Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 OR4G1P-203ENST00000641984 1631 ntBASIC4.49□□□□□ -1.69
SMC1BQ8NDV3 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
SMC1BQ8NDV3 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.49□□□□□ -1.69
SMC1BQ8NDV3 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.49□□□□□ -1.69
SMC1BQ8NDV3 ZNF807-201ENST00000328088 1707 ntBASIC4.49□□□□□ -1.69
SMC1BQ8NDV3 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
SMC1BQ8NDV3 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
SMC1BQ8NDV3 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
SMC1BQ8NDV3 AC092326.2-201ENST00000624772 1561 ntBASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 SNORD9-201ENST00000362566 104 ntBASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 RNA5SP374-201ENST00000362939 125 ntBASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 Y_RNA.279-201ENST00000364763 95 ntBASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 RNU6-629P-201ENST00000384061 103 ntBASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 RNU6-1029P-201ENST00000384109 107 ntBASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 RNU6-1181P-201ENST00000384191 106 ntBASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 SNORA24.1-201ENST00000384401 135 ntBASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 MIR3074-201ENST00000384885 81 ntBASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 MIR199A2-201ENST00000385289 110 ntBASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 EI24P1-201ENST00000416584 867 ntBASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 RPL36AP53-201ENST00000432891 316 ntBASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 AC024082.2-201ENST00000434771 238 ntBASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 RANP8-201ENST00000444720 713 ntBASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 CBWD4P-201ENST00000445695 655 ntBASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 AC091951.2-201ENST00000500762 203 ntBASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 RNU4-29P-201ENST00000515943 174 ntBASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 RNU6-507P-201ENST00000516045 100 ntBASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 RNU6-875P-201ENST00000516488 106 ntBASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 RN7SKP219-201ENST00000516825 296 ntBASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 MIR4703-201ENST00000577728 79 ntBASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 RPL12P50-201ENST00000603116 116 ntBASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 AC009994.1-201ENST00000606889 253 ntBASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 MTND4P14-201ENST00000435799 1354 ntBASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
SMC1BQ8NDV3 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.47□□□□□ -1.69
SMC1BQ8NDV3 AL354685.2-201ENST00000448218 1447 ntBASIC4.47□□□□□ -1.69
SMC1BQ8NDV3 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SMC1BQ8NDV3 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SMC1BQ8NDV3 AC007685.1-201ENST00000329806 452 ntBASIC4.47□□□□□ -1.69
SMC1BQ8NDV3 RNU6-7-201ENST00000364784 107 ntBASIC4.47□□□□□ -1.69
SMC1BQ8NDV3 RNU6-8-201ENST00000365467 107 ntBASIC4.47□□□□□ -1.69
SMC1BQ8NDV3 NDUFS5P1-201ENST00000405668 289 ntBASIC4.47□□□□□ -1.69
SMC1BQ8NDV3 RNU6-193P-201ENST00000410977 107 ntBASIC4.47□□□□□ -1.69
SMC1BQ8NDV3 RNU2-41P-201ENST00000410991 178 ntBASIC4.47□□□□□ -1.69
SMC1BQ8NDV3 OR6C66P-201ENST00000414917 930 ntBASIC4.47□□□□□ -1.69
SMC1BQ8NDV3 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.47□□□□□ -1.69
SMC1BQ8NDV3 RPS23P10-201ENST00000416185 486 ntBASIC4.47□□□□□ -1.69
SMC1BQ8NDV3 AC009161.1-201ENST00000417306 376 ntBASIC4.47□□□□□ -1.69
SMC1BQ8NDV3 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.47□□□□□ -1.69
SMC1BQ8NDV3 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.47□□□□□ -1.69
SMC1BQ8NDV3 GAPDHP27-201ENST00000447427 1020 ntBASIC4.47□□□□□ -1.69
SMC1BQ8NDV3 AC010285.1-201ENST00000470580 392 ntBASIC4.47□□□□□ -1.69
SMC1BQ8NDV3 RPS26P15-201ENST00000488067 348 ntBASIC4.47□□□□□ -1.69
SMC1BQ8NDV3 RPL39P36-201ENST00000490784 156 ntBASIC4.47□□□□□ -1.69
SMC1BQ8NDV3 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.47□□□□□ -1.69
SMC1BQ8NDV3 MTCO2P30-201ENST00000503662 364 ntBASIC4.47□□□□□ -1.69
SMC1BQ8NDV3 AC108078.2-201ENST00000510750 236 ntBASIC4.47□□□□□ -1.69
SMC1BQ8NDV3 PHBP14-201ENST00000512887 367 ntBASIC4.47□□□□□ -1.69
SMC1BQ8NDV3 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.47□□□□□ -1.69
SMC1BQ8NDV3 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.47□□□□□ -1.69
SMC1BQ8NDV3 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.47□□□□□ -1.69
SMC1BQ8NDV3 AC008489.1-201ENST00000524271 483 ntBASIC4.47□□□□□ -1.69
SMC1BQ8NDV3 SUB1P1-201ENST00000524415 382 ntBASIC4.47□□□□□ -1.69
SMC1BQ8NDV3 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.47□□□□□ -1.69
SMC1BQ8NDV3 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.47□□□□□ -1.69
SMC1BQ8NDV3 FAM60BP-201ENST00000578364 658 ntBASIC4.47□□□□□ -1.69
SMC1BQ8NDV3 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.47□□□□□ -1.69
SMC1BQ8NDV3 AC018638.8-201ENST00000588755 281 ntBASIC4.47□□□□□ -1.69
SMC1BQ8NDV3 AP001486.3-201ENST00000615334 372 ntBASIC4.47□□□□□ -1.69
SMC1BQ8NDV3 AC010133.1-201ENST00000615809 842 ntBASIC4.47□□□□□ -1.69
SMC1BQ8NDV3 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.47□□□□□ -1.69
SMC1BQ8NDV3 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.47□□□□□ -1.69
SMC1BQ8NDV3 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms