Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AC005832.2-201ENST00000538921 1430 ntBASIC2.58□□□□□ -2
USP47Q96K76 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.58□□□□□ -2
USP47Q96K76 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.58□□□□□ -2
USP47Q96K76 RNU6-270P-201ENST00000364131 105 ntBASIC2.58□□□□□ -2
USP47Q96K76 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.58□□□□□ -2
USP47Q96K76 SNORA51.11-201ENST00000384442 131 ntBASIC2.58□□□□□ -2
USP47Q96K76 RNU6-1122P-201ENST00000384449 107 ntBASIC2.58□□□□□ -2
USP47Q96K76 MIR325-201ENST00000385260 98 ntBASIC2.58□□□□□ -2
USP47Q96K76 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.58□□□□□ -2
USP47Q96K76 AC018630.2-202ENST00000422992 927 ntBASIC2.58□□□□□ -2
USP47Q96K76 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.58□□□□□ -2
USP47Q96K76 TRBV26OR9-2-201ENST00000432077 293 ntBASIC2.58□□□□□ -2
USP47Q96K76 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.58□□□□□ -2
USP47Q96K76 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.58□□□□□ -2
USP47Q96K76 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.58□□□□□ -2
USP47Q96K76 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.58□□□□□ -2
USP47Q96K76 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.58□□□□□ -2
USP47Q96K76 AC069528.1-202ENST00000482888 637 ntBASIC2.58□□□□□ -2
USP47Q96K76 AC079203.1-201ENST00000487972 404 ntBASIC2.58□□□□□ -2
USP47Q96K76 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.58□□□□□ -2
USP47Q96K76 LRRC6P1-201ENST00000532188 885 ntBASIC2.58□□□□□ -2
USP47Q96K76 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.58□□□□□ -2
USP47Q96K76 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.58□□□□□ -2
USP47Q96K76 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.58□□□□□ -2
USP47Q96K76 RPP40P2-201ENST00000603596 712 ntBASIC2.58□□□□□ -2
USP47Q96K76 AC024257.5-201ENST00000612739 531 ntBASIC2.58□□□□□ -2
USP47Q96K76 AC091834.1-201ENST00000614543 472 ntBASIC2.58□□□□□ -2
USP47Q96K76 AC023158.2-201ENST00000614876 543 ntBASIC2.58□□□□□ -2
USP47Q96K76 AC108479.2-201ENST00000617314 601 ntBASIC2.58□□□□□ -2
USP47Q96K76 AL158163.2-201ENST00000619110 700 ntBASIC2.58□□□□□ -2
USP47Q96K76 AC079597.1-201ENST00000624306 508 ntBASIC2.58□□□□□ -2
USP47Q96K76 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
USP47Q96K76 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.57□□□□□ -2
USP47Q96K76 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.57□□□□□ -2
USP47Q96K76 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.57□□□□□ -2
USP47Q96K76 Y_RNA.548-201ENST00000384656 105 ntBASIC2.57□□□□□ -2
USP47Q96K76 AC068533.2-201ENST00000411872 306 ntBASIC2.57□□□□□ -2
USP47Q96K76 AL358453.1-201ENST00000422522 250 ntBASIC2.57□□□□□ -2
USP47Q96K76 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.57□□□□□ -2
USP47Q96K76 ARPC3P1-201ENST00000437218 533 ntBASIC2.57□□□□□ -2
USP47Q96K76 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.57□□□□□ -2
USP47Q96K76 Z96811.1-201ENST00000445880 108 ntBASIC2.57□□□□□ -2
USP47Q96K76 AL049874.1-201ENST00000489560 388 ntBASIC2.57□□□□□ -2
USP47Q96K76 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.57□□□□□ -2
USP47Q96K76 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.57□□□□□ -2
USP47Q96K76 AC104072.1-201ENST00000568817 668 ntBASIC2.57□□□□□ -2
USP47Q96K76 AC020895.1-201ENST00000595362 272 ntBASIC2.57□□□□□ -2
USP47Q96K76 VN1R80P-201ENST00000597126 338 ntBASIC2.57□□□□□ -2
USP47Q96K76 AC112220.2-201ENST00000605513 533 ntBASIC2.57□□□□□ -2
USP47Q96K76 AC004067.1-201ENST00000608733 700 ntBASIC2.57□□□□□ -2
USP47Q96K76 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.57□□□□□ -2
USP47Q96K76 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.57□□□□□ -2
USP47Q96K76 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
USP47Q96K76 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
USP47Q96K76 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
USP47Q96K76 MIR378A-201ENST00000362177 66 ntBASIC2.56□□□□□ -2
USP47Q96K76 RNU1-109P-201ENST00000383960 147 ntBASIC2.56□□□□□ -2
USP47Q96K76 FGF7P8-201ENST00000402994 292 ntBASIC2.56□□□□□ -2
USP47Q96K76 MIR1294-201ENST00000408503 142 ntBASIC2.56□□□□□ -2
USP47Q96K76 RPL7P37-201ENST00000425095 738 ntBASIC2.56□□□□□ -2
USP47Q96K76 AL356867.1-201ENST00000429623 299 ntBASIC2.56□□□□□ -2
USP47Q96K76 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.56□□□□□ -2
USP47Q96K76 MTND4P6-201ENST00000438297 472 ntBASIC2.56□□□□□ -2
USP47Q96K76 AC092798.1-201ENST00000458542 409 ntBASIC2.56□□□□□ -2
USP47Q96K76 RNU6-420P-201ENST00000458780 107 ntBASIC2.56□□□□□ -2
USP47Q96K76 AC009901.1-201ENST00000506703 541 ntBASIC2.56□□□□□ -2
USP47Q96K76 RNU6-528P-201ENST00000516926 100 ntBASIC2.56□□□□□ -2
USP47Q96K76 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.56□□□□□ -2
USP47Q96K76 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.56□□□□□ -2
USP47Q96K76 AC013553.2-201ENST00000604244 589 ntBASIC2.56□□□□□ -2
USP47Q96K76 AC011451.2-201ENST00000604303 598 ntBASIC2.56□□□□□ -2
USP47Q96K76 SNHG22-203ENST00000617833 660 ntBASIC2.56□□□□□ -2
USP47Q96K76 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.56□□□□□ -2
USP47Q96K76 TPMTP2-201ENST00000414372 726 ntBASIC2.55□□□□□ -2
USP47Q96K76 NDUFB4P7-201ENST00000423198 363 ntBASIC2.55□□□□□ -2
USP47Q96K76 TAAR7P-201ENST00000436141 242 ntBASIC2.55□□□□□ -2
USP47Q96K76 UBBP3-201ENST00000445497 241 ntBASIC2.55□□□□□ -2
USP47Q96K76 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.55□□□□□ -2
USP47Q96K76 MTND2P24-201ENST00000453434 806 ntBASIC2.55□□□□□ -2
USP47Q96K76 AC104564.1-201ENST00000493028 407 ntBASIC2.55□□□□□ -2
USP47Q96K76 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.55□□□□□ -2
USP47Q96K76 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.55□□□□□ -2
USP47Q96K76 AC087373.1-201ENST00000524920 491 ntBASIC2.55□□□□□ -2
USP47Q96K76 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.55□□□□□ -2
USP47Q96K76 HMGB1P14-201ENST00000557424 591 ntBASIC2.55□□□□□ -2
USP47Q96K76 AL132657.2-201ENST00000564417 358 ntBASIC2.55□□□□□ -2
USP47Q96K76 MIR3935-201ENST00000583472 104 ntBASIC2.55□□□□□ -2
USP47Q96K76 AL158211.4-201ENST00000606988 584 ntBASIC2.55□□□□□ -2
USP47Q96K76 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.55□□□□□ -2
USP47Q96K76 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.55□□□□□ -2
USP47Q96K76 OR5H6-203ENST00000642105 978 ntBASIC2.55□□□□□ -2
USP47Q96K76 AC005539.1-201ENST00000443768 1479 ntBASIC2.55□□□□□ -2
USP47Q96K76 AC099654.7-201ENST00000635788 2127 ntBASIC2.55□□□□□ -2
USP47Q96K76 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.55□□□□□ -2
USP47Q96K76 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.54□□□□□ -2
USP47Q96K76 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
USP47Q96K76 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.54□□□□□ -2
USP47Q96K76 RNU6-457P-201ENST00000363999 107 ntBASIC2.54□□□□□ -2
USP47Q96K76 RNA5SP190-201ENST00000365222 118 ntBASIC2.54□□□□□ -2
USP47Q96K76 RNU6-952P-201ENST00000391164 108 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms