Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 RPL7P26-201ENST00000333817 754 ntBASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 RNU6-960P-201ENST00000364056 120 ntBASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 Y_RNA.367-201ENST00000365544 101 ntBASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 RNU6-74P-201ENST00000384235 107 ntBASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 Y_RNA.481-201ENST00000384373 102 ntBASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 MIR493-201ENST00000385254 89 ntBASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 RPS4XP8-201ENST00000402039 771 ntBASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 CIR1P3-201ENST00000405137 479 ntBASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 NDUFS5P1-201ENST00000405668 289 ntBASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 RNU2-39P-201ENST00000410604 198 ntBASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 AL353193.1-201ENST00000421444 268 ntBASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 NEK4P1-201ENST00000433383 879 ntBASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 RPL23AP83-201ENST00000434984 473 ntBASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 SNRPEP4-201ENST00000435815 279 ntBASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 HMGN2P20-201ENST00000437531 273 ntBASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 AC003071.1-201ENST00000451219 789 ntBASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 AC012181.1-201ENST00000479895 423 ntBASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 AL049830.2-201ENST00000480072 201 ntBASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 AC026427.2-201ENST00000506228 536 ntBASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 AC117522.1-201ENST00000509821 380 ntBASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 AL359273.1-201ENST00000510918 627 ntBASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 SNORA70.16-201ENST00000516390 95 ntBASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 AC022690.1-201ENST00000526681 550 ntBASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 AL512310.1-201ENST00000548639 172 ntBASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 MIR5195-201ENST00000583555 115 ntBASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 AL121992.2-201ENST00000606262 256 ntBASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 AC068944.2-201ENST00000610373 403 ntBASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 AL442067.2-201ENST00000614033 363 ntBASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 AC068831.7-201ENST00000616954 363 ntBASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SCN4BQ8IWT1 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SCN4BQ8IWT1 AL513302.2-201ENST00000562313 1842 ntBASIC3.56□□□□□ -1.84
SCN4BQ8IWT1 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SCN4BQ8IWT1 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.56□□□□□ -1.84
SCN4BQ8IWT1 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
SCN4BQ8IWT1 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.56□□□□□ -1.84
SCN4BQ8IWT1 MIR491-201ENST00000384877 84 ntBASIC3.56□□□□□ -1.84
SCN4BQ8IWT1 MIR591-201ENST00000385290 95 ntBASIC3.56□□□□□ -1.84
SCN4BQ8IWT1 BTF3P7-201ENST00000407097 488 ntBASIC3.56□□□□□ -1.84
SCN4BQ8IWT1 MIR1290-201ENST00000408735 78 ntBASIC3.56□□□□□ -1.84
SCN4BQ8IWT1 U3.42-201ENST00000408746 214 ntBASIC3.56□□□□□ -1.84
SCN4BQ8IWT1 RNU2-9P-201ENST00000410194 145 ntBASIC3.56□□□□□ -1.84
SCN4BQ8IWT1 RN7SKP111-201ENST00000410349 271 ntBASIC3.56□□□□□ -1.84
SCN4BQ8IWT1 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.56□□□□□ -1.84
SCN4BQ8IWT1 RPL36AP6-201ENST00000435770 321 ntBASIC3.56□□□□□ -1.84
SCN4BQ8IWT1 HMGB3P12-201ENST00000438745 556 ntBASIC3.56□□□□□ -1.84
SCN4BQ8IWT1 TXNP1-201ENST00000441872 371 ntBASIC3.56□□□□□ -1.84
SCN4BQ8IWT1 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.56□□□□□ -1.84
SCN4BQ8IWT1 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.56□□□□□ -1.84
SCN4BQ8IWT1 AC027673.1-201ENST00000456245 405 ntBASIC3.56□□□□□ -1.84
SCN4BQ8IWT1 AC126389.1-201ENST00000477436 290 ntBASIC3.56□□□□□ -1.84
SCN4BQ8IWT1 AL049874.1-201ENST00000489560 388 ntBASIC3.56□□□□□ -1.84
SCN4BQ8IWT1 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.56□□□□□ -1.84
SCN4BQ8IWT1 RNU6-718P-201ENST00000516166 105 ntBASIC3.56□□□□□ -1.84
SCN4BQ8IWT1 Y_RNA.693-201ENST00000516641 110 ntBASIC3.56□□□□□ -1.84
SCN4BQ8IWT1 MIR2114-201ENST00000516645 80 ntBASIC3.56□□□□□ -1.84
SCN4BQ8IWT1 HMGB1P6-201ENST00000569046 646 ntBASIC3.56□□□□□ -1.84
SCN4BQ8IWT1 MIR4474-201ENST00000579189 78 ntBASIC3.56□□□□□ -1.84
SCN4BQ8IWT1 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.56□□□□□ -1.84
SCN4BQ8IWT1 AC008962.1-201ENST00000605729 304 ntBASIC3.56□□□□□ -1.84
SCN4BQ8IWT1 AP001330.5-201ENST00000607176 411 ntBASIC3.56□□□□□ -1.84
SCN4BQ8IWT1 AC008536.2-201ENST00000607284 349 ntBASIC3.56□□□□□ -1.84
SCN4BQ8IWT1 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.56□□□□□ -1.84
SCN4BQ8IWT1 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.56□□□□□ -1.84
SCN4BQ8IWT1 AC002076.2-201ENST00000617362 122 ntBASIC3.56□□□□□ -1.84
SCN4BQ8IWT1 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.56□□□□□ -1.84
SCN4BQ8IWT1 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.56□□□□□ -1.84
SCN4BQ8IWT1 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.56□□□□□ -1.84
SCN4BQ8IWT1 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.56□□□□□ -1.84
SCN4BQ8IWT1 Z83843.1-201ENST00000604070 3685 ntBASIC3.56□□□□□ -1.84
SCN4BQ8IWT1 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms