Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CTHRC1Q96CG8 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
CTHRC1Q96CG8 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.58□□□□□ -1.84
CTHRC1Q96CG8 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.58□□□□□ -1.84
CTHRC1Q96CG8 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CTHRC1Q96CG8 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CTHRC1Q96CG8 AC015813.6-201ENST00000624409 5808 ntBASIC3.58□□□□□ -1.84
CTHRC1Q96CG8 SNORA51.2-201ENST00000364595 132 ntBASIC3.58□□□□□ -1.84
CTHRC1Q96CG8 RNA5SP189-201ENST00000364920 115 ntBASIC3.58□□□□□ -1.84
CTHRC1Q96CG8 Y_RNA.378-201ENST00000365652 113 ntBASIC3.58□□□□□ -1.84
CTHRC1Q96CG8 MIR607-201ENST00000385241 96 ntBASIC3.58□□□□□ -1.84
CTHRC1Q96CG8 MIR134-201ENST00000385258 73 ntBASIC3.58□□□□□ -1.84
CTHRC1Q96CG8 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CTHRC1Q96CG8 AL122016.1-201ENST00000403365 367 ntBASIC3.58□□□□□ -1.84
CTHRC1Q96CG8 SNORA3.3-201ENST00000408712 125 ntBASIC3.58□□□□□ -1.84
CTHRC1Q96CG8 RPS12P24-201ENST00000412619 387 ntBASIC3.58□□□□□ -1.84
CTHRC1Q96CG8 AC080125.1-201ENST00000414888 684 ntBASIC3.58□□□□□ -1.84
CTHRC1Q96CG8 RPL21P66-201ENST00000426566 466 ntBASIC3.58□□□□□ -1.84
CTHRC1Q96CG8 AL356867.1-201ENST00000429623 299 ntBASIC3.58□□□□□ -1.84
CTHRC1Q96CG8 AL591704.1-201ENST00000432574 275 ntBASIC3.58□□□□□ -1.84
CTHRC1Q96CG8 PRDX3P3-201ENST00000447765 522 ntBASIC3.58□□□□□ -1.84
CTHRC1Q96CG8 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.58□□□□□ -1.84
CTHRC1Q96CG8 PPP1R2P5-201ENST00000457256 603 ntBASIC3.58□□□□□ -1.84
CTHRC1Q96CG8 RNU6-1208P-201ENST00000459588 107 ntBASIC3.58□□□□□ -1.84
CTHRC1Q96CG8 RNU6-329P-201ENST00000459618 107 ntBASIC3.58□□□□□ -1.84
CTHRC1Q96CG8 FAM206BP-201ENST00000510179 541 ntBASIC3.58□□□□□ -1.84
CTHRC1Q96CG8 AC005921.1-201ENST00000510589 286 ntBASIC3.58□□□□□ -1.84
CTHRC1Q96CG8 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.58□□□□□ -1.84
CTHRC1Q96CG8 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.58□□□□□ -1.84
CTHRC1Q96CG8 SNORA31.8-201ENST00000516327 108 ntBASIC3.58□□□□□ -1.84
CTHRC1Q96CG8 SCARNA14-201ENST00000516903 136 ntBASIC3.58□□□□□ -1.84
CTHRC1Q96CG8 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.58□□□□□ -1.84
CTHRC1Q96CG8 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.58□□□□□ -1.84
CTHRC1Q96CG8 AC002545.1-201ENST00000592511 181 ntBASIC3.58□□□□□ -1.84
CTHRC1Q96CG8 AC244505.7-201ENST00000599675 272 ntBASIC3.58□□□□□ -1.84
CTHRC1Q96CG8 AC007687.1-201ENST00000602704 304 ntBASIC3.58□□□□□ -1.84
CTHRC1Q96CG8 AL137849.1-201ENST00000604767 169 ntBASIC3.58□□□□□ -1.84
CTHRC1Q96CG8 AC022893.3-201ENST00000607665 437 ntBASIC3.58□□□□□ -1.84
CTHRC1Q96CG8 AC009570.1-201ENST00000609599 745 ntBASIC3.58□□□□□ -1.84
CTHRC1Q96CG8 AC005858.4-201ENST00000623191 700 ntBASIC3.58□□□□□ -1.84
CTHRC1Q96CG8 AC112487.2-201ENST00000637950 304 ntBASIC3.58□□□□□ -1.84
CTHRC1Q96CG8 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.58□□□□□ -1.84
CTHRC1Q96CG8 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CTHRC1Q96CG8 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.58□□□□□ -1.84
CTHRC1Q96CG8 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CTHRC1Q96CG8 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.58□□□□□ -1.84
CTHRC1Q96CG8 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CTHRC1Q96CG8 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.58□□□□□ -1.84
CTHRC1Q96CG8 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.57□□□□□ -1.84
CTHRC1Q96CG8 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CTHRC1Q96CG8 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.57□□□□□ -1.84
CTHRC1Q96CG8 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CTHRC1Q96CG8 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CTHRC1Q96CG8 MIR514A1-201ENST00000385133 98 ntBASIC3.57□□□□□ -1.84
CTHRC1Q96CG8 CISD1P1-201ENST00000393907 327 ntBASIC3.57□□□□□ -1.84
CTHRC1Q96CG8 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.57□□□□□ -1.84
CTHRC1Q96CG8 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.57□□□□□ -1.84
CTHRC1Q96CG8 USP9YP20-201ENST00000419224 558 ntBASIC3.57□□□□□ -1.84
CTHRC1Q96CG8 RPL27AP8-201ENST00000424277 446 ntBASIC3.57□□□□□ -1.84
CTHRC1Q96CG8 TAAR7P-201ENST00000436141 242 ntBASIC3.57□□□□□ -1.84
CTHRC1Q96CG8 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.57□□□□□ -1.84
CTHRC1Q96CG8 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.57□□□□□ -1.84
CTHRC1Q96CG8 RPL31P13-201ENST00000484151 370 ntBASIC3.57□□□□□ -1.84
CTHRC1Q96CG8 RPS15AP34-201ENST00000487776 387 ntBASIC3.57□□□□□ -1.84
CTHRC1Q96CG8 AP001086.1-201ENST00000494882 321 ntBASIC3.57□□□□□ -1.84
CTHRC1Q96CG8 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.57□□□□□ -1.84
CTHRC1Q96CG8 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.57□□□□□ -1.84
CTHRC1Q96CG8 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.57□□□□□ -1.84
CTHRC1Q96CG8 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.57□□□□□ -1.84
CTHRC1Q96CG8 SNORA70.14-201ENST00000516205 110 ntBASIC3.57□□□□□ -1.84
CTHRC1Q96CG8 RNA5SP164-201ENST00000516533 110 ntBASIC3.57□□□□□ -1.84
CTHRC1Q96CG8 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.57□□□□□ -1.84
CTHRC1Q96CG8 CYCSP30-201ENST00000546447 172 ntBASIC3.57□□□□□ -1.84
CTHRC1Q96CG8 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.57□□□□□ -1.84
CTHRC1Q96CG8 AL360157.1-201ENST00000565962 87 ntBASIC3.57□□□□□ -1.84
CTHRC1Q96CG8 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.57□□□□□ -1.84
CTHRC1Q96CG8 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.57□□□□□ -1.84
CTHRC1Q96CG8 MIR4742-201ENST00000581069 85 ntBASIC3.57□□□□□ -1.84
CTHRC1Q96CG8 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.57□□□□□ -1.84
CTHRC1Q96CG8 AC006130.2-201ENST00000586202 326 ntBASIC3.57□□□□□ -1.84
CTHRC1Q96CG8 AC034102.8-201ENST00000615146 484 ntBASIC3.57□□□□□ -1.84
CTHRC1Q96CG8 RMST_7.1-201ENST00000621935 268 ntBASIC3.57□□□□□ -1.84
CTHRC1Q96CG8 AL354798.1-201ENST00000622505 329 ntBASIC3.57□□□□□ -1.84
CTHRC1Q96CG8 FP236240.3-201ENST00000623061 327 ntBASIC3.57□□□□□ -1.84
CTHRC1Q96CG8 TPTEP1-208ENST00000636884 213 ntBASIC3.57□□□□□ -1.84
CTHRC1Q96CG8 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CTHRC1Q96CG8 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CTHRC1Q96CG8 AC121333.1-201ENST00000567488 2709 ntBASIC3.57□□□□□ -1.84
CTHRC1Q96CG8 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 OR4G2P-202ENST00000641004 1759 ntBASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 AC106871.1-201ENST00000568324 3102 ntBASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 RNU6-522P-201ENST00000364497 107 ntBASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 RNU6-434P-201ENST00000384376 107 ntBASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 RNU6-393P-201ENST00000384475 107 ntBASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 RNU6-1148P-201ENST00000410992 104 ntBASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 POLHP1-201ENST00000411806 470 ntBASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms