -1.89
NR1H4Q96RI1 MRPS17P3-201ENST00000465453 385 ntBASIC3.26□□□□□ -1.89
NR1H4Q96RI1 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.26□□□□□ -1.89
NR1H4Q96RI1 RPS26P21-201ENST00000475397 348 ntBASIC3.26□□□□□ -1.89
NR1H4Q96RI1 MTND2P33-201ENST00000506452 1031 ntBASIC3.26□□□□□ -1.89
NR1H4Q96RI1 ARL4AP2-201ENST00000507378 601 ntBASIC3.26□□□□□ -1.89
NR1H4Q96RI1 SCARNA20.6-201ENST00000517251 106 ntBASIC3.26□□□□□ -1.89
NR1H4Q96RI1 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NR1H4Q96RI1 MTCYBP20-201ENST00000524239 1129 ntBASIC3.26□□□□□ -1.89
NR1H4Q96RI1 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.26□□□□□ -1.89
NR1H4Q96RI1 AL359212.1-201ENST00000556608 614 ntBASIC3.26□□□□□ -1.89
NR1H4Q96RI1 AC120057.2-201ENST00000571520 271 ntBASIC3.26□□□□□ -1.89
NR1H4Q96RI1 AL022154.1-201ENST00000604698 785 ntBASIC3.26□□□□□ -1.89
NR1H4Q96RI1 MIR6867-201ENST00000610636 67 ntBASIC3.26□□□□□ -1.89
NR1H4Q96RI1 AC087241.4-201ENST00000612441 480 ntBASIC3.26□□□□□ -1.89
NR1H4Q96RI1 AC004852.3-201ENST00000614131 326 ntBASIC3.26□□□□□ -1.89
NR1H4Q96RI1 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.26□□□□□ -1.89
NR1H4Q96RI1 AL158209.2-201ENST00000619266 216 ntBASIC3.26□□□□□ -1.89
NR1H4Q96RI1 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.26□□□□□ -1.89
NR1H4Q96RI1 SEPT14P19-203ENST00000633205 211 ntBASIC3.26□□□□□ -1.89
NR1H4Q96RI1 AC084035.1-201ENST00000634543 607 ntBASIC3.26□□□□□ -1.89
NR1H4Q96RI1 Z99571.1-201ENST00000636677 394 ntBASIC3.26□□□□□ -1.89
NR1H4Q96RI1 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NR1H4Q96RI1 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.25□□□□□ -1.89
NR1H4Q96RI1 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
NR1H4Q96RI1 FRG1CP-201ENST00000358464 769 ntBASIC3.25□□□□□ -1.89
NR1H4Q96RI1 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.25□□□□□ -1.89
NR1H4Q96RI1 RNU6-270P-201ENST00000364131 105 ntBASIC3.25□□□□□ -1.89
NR1H4Q96RI1 SNORA62.1-201ENST00000364287 154 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms