Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 TPTE2P4-201ENST00000258589 1605 ntBASIC2.53□□□□□ -2
C9orf40Q8IXQ3 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
C9orf40Q8IXQ3 RNU5E-5P-201ENST00000365379 116 ntBASIC2.53□□□□□ -2
C9orf40Q8IXQ3 MIR181B1-201ENST00000385240 110 ntBASIC2.53□□□□□ -2
C9orf40Q8IXQ3 MIR23A-201ENST00000385245 73 ntBASIC2.53□□□□□ -2
C9orf40Q8IXQ3 MIR325-201ENST00000385260 98 ntBASIC2.53□□□□□ -2
C9orf40Q8IXQ3 AL360182.1-201ENST00000397433 468 ntBASIC2.53□□□□□ -2
C9orf40Q8IXQ3 AL354719.1-201ENST00000406535 843 ntBASIC2.53□□□□□ -2
C9orf40Q8IXQ3 RPL17P12-201ENST00000413391 526 ntBASIC2.53□□□□□ -2
C9orf40Q8IXQ3 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.53□□□□□ -2
C9orf40Q8IXQ3 RPL7P10-201ENST00000417407 739 ntBASIC2.53□□□□□ -2
C9orf40Q8IXQ3 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC2.53□□□□□ -2
C9orf40Q8IXQ3 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.53□□□□□ -2
C9orf40Q8IXQ3 USP12PX-201ENST00000432383 1057 ntBASIC2.53□□□□□ -2
C9orf40Q8IXQ3 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.53□□□□□ -2
C9orf40Q8IXQ3 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.53□□□□□ -2
C9orf40Q8IXQ3 UBE2D3P4-201ENST00000441973 436 ntBASIC2.53□□□□□ -2
C9orf40Q8IXQ3 CBWD4P-201ENST00000445695 655 ntBASIC2.53□□□□□ -2
C9orf40Q8IXQ3 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.53□□□□□ -2
C9orf40Q8IXQ3 AC090525.1-201ENST00000479116 478 ntBASIC2.53□□□□□ -2
C9orf40Q8IXQ3 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.53□□□□□ -2
C9orf40Q8IXQ3 AC098799.2-201ENST00000509466 868 ntBASIC2.53□□□□□ -2
C9orf40Q8IXQ3 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.53□□□□□ -2
C9orf40Q8IXQ3 SNORA31.1-201ENST00000515993 133 ntBASIC2.53□□□□□ -2
C9orf40Q8IXQ3 SNORA31.5-201ENST00000516190 133 ntBASIC2.53□□□□□ -2
C9orf40Q8IXQ3 SNORA9.3-201ENST00000516383 129 ntBASIC2.53□□□□□ -2
C9orf40Q8IXQ3 RNU1-103P-201ENST00000516502 125 ntBASIC2.53□□□□□ -2
C9orf40Q8IXQ3 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.53□□□□□ -2
C9orf40Q8IXQ3 AC022616.6-201ENST00000520479 119 ntBASIC2.53□□□□□ -2
C9orf40Q8IXQ3 AC087373.1-201ENST00000524920 491 ntBASIC2.53□□□□□ -2
C9orf40Q8IXQ3 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.53□□□□□ -2
C9orf40Q8IXQ3 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.53□□□□□ -2
C9orf40Q8IXQ3 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.53□□□□□ -2
C9orf40Q8IXQ3 MIR3146-201ENST00000580367 79 ntBASIC2.53□□□□□ -2
C9orf40Q8IXQ3 AC008088.1-201ENST00000580993 280 ntBASIC2.53□□□□□ -2
C9orf40Q8IXQ3 KC877982.1-201ENST00000602313 470 ntBASIC2.53□□□□□ -2
C9orf40Q8IXQ3 AC121334.2-201ENST00000605387 271 ntBASIC2.53□□□□□ -2
C9orf40Q8IXQ3 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.53□□□□□ -2
C9orf40Q8IXQ3 AC245517.5-201ENST00000611529 162 ntBASIC2.53□□□□□ -2
C9orf40Q8IXQ3 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.53□□□□□ -2
C9orf40Q8IXQ3 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
C9orf40Q8IXQ3 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.53□□□□□ -2
C9orf40Q8IXQ3 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
C9orf40Q8IXQ3 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
C9orf40Q8IXQ3 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
C9orf40Q8IXQ3 SNORA5B-201ENST00000363786 132 ntBASIC2.52□□□□□ -2.01
C9orf40Q8IXQ3 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
C9orf40Q8IXQ3 SNORD116-8-201ENST00000384365 95 ntBASIC2.52□□□□□ -2.01
C9orf40Q8IXQ3 RNY3P9-201ENST00000384727 106 ntBASIC2.52□□□□□ -2.01
C9orf40Q8IXQ3 MT-TH-201ENST00000387441 69 ntBASIC2.52□□□□□ -2.01
C9orf40Q8IXQ3 SNORD115.1-201ENST00000391109 76 ntBASIC2.52□□□□□ -2.01
C9orf40Q8IXQ3 AL513331.1-201ENST00000411908 397 ntBASIC2.52□□□□□ -2.01
C9orf40Q8IXQ3 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.52□□□□□ -2.01
C9orf40Q8IXQ3 SPA17P1-201ENST00000416656 452 ntBASIC2.52□□□□□ -2.01
C9orf40Q8IXQ3 USP9YP13-201ENST00000417797 480 ntBASIC2.52□□□□□ -2.01
C9orf40Q8IXQ3 AL451054.2-201ENST00000420896 202 ntBASIC2.52□□□□□ -2.01
C9orf40Q8IXQ3 HSPE1P1-201ENST00000421494 318 ntBASIC2.52□□□□□ -2.01
C9orf40Q8IXQ3 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.52□□□□□ -2.01
C9orf40Q8IXQ3 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.52□□□□□ -2.01
C9orf40Q8IXQ3 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.52□□□□□ -2.01
C9orf40Q8IXQ3 AC112220.1-201ENST00000434628 355 ntBASIC2.52□□□□□ -2.01
C9orf40Q8IXQ3 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.52□□□□□ -2.01
C9orf40Q8IXQ3 COX6CP12-201ENST00000446748 202 ntBASIC2.52□□□□□ -2.01
C9orf40Q8IXQ3 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.52□□□□□ -2.01
C9orf40Q8IXQ3 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
C9orf40Q8IXQ3 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.52□□□□□ -2.01
C9orf40Q8IXQ3 OR5BM1P-201ENST00000512021 366 ntBASIC2.52□□□□□ -2.01
C9orf40Q8IXQ3 RNU6-826P-201ENST00000516827 104 ntBASIC2.52□□□□□ -2.01
C9orf40Q8IXQ3 MTND2P38-201ENST00000522536 667 ntBASIC2.52□□□□□ -2.01
C9orf40Q8IXQ3 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.52□□□□□ -2.01
C9orf40Q8IXQ3 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.52□□□□□ -2.01
C9orf40Q8IXQ3 AC007115.1-201ENST00000546853 234 ntBASIC2.52□□□□□ -2.01
C9orf40Q8IXQ3 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.52□□□□□ -2.01
C9orf40Q8IXQ3 AC002545.1-201ENST00000592511 181 ntBASIC2.52□□□□□ -2.01
C9orf40Q8IXQ3 AC121247.2-201ENST00000604776 136 ntBASIC2.52□□□□□ -2.01
C9orf40Q8IXQ3 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.52□□□□□ -2.01
C9orf40Q8IXQ3 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.52□□□□□ -2.01
C9orf40Q8IXQ3 AL138880.2-201ENST00000616214 239 ntBASIC2.52□□□□□ -2.01
C9orf40Q8IXQ3 SNHG22-203ENST00000617833 660 ntBASIC2.52□□□□□ -2.01
C9orf40Q8IXQ3 OR5H6-203ENST00000642105 978 ntBASIC2.52□□□□□ -2.01
C9orf40Q8IXQ3 AL365361.1-201ENST00000566942 3481 ntBASIC2.52□□□□□ -2.01
C9orf40Q8IXQ3 AC007785.2-201ENST00000598627 1916 ntBASIC2.52□□□□□ -2.01
C9orf40Q8IXQ3 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
C9orf40Q8IXQ3 MTND4P4-201ENST00000439033 1366 ntBASIC2.51□□□□□ -2.01
C9orf40Q8IXQ3 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
C9orf40Q8IXQ3 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.51□□□□□ -2.01
C9orf40Q8IXQ3 MIR9-1-201ENST00000385198 89 ntBASIC2.51□□□□□ -2.01
C9orf40Q8IXQ3 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.51□□□□□ -2.01
C9orf40Q8IXQ3 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
C9orf40Q8IXQ3 Y_RNA.608-201ENST00000410647 95 ntBASIC2.51□□□□□ -2.01
C9orf40Q8IXQ3 ELOCP17-201ENST00000414751 326 ntBASIC2.51□□□□□ -2.01
C9orf40Q8IXQ3 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.51□□□□□ -2.01
C9orf40Q8IXQ3 AL356583.2-201ENST00000426536 280 ntBASIC2.51□□□□□ -2.01
C9orf40Q8IXQ3 AL512844.2-201ENST00000433990 593 ntBASIC2.51□□□□□ -2.01
C9orf40Q8IXQ3 USP9YP12-201ENST00000450481 570 ntBASIC2.51□□□□□ -2.01
C9orf40Q8IXQ3 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.51□□□□□ -2.01
C9orf40Q8IXQ3 LARP1BP2-201ENST00000486594 519 ntBASIC2.51□□□□□ -2.01
C9orf40Q8IXQ3 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.51□□□□□ -2.01
C9orf40Q8IXQ3 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.51□□□□□ -2.01
C9orf40Q8IXQ3 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms