Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 SNORA68.1-201ENST00000364537 132 ntBASIC2.03□□□□□ -2.08
LINC00477Q96M19 RNU1-140P-201ENST00000365040 165 ntBASIC2.03□□□□□ -2.08
LINC00477Q96M19 RNU6-76P-201ENST00000384060 104 ntBASIC2.03□□□□□ -2.08
LINC00477Q96M19 SNORA26.8-201ENST00000391306 124 ntBASIC2.03□□□□□ -2.08
LINC00477Q96M19 AL139397.2-201ENST00000404529 772 ntBASIC2.03□□□□□ -2.08
LINC00477Q96M19 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.03□□□□□ -2.08
LINC00477Q96M19 EEF1A1P41-201ENST00000414667 207 ntBASIC2.03□□□□□ -2.08
LINC00477Q96M19 RPL23AP39-201ENST00000415533 405 ntBASIC2.03□□□□□ -2.08
LINC00477Q96M19 RPL35AP12-201ENST00000425362 338 ntBASIC2.03□□□□□ -2.08
LINC00477Q96M19 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.03□□□□□ -2.08
LINC00477Q96M19 AL049734.2-201ENST00000441066 616 ntBASIC2.03□□□□□ -2.08
LINC00477Q96M19 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.03□□□□□ -2.08
LINC00477Q96M19 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.03□□□□□ -2.08
LINC00477Q96M19 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.03□□□□□ -2.08
LINC00477Q96M19 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.03□□□□□ -2.08
LINC00477Q96M19 PAXBP1P1-201ENST00000449315 447 ntBASIC2.03□□□□□ -2.08
LINC00477Q96M19 AP000705.1-201ENST00000454567 350 ntBASIC2.03□□□□□ -2.08
LINC00477Q96M19 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.03□□□□□ -2.08
LINC00477Q96M19 AC104563.1-201ENST00000476147 376 ntBASIC2.03□□□□□ -2.08
LINC00477Q96M19 AC126182.1-201ENST00000478134 357 ntBASIC2.03□□□□□ -2.08
LINC00477Q96M19 LARP1BP2-201ENST00000486594 519 ntBASIC2.03□□□□□ -2.08
LINC00477Q96M19 AL049874.1-201ENST00000489560 388 ntBASIC2.03□□□□□ -2.08
LINC00477Q96M19 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.03□□□□□ -2.08
LINC00477Q96M19 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.03□□□□□ -2.08
LINC00477Q96M19 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.03□□□□□ -2.08
LINC00477Q96M19 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.03□□□□□ -2.08
LINC00477Q96M19 SNORA31.18-201ENST00000517043 134 ntBASIC2.03□□□□□ -2.08
LINC00477Q96M19 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.03□□□□□ -2.08
LINC00477Q96M19 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.03□□□□□ -2.08
LINC00477Q96M19 AC107934.1-201ENST00000522215 217 ntBASIC2.03□□□□□ -2.08
LINC00477Q96M19 CASP1P1-201ENST00000526345 212 ntBASIC2.03□□□□□ -2.08
LINC00477Q96M19 DEFB108D-201ENST00000527787 222 ntBASIC2.03□□□□□ -2.08
LINC00477Q96M19 AL133153.1-201ENST00000557756 303 ntBASIC2.03□□□□□ -2.08
LINC00477Q96M19 AMZ2P1-203ENST00000565833 850 ntBASIC2.03□□□□□ -2.08
LINC00477Q96M19 AC002400.1-201ENST00000569310 726 ntBASIC2.03□□□□□ -2.08
LINC00477Q96M19 AC090616.3-201ENST00000582184 217 ntBASIC2.03□□□□□ -2.08
LINC00477Q96M19 AC105224.1-201ENST00000587055 421 ntBASIC2.03□□□□□ -2.08
LINC00477Q96M19 OR1M4P-201ENST00000589199 287 ntBASIC2.03□□□□□ -2.08
LINC00477Q96M19 AC110760.3-201ENST00000598794 467 ntBASIC2.03□□□□□ -2.08
LINC00477Q96M19 AP001981.2-201ENST00000603241 418 ntBASIC2.03□□□□□ -2.08
LINC00477Q96M19 AL356280.1-201ENST00000603614 379 ntBASIC2.03□□□□□ -2.08
LINC00477Q96M19 AL358072.1-201ENST00000604156 575 ntBASIC2.03□□□□□ -2.08
LINC00477Q96M19 OR2AS2P-201ENST00000606902 342 ntBASIC2.03□□□□□ -2.08
LINC00477Q96M19 BX664608.1-201ENST00000610519 487 ntBASIC2.03□□□□□ -2.08
LINC00477Q96M19 TUG1_1.1-201ENST00000610654 145 ntBASIC2.03□□□□□ -2.08
LINC00477Q96M19 AC122133.1-201ENST00000613964 233 ntBASIC2.03□□□□□ -2.08
LINC00477Q96M19 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.03□□□□□ -2.08
LINC00477Q96M19 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.03□□□□□ -2.08
LINC00477Q96M19 AC099654.13-201ENST00000639774 207 ntBASIC2.03□□□□□ -2.08
LINC00477Q96M19 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.03□□□□□ -2.08
LINC00477Q96M19 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.03□□□□□ -2.08
LINC00477Q96M19 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
LINC00477Q96M19 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.03□□□□□ -2.09
LINC00477Q96M19 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.02□□□□□ -2.09
LINC00477Q96M19 AC009902.3-201ENST00000606235 2172 ntBASIC2.02□□□□□ -2.09
LINC00477Q96M19 AL365361.1-201ENST00000566942 3481 ntBASIC2.02□□□□□ -2.09
LINC00477Q96M19 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.02□□□□□ -2.09
LINC00477Q96M19 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
LINC00477Q96M19 DEFB108F-201ENST00000344638 222 ntBASIC2.02□□□□□ -2.09
LINC00477Q96M19 RNU6-1078P-201ENST00000364522 103 ntBASIC2.02□□□□□ -2.09
LINC00477Q96M19 MT-TH-201ENST00000387441 69 ntBASIC2.02□□□□□ -2.09
LINC00477Q96M19 MIR1305-201ENST00000408300 86 ntBASIC2.02□□□□□ -2.09
LINC00477Q96M19 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.02□□□□□ -2.09
LINC00477Q96M19 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.02□□□□□ -2.09
LINC00477Q96M19 CYCSP46-201ENST00000423569 204 ntBASIC2.02□□□□□ -2.09
LINC00477Q96M19 RPS6P15-201ENST00000431996 751 ntBASIC2.02□□□□□ -2.09
LINC00477Q96M19 AL445687.1-201ENST00000439946 251 ntBASIC2.02□□□□□ -2.09
LINC00477Q96M19 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.02□□□□□ -2.09
LINC00477Q96M19 MRPL50P4-201ENST00000446432 475 ntBASIC2.02□□□□□ -2.09
LINC00477Q96M19 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.02□□□□□ -2.09
LINC00477Q96M19 RNU6-420P-201ENST00000458780 107 ntBASIC2.02□□□□□ -2.09
LINC00477Q96M19 RNU7-23P-201ENST00000459465 62 ntBASIC2.02□□□□□ -2.09
LINC00477Q96M19 RPL30P6-201ENST00000475925 342 ntBASIC2.02□□□□□ -2.09
LINC00477Q96M19 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.02□□□□□ -2.09
LINC00477Q96M19 AL135752.1-201ENST00000479477 471 ntBASIC2.02□□□□□ -2.09
LINC00477Q96M19 FAM172BP-201ENST00000487497 1089 ntBASIC2.02□□□□□ -2.09
LINC00477Q96M19 SRIP1-201ENST00000489235 288 ntBASIC2.02□□□□□ -2.09
LINC00477Q96M19 AC106872.3-201ENST00000495104 446 ntBASIC2.02□□□□□ -2.09
LINC00477Q96M19 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.02□□□□□ -2.09
LINC00477Q96M19 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.02□□□□□ -2.09
LINC00477Q96M19 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.02□□□□□ -2.09
LINC00477Q96M19 SNORA74D-201ENST00000516404 141 ntBASIC2.02□□□□□ -2.09
LINC00477Q96M19 RNU6-678P-201ENST00000516832 109 ntBASIC2.02□□□□□ -2.09
LINC00477Q96M19 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.02□□□□□ -2.09
LINC00477Q96M19 AC022080.3-201ENST00000544433 482 ntBASIC2.02□□□□□ -2.09
LINC00477Q96M19 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.02□□□□□ -2.09
LINC00477Q96M19 AC004486.1-201ENST00000546846 233 ntBASIC2.02□□□□□ -2.09
LINC00477Q96M19 MRPS36P5-201ENST00000551909 298 ntBASIC2.02□□□□□ -2.09
LINC00477Q96M19 AC007954.1-201ENST00000554198 494 ntBASIC2.02□□□□□ -2.09
LINC00477Q96M19 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.02□□□□□ -2.09
LINC00477Q96M19 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.02□□□□□ -2.09
LINC00477Q96M19 MIR4293-201ENST00000584305 78 ntBASIC2.02□□□□□ -2.09
LINC00477Q96M19 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.02□□□□□ -2.09
LINC00477Q96M19 AC060766.3-201ENST00000591442 263 ntBASIC2.02□□□□□ -2.09
LINC00477Q96M19 AC012493.2-201ENST00000595083 291 ntBASIC2.02□□□□□ -2.09
LINC00477Q96M19 DPPA3P3-201ENST00000603842 430 ntBASIC2.02□□□□□ -2.09
LINC00477Q96M19 AC013553.2-201ENST00000604244 589 ntBASIC2.02□□□□□ -2.09
LINC00477Q96M19 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.02□□□□□ -2.09
LINC00477Q96M19 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.02□□□□□ -2.09
LINC00477Q96M19 AL449363.1-201ENST00000617815 186 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 167.5 ms