Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 FAM60BP-201ENST00000578364 658 ntBASIC0.78□□□□□ -2.28
ALMS1Q8TCU4 AC005498.1-201ENST00000592125 465 ntBASIC0.78□□□□□ -2.28
ALMS1Q8TCU4 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC0.78□□□□□ -2.28
ALMS1Q8TCU4 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
ALMS1Q8TCU4 Y_RNA.258-201ENST00000364613 105 ntBASIC0.78□□□□□ -2.29
ALMS1Q8TCU4 AC007098.1-201ENST00000420122 367 ntBASIC0.78□□□□□ -2.29
ALMS1Q8TCU4 AC098934.3-201ENST00000430450 190 ntBASIC0.78□□□□□ -2.29
ALMS1Q8TCU4 ARL5AP3-201ENST00000439327 386 ntBASIC0.78□□□□□ -2.29
ALMS1Q8TCU4 RNU6-1132P-201ENST00000459214 107 ntBASIC0.78□□□□□ -2.29
ALMS1Q8TCU4 AC025165.5-201ENST00000602802 578 ntBASIC0.78□□□□□ -2.29
ALMS1Q8TCU4 AL445183.3-201ENST00000414168 502 ntBASIC0.77□□□□□ -2.29
ALMS1Q8TCU4 SDAD1P3-201ENST00000427380 333 ntBASIC0.77□□□□□ -2.29
ALMS1Q8TCU4 UBE2V1P13-201ENST00000436983 439 ntBASIC0.77□□□□□ -2.29
ALMS1Q8TCU4 AC093155.1-201ENST00000440164 826 ntBASIC0.77□□□□□ -2.29
ALMS1Q8TCU4 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC0.77□□□□□ -2.29
ALMS1Q8TCU4 RNU7-26P-201ENST00000458980 63 ntBASIC0.77□□□□□ -2.29
ALMS1Q8TCU4 RPL31P41-201ENST00000477967 372 ntBASIC0.77□□□□□ -2.29
ALMS1Q8TCU4 RPS27AP10-201ENST00000496103 208 ntBASIC0.77□□□□□ -2.29
ALMS1Q8TCU4 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC0.77□□□□□ -2.29
ALMS1Q8TCU4 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC0.77□□□□□ -2.29
ALMS1Q8TCU4 AC022690.1-201ENST00000526681 550 ntBASIC0.77□□□□□ -2.29
ALMS1Q8TCU4 CR383656.8-201ENST00000549046 145 ntBASIC0.77□□□□□ -2.29
ALMS1Q8TCU4 AC008127.2-201ENST00000549925 1075 ntBASIC0.77□□□□□ -2.29
ALMS1Q8TCU4 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.77□□□□□ -2.29
ALMS1Q8TCU4 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
ALMS1Q8TCU4 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.77□□□□□ -2.29
ALMS1Q8TCU4 AP002784.2-201ENST00000397300 549 ntBASIC0.77□□□□□ -2.29
ALMS1Q8TCU4 OFD1P12Y-201ENST00000427963 1207 ntBASIC0.77□□□□□ -2.29
ALMS1Q8TCU4 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.77□□□□□ -2.29
ALMS1Q8TCU4 VN1R108P-201ENST00000431580 830 ntBASIC0.77□□□□□ -2.29
ALMS1Q8TCU4 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.77□□□□□ -2.29
ALMS1Q8TCU4 SETP11-201ENST00000473027 690 ntBASIC0.77□□□□□ -2.29
ALMS1Q8TCU4 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC0.77□□□□□ -2.29
ALMS1Q8TCU4 OR5AL2P-201ENST00000532185 920 ntBASIC0.77□□□□□ -2.29
ALMS1Q8TCU4 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
ALMS1Q8TCU4 Y_RNA.471-201ENST00000384312 102 ntBASIC0.77□□□□□ -2.29
ALMS1Q8TCU4 MIR513A1-201ENST00000385138 129 ntBASIC0.77□□□□□ -2.29
ALMS1Q8TCU4 HMGB3P31-201ENST00000413333 595 ntBASIC0.77□□□□□ -2.29
ALMS1Q8TCU4 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC0.77□□□□□ -2.29
ALMS1Q8TCU4 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
ALMS1Q8TCU4 AC092451.2-201ENST00000538746 658 ntBASIC0.77□□□□□ -2.29
ALMS1Q8TCU4 AC021646.1-201ENST00000605469 484 ntBASIC0.77□□□□□ -2.29
ALMS1Q8TCU4 uc_338.12-201ENST00000616344 181 ntBASIC0.77□□□□□ -2.29
ALMS1Q8TCU4 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC0.77□□□□□ -2.29
ALMS1Q8TCU4 CUL4AP1-201ENST00000514750 1863 ntBASIC0.77□□□□□ -2.29
ALMS1Q8TCU4 AL442644.1-201ENST00000454390 3105 ntBASIC0.77□□□□□ -2.29
ALMS1Q8TCU4 Y_RNA.274-201ENST00000364714 101 ntBASIC0.76□□□□□ -2.29
ALMS1Q8TCU4 MIR193B-201ENST00000384907 83 ntBASIC0.76□□□□□ -2.29
ALMS1Q8TCU4 MTCYBP24-201ENST00000420387 1106 ntBASIC0.76□□□□□ -2.29
ALMS1Q8TCU4 AC018630.2-202ENST00000422992 927 ntBASIC0.76□□□□□ -2.29
ALMS1Q8TCU4 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.76□□□□□ -2.29
ALMS1Q8TCU4 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.76□□□□□ -2.29
ALMS1Q8TCU4 LRRC34P2-201ENST00000514850 553 ntBASIC0.76□□□□□ -2.29
ALMS1Q8TCU4 SNORA31.25-201ENST00000517242 134 ntBASIC0.76□□□□□ -2.29
ALMS1Q8TCU4 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC0.76□□□□□ -2.29
ALMS1Q8TCU4 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.76□□□□□ -2.29
ALMS1Q8TCU4 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC0.76□□□□□ -2.29
ALMS1Q8TCU4 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.76□□□□□ -2.29
ALMS1Q8TCU4 AC009541.1-201ENST00000438279 2662 ntBASIC0.76□□□□□ -2.29
ALMS1Q8TCU4 AC068050.1-201ENST00000394891 380 ntBASIC0.76□□□□□ -2.29
ALMS1Q8TCU4 TMEM167AP1-201ENST00000423409 219 ntBASIC0.76□□□□□ -2.29
ALMS1Q8TCU4 AL596276.1-201ENST00000434465 418 ntBASIC0.76□□□□□ -2.29
ALMS1Q8TCU4 AL121601.2-201ENST00000438019 707 ntBASIC0.76□□□□□ -2.29
ALMS1Q8TCU4 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC0.76□□□□□ -2.29
ALMS1Q8TCU4 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC0.76□□□□□ -2.29
ALMS1Q8TCU4 AP005597.4-201ENST00000526762 229 ntBASIC0.76□□□□□ -2.29
ALMS1Q8TCU4 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC0.76□□□□□ -2.29
ALMS1Q8TCU4 RNU1-72P-201ENST00000362976 153 ntBASIC0.76□□□□□ -2.29
ALMS1Q8TCU4 RNU6-203P-201ENST00000384038 104 ntBASIC0.76□□□□□ -2.29
ALMS1Q8TCU4 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
ALMS1Q8TCU4 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC0.76□□□□□ -2.29
ALMS1Q8TCU4 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC0.76□□□□□ -2.29
ALMS1Q8TCU4 MTCO3P46-201ENST00000425787 232 ntBASIC0.76□□□□□ -2.29
ALMS1Q8TCU4 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.76□□□□□ -2.29
ALMS1Q8TCU4 ARL5AP2-201ENST00000444698 533 ntBASIC0.76□□□□□ -2.29
ALMS1Q8TCU4 RPS23P4-201ENST00000487908 423 ntBASIC0.76□□□□□ -2.29
ALMS1Q8TCU4 AP005435.4-201ENST00000529514 284 ntBASIC0.76□□□□□ -2.29
ALMS1Q8TCU4 AC118942.1-201ENST00000529674 1035 ntBASIC0.76□□□□□ -2.29
ALMS1Q8TCU4 AC097655.1-201ENST00000635075 318 ntBASIC0.76□□□□□ -2.29
ALMS1Q8TCU4 AC010487.4-201ENST00000637027 61 ntBASIC0.76□□□□□ -2.29
ALMS1Q8TCU4 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC0.76□□□□□ -2.29
ALMS1Q8TCU4 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
ALMS1Q8TCU4 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
ALMS1Q8TCU4 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC0.75□□□□□ -2.29
ALMS1Q8TCU4 RNU6-955P-201ENST00000410497 104 ntBASIC0.75□□□□□ -2.29
ALMS1Q8TCU4 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC0.75□□□□□ -2.29
ALMS1Q8TCU4 AC096745.1-201ENST00000509945 370 ntBASIC0.75□□□□□ -2.29
ALMS1Q8TCU4 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC0.75□□□□□ -2.29
ALMS1Q8TCU4 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC0.75□□□□□ -2.29
ALMS1Q8TCU4 CBX3P1-201ENST00000325243 554 ntBASIC0.75□□□□□ -2.29
ALMS1Q8TCU4 DEFB108F-201ENST00000344638 222 ntBASIC0.75□□□□□ -2.29
ALMS1Q8TCU4 Y_RNA.294-201ENST00000364916 102 ntBASIC0.75□□□□□ -2.29
ALMS1Q8TCU4 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.75□□□□□ -2.29
ALMS1Q8TCU4 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.75□□□□□ -2.29
ALMS1Q8TCU4 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC0.75□□□□□ -2.29
ALMS1Q8TCU4 AP005902.1-201ENST00000521358 186 ntBASIC0.75□□□□□ -2.29
ALMS1Q8TCU4 DEFB108E-201ENST00000524692 240 ntBASIC0.75□□□□□ -2.29
ALMS1Q8TCU4 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.75□□□□□ -2.29
ALMS1Q8TCU4 RNU4-42P-201ENST00000364738 142 ntBASIC0.75□□□□□ -2.29
ALMS1Q8TCU4 RNU2-41P-201ENST00000410991 178 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms