Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AL021997.2-201ENST00000615674 271 ntBASIC4.24□□□□□ -1.73
TRIM48Q8IWZ4 MIR6891-201ENST00000618788 93 ntBASIC4.24□□□□□ -1.73
TRIM48Q8IWZ4 AC015967.1-201ENST00000619893 476 ntBASIC4.24□□□□□ -1.73
TRIM48Q8IWZ4 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
TRIM48Q8IWZ4 AL158163.1-201ENST00000603915 1649 ntBASIC4.24□□□□□ -1.73
TRIM48Q8IWZ4 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
TRIM48Q8IWZ4 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
TRIM48Q8IWZ4 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
TRIM48Q8IWZ4 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
TRIM48Q8IWZ4 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.24□□□□□ -1.73
TRIM48Q8IWZ4 AC026951.1-201ENST00000559530 2459 ntBASIC4.23□□□□□ -1.73
TRIM48Q8IWZ4 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
TRIM48Q8IWZ4 PNPT1P2-201ENST00000456768 2050 ntBASIC4.23□□□□□ -1.73
TRIM48Q8IWZ4 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM48Q8IWZ4 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
TRIM48Q8IWZ4 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM48Q8IWZ4 ZNF285B-201ENST00000561698 1767 ntBASIC4.23□□□□□ -1.73
TRIM48Q8IWZ4 RNU1-108P-201ENST00000362556 161 ntBASIC4.23□□□□□ -1.73
TRIM48Q8IWZ4 RNU6-266P-201ENST00000364225 107 ntBASIC4.23□□□□□ -1.73
TRIM48Q8IWZ4 RN7SKP227-201ENST00000364445 330 ntBASIC4.23□□□□□ -1.73
TRIM48Q8IWZ4 RNA5SP366-201ENST00000365454 123 ntBASIC4.23□□□□□ -1.73
TRIM48Q8IWZ4 Y_RNA.463-201ENST00000384271 102 ntBASIC4.23□□□□□ -1.73
TRIM48Q8IWZ4 SNORA36C-201ENST00000384289 132 ntBASIC4.23□□□□□ -1.73
TRIM48Q8IWZ4 RNU6-196P-201ENST00000384315 107 ntBASIC4.23□□□□□ -1.73
TRIM48Q8IWZ4 RNU6-331P-201ENST00000384724 107 ntBASIC4.23□□□□□ -1.73
TRIM48Q8IWZ4 RNU6-817P-201ENST00000391083 104 ntBASIC4.23□□□□□ -1.73
TRIM48Q8IWZ4 LAP3P1-201ENST00000403648 294 ntBASIC4.23□□□□□ -1.73
TRIM48Q8IWZ4 AC080125.1-201ENST00000414888 684 ntBASIC4.23□□□□□ -1.73
TRIM48Q8IWZ4 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.23□□□□□ -1.73
TRIM48Q8IWZ4 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.23□□□□□ -1.73
TRIM48Q8IWZ4 AC018865.2-201ENST00000423631 129 ntBASIC4.23□□□□□ -1.73
TRIM48Q8IWZ4 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.23□□□□□ -1.73
TRIM48Q8IWZ4 USP9YP30-201ENST00000430729 455 ntBASIC4.23□□□□□ -1.73
TRIM48Q8IWZ4 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.23□□□□□ -1.73
TRIM48Q8IWZ4 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC4.23□□□□□ -1.73
TRIM48Q8IWZ4 AL359672.1-201ENST00000442302 409 ntBASIC4.23□□□□□ -1.73
TRIM48Q8IWZ4 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.23□□□□□ -1.73
TRIM48Q8IWZ4 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.23□□□□□ -1.73
TRIM48Q8IWZ4 AC087854.1-201ENST00000519706 414 ntBASIC4.23□□□□□ -1.73
TRIM48Q8IWZ4 MRPL49P2-201ENST00000521066 465 ntBASIC4.23□□□□□ -1.73
TRIM48Q8IWZ4 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
TRIM48Q8IWZ4 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.23□□□□□ -1.73
TRIM48Q8IWZ4 AC006157.1-201ENST00000611750 366 ntBASIC4.23□□□□□ -1.73
TRIM48Q8IWZ4 MIR4275-201ENST00000636486 87 ntBASIC4.23□□□□□ -1.73
TRIM48Q8IWZ4 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.23□□□□□ -1.73
TRIM48Q8IWZ4 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
TRIM48Q8IWZ4 AC009812.4-201ENST00000569134 1805 ntBASIC4.23□□□□□ -1.73
TRIM48Q8IWZ4 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM48Q8IWZ4 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
TRIM48Q8IWZ4 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM48Q8IWZ4 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM48Q8IWZ4 AC090337.1-201ENST00000579651 2074 ntBASIC4.22□□□□□ -1.73
TRIM48Q8IWZ4 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM48Q8IWZ4 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
TRIM48Q8IWZ4 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.22□□□□□ -1.73
TRIM48Q8IWZ4 RNU6-1059P-201ENST00000363752 98 ntBASIC4.22□□□□□ -1.73
TRIM48Q8IWZ4 MIR578-201ENST00000384828 96 ntBASIC4.22□□□□□ -1.73
TRIM48Q8IWZ4 MIR568-201ENST00000385036 95 ntBASIC4.22□□□□□ -1.73
TRIM48Q8IWZ4 MRPL42P3-201ENST00000401492 326 ntBASIC4.22□□□□□ -1.73
TRIM48Q8IWZ4 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM48Q8IWZ4 RSL24D1P6-201ENST00000426934 401 ntBASIC4.22□□□□□ -1.73
TRIM48Q8IWZ4 AL451062.2-201ENST00000427515 271 ntBASIC4.22□□□□□ -1.73
TRIM48Q8IWZ4 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM48Q8IWZ4 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.22□□□□□ -1.73
TRIM48Q8IWZ4 RPL12P25-201ENST00000455592 494 ntBASIC4.22□□□□□ -1.73
TRIM48Q8IWZ4 AC084198.1-201ENST00000477747 402 ntBASIC4.22□□□□□ -1.73
TRIM48Q8IWZ4 AC026801.1-201ENST00000497178 464 ntBASIC4.22□□□□□ -1.73
TRIM48Q8IWZ4 VN1R104P-201ENST00000505115 1009 ntBASIC4.22□□□□□ -1.73
TRIM48Q8IWZ4 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM48Q8IWZ4 MTND3P25-201ENST00000509243 135 ntBASIC4.22□□□□□ -1.73
TRIM48Q8IWZ4 AC096745.1-201ENST00000509945 370 ntBASIC4.22□□□□□ -1.73
TRIM48Q8IWZ4 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.22□□□□□ -1.73
TRIM48Q8IWZ4 AC009902.1-201ENST00000519351 183 ntBASIC4.22□□□□□ -1.73
TRIM48Q8IWZ4 AP003122.3-201ENST00000526316 255 ntBASIC4.22□□□□□ -1.73
TRIM48Q8IWZ4 SNRPGP16-201ENST00000533275 226 ntBASIC4.22□□□□□ -1.73
TRIM48Q8IWZ4 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM48Q8IWZ4 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM48Q8IWZ4 AC010653.1-201ENST00000571108 881 ntBASIC4.22□□□□□ -1.73
TRIM48Q8IWZ4 MTND6P33-201ENST00000571794 183 ntBASIC4.22□□□□□ -1.73
TRIM48Q8IWZ4 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
TRIM48Q8IWZ4 BDH2P1-201ENST00000602288 736 ntBASIC4.22□□□□□ -1.73
TRIM48Q8IWZ4 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.22□□□□□ -1.73
TRIM48Q8IWZ4 MIR3653-201ENST00000625572 110 ntBASIC4.22□□□□□ -1.73
TRIM48Q8IWZ4 AC016588.2-201ENST00000632484 3021 ntBASIC4.22□□□□□ -1.73
TRIM48Q8IWZ4 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM48Q8IWZ4 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM48Q8IWZ4 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.22□□□□□ -1.73
TRIM48Q8IWZ4 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM48Q8IWZ4 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.22□□□□□ -1.73
TRIM48Q8IWZ4 Z82217.1-201ENST00000625157 8149 ntBASIC4.22□□□□□ -1.73
TRIM48Q8IWZ4 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM48Q8IWZ4 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.73
TRIM48Q8IWZ4 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.21□□□□□ -1.74
TRIM48Q8IWZ4 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.21□□□□□ -1.74
TRIM48Q8IWZ4 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.21□□□□□ -1.74
TRIM48Q8IWZ4 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC4.21□□□□□ -1.74
TRIM48Q8IWZ4 SNORD62.1-201ENST00000362541 86 ntBASIC4.21□□□□□ -1.74
TRIM48Q8IWZ4 RNU1-132P-201ENST00000364300 164 ntBASIC4.21□□□□□ -1.74
TRIM48Q8IWZ4 RNU6-1032P-201ENST00000384100 107 ntBASIC4.21□□□□□ -1.74
TRIM48Q8IWZ4 RNU6-214P-201ENST00000384130 107 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 163.9 ms