Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.7□□□□□ -1.5
TRIM47Q96LD4 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC5.7□□□□□ -1.5
TRIM47Q96LD4 AC120057.2-201ENST00000571520 271 ntBASIC5.7□□□□□ -1.5
TRIM47Q96LD4 MIR3976-201ENST00000606807 139 ntBASIC5.7□□□□□ -1.5
TRIM47Q96LD4 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.7□□□□□ -1.5
TRIM47Q96LD4 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.7□□□□□ -1.5
TRIM47Q96LD4 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM47Q96LD4 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM47Q96LD4 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM47Q96LD4 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM47Q96LD4 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM47Q96LD4 A2MP1-204ENST00000566278 4130 ntBASIC5.7□□□□□ -1.5
TRIM47Q96LD4 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
TRIM47Q96LD4 AC100778.3-201ENST00000580060 1750 ntBASIC5.7□□□□□ -1.5
TRIM47Q96LD4 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.7□□□□□ -1.5
TRIM47Q96LD4 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
TRIM47Q96LD4 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM47Q96LD4 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
TRIM47Q96LD4 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM47Q96LD4 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
TRIM47Q96LD4 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
TRIM47Q96LD4 RNU6-249P-201ENST00000363016 102 ntBASIC5.69□□□□□ -1.5
TRIM47Q96LD4 RNU6-818P-201ENST00000364837 108 ntBASIC5.69□□□□□ -1.5
TRIM47Q96LD4 Y_RNA.331-201ENST00000365267 102 ntBASIC5.69□□□□□ -1.5
TRIM47Q96LD4 MIR129-1-201ENST00000384972 72 ntBASIC5.69□□□□□ -1.5
TRIM47Q96LD4 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM47Q96LD4 U3.32-201ENST00000408116 212 ntBASIC5.69□□□□□ -1.5
TRIM47Q96LD4 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM47Q96LD4 MTATP6P4-201ENST00000427725 675 ntBASIC5.69□□□□□ -1.5
TRIM47Q96LD4 RPL12P18-201ENST00000437175 325 ntBASIC5.69□□□□□ -1.5
TRIM47Q96LD4 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM47Q96LD4 RNU6-1234P-201ENST00000516877 103 ntBASIC5.69□□□□□ -1.5
TRIM47Q96LD4 AP006245.1-201ENST00000522549 120 ntBASIC5.69□□□□□ -1.5
TRIM47Q96LD4 AC007458.1-201ENST00000542812 373 ntBASIC5.69□□□□□ -1.5
TRIM47Q96LD4 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.69□□□□□ -1.5
TRIM47Q96LD4 HSPA8P4-201ENST00000511877 1920 ntBASIC5.69□□□□□ -1.5
TRIM47Q96LD4 AC015813.6-201ENST00000624409 5808 ntBASIC5.69□□□□□ -1.5
TRIM47Q96LD4 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC5.69□□□□□ -1.5
TRIM47Q96LD4 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.69□□□□□ -1.5
TRIM47Q96LD4 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM47Q96LD4 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM47Q96LD4 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.69□□□□□ -1.5
TRIM47Q96LD4 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.68□□□□□ -1.5
TRIM47Q96LD4 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
TRIM47Q96LD4 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM47Q96LD4 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM47Q96LD4 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM47Q96LD4 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM47Q96LD4 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.68□□□□□ -1.5
TRIM47Q96LD4 RNA5SP447-201ENST00000363749 119 ntBASIC5.68□□□□□ -1.5
TRIM47Q96LD4 Y_RNA.275-201ENST00000364726 110 ntBASIC5.68□□□□□ -1.5
TRIM47Q96LD4 Y_RNA.309-201ENST00000365046 111 ntBASIC5.68□□□□□ -1.5
TRIM47Q96LD4 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
TRIM47Q96LD4 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
TRIM47Q96LD4 SNORA57.1-201ENST00000391227 145 ntBASIC5.68□□□□□ -1.5
TRIM47Q96LD4 AL591034.2-201ENST00000402839 359 ntBASIC5.68□□□□□ -1.5
TRIM47Q96LD4 AC104333.2-201ENST00000422630 192 ntBASIC5.68□□□□□ -1.5
TRIM47Q96LD4 TOMM20P4-201ENST00000427861 435 ntBASIC5.68□□□□□ -1.5
TRIM47Q96LD4 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC5.68□□□□□ -1.5
TRIM47Q96LD4 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC5.68□□□□□ -1.5
TRIM47Q96LD4 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.68□□□□□ -1.5
TRIM47Q96LD4 RNA5SP464-201ENST00000516251 108 ntBASIC5.68□□□□□ -1.5
TRIM47Q96LD4 RNA5SP392-201ENST00000516905 112 ntBASIC5.68□□□□□ -1.5
TRIM47Q96LD4 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.68□□□□□ -1.5
TRIM47Q96LD4 AC012119.1-201ENST00000603184 222 ntBASIC5.68□□□□□ -1.5
TRIM47Q96LD4 RNU6-85P-201ENST00000605989 107 ntBASIC5.68□□□□□ -1.5
TRIM47Q96LD4 TUG1_4.1-201ENST00000619464 181 ntBASIC5.68□□□□□ -1.5
TRIM47Q96LD4 AL589994.2-201ENST00000621124 579 ntBASIC5.68□□□□□ -1.5
TRIM47Q96LD4 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC5.68□□□□□ -1.5
TRIM47Q96LD4 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
TRIM47Q96LD4 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
TRIM47Q96LD4 AL445487.1-201ENST00000415694 1580 ntBASIC5.67□□□□□ -1.5
TRIM47Q96LD4 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM47Q96LD4 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.67□□□□□ -1.5
TRIM47Q96LD4 IQCB2P-201ENST00000401788 1633 ntBASIC5.67□□□□□ -1.5
TRIM47Q96LD4 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM47Q96LD4 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.67□□□□□ -1.5
TRIM47Q96LD4 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM47Q96LD4 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM47Q96LD4 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM47Q96LD4 RNU6-151P-201ENST00000364158 107 ntBASIC5.67□□□□□ -1.5
TRIM47Q96LD4 RNU6-326P-201ENST00000365480 107 ntBASIC5.67□□□□□ -1.5
TRIM47Q96LD4 SMIM11P1-201ENST00000369586 178 ntBASIC5.67□□□□□ -1.5
TRIM47Q96LD4 RNU6-325P-201ENST00000411132 105 ntBASIC5.67□□□□□ -1.5
TRIM47Q96LD4 AC007738.1-201ENST00000413892 348 ntBASIC5.67□□□□□ -1.5
TRIM47Q96LD4 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM47Q96LD4 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM47Q96LD4 RN7SL432P-201ENST00000484057 298 ntBASIC5.67□□□□□ -1.5
TRIM47Q96LD4 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.67□□□□□ -1.5
TRIM47Q96LD4 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM47Q96LD4 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.67□□□□□ -1.5
TRIM47Q96LD4 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM47Q96LD4 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.67□□□□□ -1.5
TRIM47Q96LD4 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.67□□□□□ -1.5
TRIM47Q96LD4 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC5.67□□□□□ -1.5
TRIM47Q96LD4 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC5.67□□□□□ -1.5
TRIM47Q96LD4 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM47Q96LD4 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM47Q96LD4 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM47Q96LD4 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms