Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC1.01□□□□□ -2.25
TTC28Q96AY4 RPL26P9-201ENST00000457466 433 ntBASIC1.01□□□□□ -2.25
TTC28Q96AY4 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC1.01□□□□□ -2.25
TTC28Q96AY4 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.01□□□□□ -2.25
TTC28Q96AY4 AC009901.1-201ENST00000506703 541 ntBASIC1.01□□□□□ -2.25
TTC28Q96AY4 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC1.01□□□□□ -2.25
TTC28Q96AY4 MIR5694-201ENST00000581190 76 ntBASIC1.01□□□□□ -2.25
TTC28Q96AY4 MTCO2P22-201ENST00000603246 681 ntBASIC1.01□□□□□ -2.25
TTC28Q96AY4 uc_338.9-201ENST00000617424 182 ntBASIC1.01□□□□□ -2.25
TTC28Q96AY4 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC1.01□□□□□ -2.25
TTC28Q96AY4 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
TTC28Q96AY4 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC1□□□□□ -2.25
TTC28Q96AY4 OR51AB1P-201ENST00000429046 620 ntBASIC1□□□□□ -2.25
TTC28Q96AY4 SYPL1P1-201ENST00000473622 768 ntBASIC1□□□□□ -2.25
TTC28Q96AY4 RNU6-711P-201ENST00000517255 106 ntBASIC1□□□□□ -2.25
TTC28Q96AY4 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC1□□□□□ -2.25
TTC28Q96AY4 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC1□□□□□ -2.25
TTC28Q96AY4 ZNF92P3-201ENST00000596594 954 ntBASIC1□□□□□ -2.25
TTC28Q96AY4 AC068831.7-201ENST00000616954 363 ntBASIC1□□□□□ -2.25
TTC28Q96AY4 RNU6-335P-201ENST00000364563 113 ntBASIC1□□□□□ -2.25
TTC28Q96AY4 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC1□□□□□ -2.25
TTC28Q96AY4 TXNP7-201ENST00000406296 293 ntBASIC1□□□□□ -2.25
TTC28Q96AY4 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1□□□□□ -2.25
TTC28Q96AY4 RPL17P49-201ENST00000443728 411 ntBASIC1□□□□□ -2.25
TTC28Q96AY4 GDI2P2-201ENST00000445131 608 ntBASIC1□□□□□ -2.25
TTC28Q96AY4 RPL21P104-201ENST00000464143 478 ntBASIC1□□□□□ -2.25
TTC28Q96AY4 Z69720.2-201ENST00000624755 279 ntBASIC1□□□□□ -2.25
TTC28Q96AY4 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC1□□□□□ -2.25
TTC28Q96AY4 AC090740.1-201ENST00000623193 2262 ntBASIC1□□□□□ -2.25
TTC28Q96AY4 AC010329.5-201ENST00000623497 2174 ntBASIC1□□□□□ -2.25
TTC28Q96AY4 AC099654.7-201ENST00000635788 2127 ntBASIC1□□□□□ -2.25
TTC28Q96AY4 UBE2V1P9-201ENST00000414760 368 ntBASIC0.99□□□□□ -2.25
TTC28Q96AY4 RPS6P14-201ENST00000425165 719 ntBASIC0.99□□□□□ -2.25
TTC28Q96AY4 AC104629.2-201ENST00000468627 598 ntBASIC0.99□□□□□ -2.25
TTC28Q96AY4 AC006499.2-201ENST00000513470 337 ntBASIC0.99□□□□□ -2.25
TTC28Q96AY4 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC0.99□□□□□ -2.25
TTC28Q96AY4 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC0.99□□□□□ -2.25
TTC28Q96AY4 AC022690.1-201ENST00000526681 550 ntBASIC0.99□□□□□ -2.25
TTC28Q96AY4 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC0.99□□□□□ -2.25
TTC28Q96AY4 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC0.99□□□□□ -2.25
TTC28Q96AY4 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC0.99□□□□□ -2.25
TTC28Q96AY4 AC115085.1-201ENST00000588924 229 ntBASIC0.99□□□□□ -2.25
TTC28Q96AY4 BNIP3P26-201ENST00000600827 554 ntBASIC0.99□□□□□ -2.25
TTC28Q96AY4 DUXAP4-201ENST00000603046 613 ntBASIC0.99□□□□□ -2.25
TTC28Q96AY4 AC138473.1-201ENST00000605717 526 ntBASIC0.99□□□□□ -2.25
TTC28Q96AY4 AC005021.1-201ENST00000608730 355 ntBASIC0.99□□□□□ -2.25
TTC28Q96AY4 AP005212.4-201ENST00000614206 710 ntBASIC0.99□□□□□ -2.25
TTC28Q96AY4 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC0.99□□□□□ -2.25
TTC28Q96AY4 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.99□□□□□ -2.25
TTC28Q96AY4 ZNF37BP-203ENST00000452306 1352 ntBASIC0.99□□□□□ -2.25
TTC28Q96AY4 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
TTC28Q96AY4 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
TTC28Q96AY4 RNU1-109P-201ENST00000383960 147 ntBASIC0.99□□□□□ -2.25
TTC28Q96AY4 SNRPEP4-201ENST00000435815 279 ntBASIC0.99□□□□□ -2.25
TTC28Q96AY4 AL031663.1-201ENST00000437445 219 ntBASIC0.99□□□□□ -2.25
TTC28Q96AY4 NF1P3-201ENST00000457709 450 ntBASIC0.99□□□□□ -2.25
TTC28Q96AY4 SNORD121B-201ENST00000458838 81 ntBASIC0.99□□□□□ -2.25
TTC28Q96AY4 RPL30P14-201ENST00000482744 348 ntBASIC0.99□□□□□ -2.25
TTC28Q96AY4 AC096751.1-202ENST00000502691 1067 ntBASIC0.99□□□□□ -2.25
TTC28Q96AY4 SCARNA1-201ENST00000517138 166 ntBASIC0.99□□□□□ -2.25
TTC28Q96AY4 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC0.99□□□□□ -2.25
TTC28Q96AY4 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.99□□□□□ -2.25
TTC28Q96AY4 AC079148.1-201ENST00000565944 819 ntBASIC0.99□□□□□ -2.25
TTC28Q96AY4 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC0.99□□□□□ -2.25
TTC28Q96AY4 AC008962.1-201ENST00000605729 304 ntBASIC0.99□□□□□ -2.25
TTC28Q96AY4 AC113194.1-201ENST00000606037 500 ntBASIC0.99□□□□□ -2.25
TTC28Q96AY4 AC100821.1-201ENST00000523153 2479 ntBASIC0.99□□□□□ -2.25
TTC28Q96AY4 CENPCP1-201ENST00000533085 2578 ntBASIC0.99□□□□□ -2.25
TTC28Q96AY4 MFSD8-213ENST00000641134 1327 ntBASIC0.99□□□□□ -2.25
TTC28Q96AY4 RNA5SP193-201ENST00000410353 107 ntBASIC0.98□□□□□ -2.25
TTC28Q96AY4 RNU4-65P-201ENST00000410473 140 ntBASIC0.98□□□□□ -2.25
TTC28Q96AY4 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC0.98□□□□□ -2.25
TTC28Q96AY4 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC0.98□□□□□ -2.25
TTC28Q96AY4 NDUFA5P10-201ENST00000432147 357 ntBASIC0.98□□□□□ -2.25
TTC28Q96AY4 AC023512.1-201ENST00000444513 499 ntBASIC0.98□□□□□ -2.25
TTC28Q96AY4 Z77249.1-201ENST00000444622 1175 ntBASIC0.98□□□□□ -2.25
TTC28Q96AY4 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC0.98□□□□□ -2.25
TTC28Q96AY4 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC0.98□□□□□ -2.25
TTC28Q96AY4 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC0.98□□□□□ -2.25
TTC28Q96AY4 COX6CP18-201ENST00000448769 222 ntBASIC0.98□□□□□ -2.25
TTC28Q96AY4 BUD31P2-201ENST00000449374 300 ntBASIC0.98□□□□□ -2.25
TTC28Q96AY4 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC0.98□□□□□ -2.25
TTC28Q96AY4 AL035407.2-201ENST00000454090 378 ntBASIC0.98□□□□□ -2.25
TTC28Q96AY4 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC0.98□□□□□ -2.25
TTC28Q96AY4 RBM43P1-201ENST00000476891 1081 ntBASIC0.98□□□□□ -2.25
TTC28Q96AY4 Y_RNA.700-201ENST00000516806 100 ntBASIC0.98□□□□□ -2.25
TTC28Q96AY4 NBEAP1-201ENST00000554452 979 ntBASIC0.98□□□□□ -2.25
TTC28Q96AY4 AL355810.1-201ENST00000614629 552 ntBASIC0.98□□□□□ -2.25
TTC28Q96AY4 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC0.98□□□□□ -2.25
TTC28Q96AY4 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC0.98□□□□□ -2.25
TTC28Q96AY4 AP000648.3-201ENST00000623539 4507 ntBASIC0.98□□□□□ -2.25
TTC28Q96AY4 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC0.98□□□□□ -2.25
TTC28Q96AY4 RNU6-600P-201ENST00000362524 99 ntBASIC0.98□□□□□ -2.25
TTC28Q96AY4 RNU1-23P-201ENST00000363361 144 ntBASIC0.98□□□□□ -2.25
TTC28Q96AY4 RNU6-997P-201ENST00000384725 107 ntBASIC0.98□□□□□ -2.25
TTC28Q96AY4 RPS4XP3-201ENST00000398541 413 ntBASIC0.98□□□□□ -2.25
TTC28Q96AY4 RNU6-1077P-201ENST00000410506 102 ntBASIC0.98□□□□□ -2.25
TTC28Q96AY4 RNU6-1064P-201ENST00000410626 104 ntBASIC0.98□□□□□ -2.25
TTC28Q96AY4 RPL21P90-201ENST00000415692 466 ntBASIC0.98□□□□□ -2.25
TTC28Q96AY4 LAMTOR3P1-201ENST00000428620 370 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms