Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 MTCO1P12-201ENST00000414273 1543 ntBASIC4.11□□□□□ -1.75
RNF169Q8NCN4 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
RNF169Q8NCN4 AL645937.1-201ENST00000641739 1652 ntBASIC4.11□□□□□ -1.75
RNF169Q8NCN4 Y_RNA.167-201ENST00000363735 109 ntBASIC4.11□□□□□ -1.75
RNF169Q8NCN4 Y_RNA.326-201ENST00000365176 113 ntBASIC4.11□□□□□ -1.75
RNF169Q8NCN4 RNU4-66P-201ENST00000365199 138 ntBASIC4.11□□□□□ -1.75
RNF169Q8NCN4 SNORD115-7-201ENST00000365306 82 ntBASIC4.11□□□□□ -1.75
RNF169Q8NCN4 Y_RNA.530-201ENST00000384587 101 ntBASIC4.11□□□□□ -1.75
RNF169Q8NCN4 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
RNF169Q8NCN4 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.11□□□□□ -1.75
RNF169Q8NCN4 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.11□□□□□ -1.75
RNF169Q8NCN4 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC4.11□□□□□ -1.75
RNF169Q8NCN4 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.11□□□□□ -1.75
RNF169Q8NCN4 AC011742.1-201ENST00000431448 434 ntBASIC4.11□□□□□ -1.75
RNF169Q8NCN4 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.11□□□□□ -1.75
RNF169Q8NCN4 AL590399.6-201ENST00000446396 307 ntBASIC4.11□□□□□ -1.75
RNF169Q8NCN4 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.11□□□□□ -1.75
RNF169Q8NCN4 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.11□□□□□ -1.75
RNF169Q8NCN4 AC098591.2-201ENST00000510152 315 ntBASIC4.11□□□□□ -1.75
RNF169Q8NCN4 RN7SKP18-201ENST00000516005 275 ntBASIC4.11□□□□□ -1.75
RNF169Q8NCN4 RNA5SP164-201ENST00000516533 110 ntBASIC4.11□□□□□ -1.75
RNF169Q8NCN4 HMGN1P28-201ENST00000521340 364 ntBASIC4.11□□□□□ -1.75
RNF169Q8NCN4 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.11□□□□□ -1.75
RNF169Q8NCN4 OR5B10P-201ENST00000532869 642 ntBASIC4.11□□□□□ -1.75
RNF169Q8NCN4 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.11□□□□□ -1.75
RNF169Q8NCN4 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.11□□□□□ -1.75
RNF169Q8NCN4 MIR5187-201ENST00000583479 76 ntBASIC4.11□□□□□ -1.75
RNF169Q8NCN4 AL133255.1-201ENST00000606374 441 ntBASIC4.11□□□□□ -1.75
RNF169Q8NCN4 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.11□□□□□ -1.75
RNF169Q8NCN4 U3.45-201ENST00000607547 219 ntBASIC4.11□□□□□ -1.75
RNF169Q8NCN4 Y_RNA.812-201ENST00000610788 101 ntBASIC4.11□□□□□ -1.75
RNF169Q8NCN4 PART1_1.1-201ENST00000611761 217 ntBASIC4.11□□□□□ -1.75
RNF169Q8NCN4 AC104237.2-201ENST00000612456 443 ntBASIC4.11□□□□□ -1.75
RNF169Q8NCN4 Y_RNA.784-201ENST00000613803 101 ntBASIC4.11□□□□□ -1.75
RNF169Q8NCN4 Y_RNA.787-201ENST00000616522 101 ntBASIC4.11□□□□□ -1.75
RNF169Q8NCN4 Y_RNA.780-201ENST00000617336 101 ntBASIC4.11□□□□□ -1.75
RNF169Q8NCN4 U73479.1-201ENST00000618062 168 ntBASIC4.11□□□□□ -1.75
RNF169Q8NCN4 Y_RNA.801-201ENST00000619005 101 ntBASIC4.11□□□□□ -1.75
RNF169Q8NCN4 AC025034.2-201ENST00000623264 286 ntBASIC4.11□□□□□ -1.75
RNF169Q8NCN4 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.11□□□□□ -1.75
RNF169Q8NCN4 AC119674.1-207ENST00000641355 633 ntBASIC4.11□□□□□ -1.75
RNF169Q8NCN4 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
RNF169Q8NCN4 FAM35DP-201ENST00000323387 2712 ntBASIC4.11□□□□□ -1.75
RNF169Q8NCN4 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
RNF169Q8NCN4 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.11□□□□□ -1.75
RNF169Q8NCN4 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RNF169Q8NCN4 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RNF169Q8NCN4 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
RNF169Q8NCN4 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RNF169Q8NCN4 AL136964.1-201ENST00000622038 2990 ntBASIC4.11□□□□□ -1.75
RNF169Q8NCN4 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.11□□□□□ -1.75
RNF169Q8NCN4 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RNF169Q8NCN4 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
RNF169Q8NCN4 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RNF169Q8NCN4 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.1□□□□□ -1.75
RNF169Q8NCN4 AL137003.2-201ENST00000606924 2538 ntBASIC4.1□□□□□ -1.75
RNF169Q8NCN4 RNA5SP51-201ENST00000364750 119 ntBASIC4.1□□□□□ -1.75
RNF169Q8NCN4 Y_RNA.419-201ENST00000384041 102 ntBASIC4.1□□□□□ -1.75
RNF169Q8NCN4 SNORA24.1-201ENST00000384401 135 ntBASIC4.1□□□□□ -1.75
RNF169Q8NCN4 RNU6-692P-201ENST00000384496 107 ntBASIC4.1□□□□□ -1.75
RNF169Q8NCN4 MIR199A2-201ENST00000385289 110 ntBASIC4.1□□□□□ -1.75
RNF169Q8NCN4 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
RNF169Q8NCN4 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
RNF169Q8NCN4 AL592114.1-201ENST00000403842 483 ntBASIC4.1□□□□□ -1.75
RNF169Q8NCN4 AL359634.1-202ENST00000404721 284 ntBASIC4.1□□□□□ -1.75
RNF169Q8NCN4 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.1□□□□□ -1.75
RNF169Q8NCN4 RPS12P23-201ENST00000419579 400 ntBASIC4.1□□□□□ -1.75
RNF169Q8NCN4 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.1□□□□□ -1.75
RNF169Q8NCN4 AL451054.2-201ENST00000420896 202 ntBASIC4.1□□□□□ -1.75
RNF169Q8NCN4 AF228730.4-201ENST00000421457 183 ntBASIC4.1□□□□□ -1.75
RNF169Q8NCN4 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.1□□□□□ -1.75
RNF169Q8NCN4 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.1□□□□□ -1.75
RNF169Q8NCN4 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC4.1□□□□□ -1.75
RNF169Q8NCN4 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.1□□□□□ -1.75
RNF169Q8NCN4 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.1□□□□□ -1.75
RNF169Q8NCN4 SNRPFP3-201ENST00000457792 225 ntBASIC4.1□□□□□ -1.75
RNF169Q8NCN4 RNU6-1208P-201ENST00000459588 107 ntBASIC4.1□□□□□ -1.75
RNF169Q8NCN4 RPS15AP36-201ENST00000492022 382 ntBASIC4.1□□□□□ -1.75
RNF169Q8NCN4 AC117522.3-201ENST00000507974 584 ntBASIC4.1□□□□□ -1.75
RNF169Q8NCN4 AC026726.1-201ENST00000512859 601 ntBASIC4.1□□□□□ -1.75
RNF169Q8NCN4 RNA5SP208-201ENST00000516156 78 ntBASIC4.1□□□□□ -1.75
RNF169Q8NCN4 AC103783.1-201ENST00000520506 373 ntBASIC4.1□□□□□ -1.75
RNF169Q8NCN4 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.1□□□□□ -1.75
RNF169Q8NCN4 AL118558.2-201ENST00000556294 238 ntBASIC4.1□□□□□ -1.75
RNF169Q8NCN4 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
RNF169Q8NCN4 BNIP3P25-201ENST00000596023 559 ntBASIC4.1□□□□□ -1.75
RNF169Q8NCN4 AC010680.4-201ENST00000605334 543 ntBASIC4.1□□□□□ -1.75
RNF169Q8NCN4 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.1□□□□□ -1.75
RNF169Q8NCN4 uc_338.34-201ENST00000617467 174 ntBASIC4.1□□□□□ -1.75
RNF169Q8NCN4 SNHG22-203ENST00000617833 660 ntBASIC4.1□□□□□ -1.75
RNF169Q8NCN4 AL357559.1-201ENST00000622228 274 ntBASIC4.1□□□□□ -1.75
RNF169Q8NCN4 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.1□□□□□ -1.75
RNF169Q8NCN4 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.1□□□□□ -1.75
RNF169Q8NCN4 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
RNF169Q8NCN4 AC121333.1-201ENST00000567488 2709 ntBASIC4.1□□□□□ -1.75
RNF169Q8NCN4 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.1□□□□□ -1.75
RNF169Q8NCN4 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.09□□□□□ -1.75
RNF169Q8NCN4 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RNF169Q8NCN4 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RNF169Q8NCN4 MAPK10-373ENST00000641983 6772 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms