Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC008526.1-201ENST00000509149 338 ntBASIC3.88□□□□□ -1.79
VRK3Q8IV63 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.88□□□□□ -1.79
VRK3Q8IV63 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VRK3Q8IV63 AC016065.2-201ENST00000514530 444 ntBASIC3.88□□□□□ -1.79
VRK3Q8IV63 RNU6-189P-201ENST00000516120 101 ntBASIC3.88□□□□□ -1.79
VRK3Q8IV63 RNU6-685P-201ENST00000517088 95 ntBASIC3.88□□□□□ -1.79
VRK3Q8IV63 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.88□□□□□ -1.79
VRK3Q8IV63 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.88□□□□□ -1.79
VRK3Q8IV63 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.88□□□□□ -1.79
VRK3Q8IV63 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.88□□□□□ -1.79
VRK3Q8IV63 PTP4A1P6-201ENST00000531034 478 ntBASIC3.88□□□□□ -1.79
VRK3Q8IV63 AL133271.1-201ENST00000538229 291 ntBASIC3.88□□□□□ -1.79
VRK3Q8IV63 AC091516.1-201ENST00000549191 703 ntBASIC3.88□□□□□ -1.79
VRK3Q8IV63 AL161670.1-201ENST00000554348 137 ntBASIC3.88□□□□□ -1.79
VRK3Q8IV63 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.88□□□□□ -1.79
VRK3Q8IV63 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.88□□□□□ -1.79
VRK3Q8IV63 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.88□□□□□ -1.79
VRK3Q8IV63 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.88□□□□□ -1.79
VRK3Q8IV63 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.88□□□□□ -1.79
VRK3Q8IV63 AC005014.2-201ENST00000607795 599 ntBASIC3.88□□□□□ -1.79
VRK3Q8IV63 FAM157A-202ENST00000615155 405 ntBASIC3.88□□□□□ -1.79
VRK3Q8IV63 AL731566.2-201ENST00000618971 317 ntBASIC3.88□□□□□ -1.79
VRK3Q8IV63 AL161637.1-201ENST00000622380 412 ntBASIC3.88□□□□□ -1.79
VRK3Q8IV63 FAM91A3P-201ENST00000456826 2544 ntBASIC3.88□□□□□ -1.79
VRK3Q8IV63 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
VRK3Q8IV63 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.88□□□□□ -1.79
VRK3Q8IV63 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VRK3Q8IV63 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.88□□□□□ -1.79
VRK3Q8IV63 AL049641.1-201ENST00000441055 1948 ntBASIC3.87□□□□□ -1.79
VRK3Q8IV63 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
VRK3Q8IV63 AP001486.2-201ENST00000561652 5113 ntBASIC3.87□□□□□ -1.79
VRK3Q8IV63 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.87□□□□□ -1.79
VRK3Q8IV63 Y_RNA.188-201ENST00000363952 111 ntBASIC3.87□□□□□ -1.79
VRK3Q8IV63 RNA5SP515-201ENST00000364570 118 ntBASIC3.87□□□□□ -1.79
VRK3Q8IV63 RNU6-1127P-201ENST00000384580 107 ntBASIC3.87□□□□□ -1.79
VRK3Q8IV63 RNA5SP107-201ENST00000411358 122 ntBASIC3.87□□□□□ -1.79
VRK3Q8IV63 AL391219.1-201ENST00000422570 483 ntBASIC3.87□□□□□ -1.79
VRK3Q8IV63 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.87□□□□□ -1.79
VRK3Q8IV63 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.87□□□□□ -1.79
VRK3Q8IV63 SNAP23P1-201ENST00000433229 246 ntBASIC3.87□□□□□ -1.79
VRK3Q8IV63 RPL7P28-201ENST00000437739 740 ntBASIC3.87□□□□□ -1.79
VRK3Q8IV63 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VRK3Q8IV63 SNORD97-201ENST00000459187 142 ntBASIC3.87□□□□□ -1.79
VRK3Q8IV63 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.87□□□□□ -1.79
VRK3Q8IV63 AC104806.1-201ENST00000508720 308 ntBASIC3.87□□□□□ -1.79
VRK3Q8IV63 RNU6-798P-201ENST00000516912 103 ntBASIC3.87□□□□□ -1.79
VRK3Q8IV63 RNU6-1092P-201ENST00000516955 87 ntBASIC3.87□□□□□ -1.79
VRK3Q8IV63 RNU6-1213P-201ENST00000517075 94 ntBASIC3.87□□□□□ -1.79
VRK3Q8IV63 AC087369.1-201ENST00000520775 996 ntBASIC3.87□□□□□ -1.79
VRK3Q8IV63 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.87□□□□□ -1.79
VRK3Q8IV63 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.87□□□□□ -1.79
VRK3Q8IV63 AL121576.1-201ENST00000556055 276 ntBASIC3.87□□□□□ -1.79
VRK3Q8IV63 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.87□□□□□ -1.79
VRK3Q8IV63 MTCO3P23-201ENST00000561363 289 ntBASIC3.87□□□□□ -1.79
VRK3Q8IV63 NF1P5-201ENST00000588287 448 ntBASIC3.87□□□□□ -1.79
VRK3Q8IV63 AC073539.2-201ENST00000597113 165 ntBASIC3.87□□□□□ -1.79
VRK3Q8IV63 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.87□□□□□ -1.79
VRK3Q8IV63 AC116447.1-201ENST00000613153 453 ntBASIC3.87□□□□□ -1.79
VRK3Q8IV63 AL162373.1-201ENST00000620433 407 ntBASIC3.87□□□□□ -1.79
VRK3Q8IV63 PLCE1P1-201ENST00000622094 305 ntBASIC3.87□□□□□ -1.79
VRK3Q8IV63 MIR6500-201ENST00000622700 86 ntBASIC3.87□□□□□ -1.79
VRK3Q8IV63 AC068724.3-201ENST00000625906 87 ntBASIC3.87□□□□□ -1.79
VRK3Q8IV63 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VRK3Q8IV63 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VRK3Q8IV63 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VRK3Q8IV63 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
VRK3Q8IV63 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
VRK3Q8IV63 PNPT1P2-201ENST00000456768 2050 ntBASIC3.86□□□□□ -1.79
VRK3Q8IV63 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
VRK3Q8IV63 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
VRK3Q8IV63 KPNA2P1-201ENST00000458289 1591 ntBASIC3.86□□□□□ -1.79
VRK3Q8IV63 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.86□□□□□ -1.79
VRK3Q8IV63 AC009229.4-201ENST00000623854 1947 ntBASIC3.86□□□□□ -1.79
VRK3Q8IV63 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
VRK3Q8IV63 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.86□□□□□ -1.79
VRK3Q8IV63 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
VRK3Q8IV63 SNORD3E-201ENST00000362899 217 ntBASIC3.86□□□□□ -1.79
VRK3Q8IV63 RNU6-1287P-201ENST00000362914 107 ntBASIC3.86□□□□□ -1.79
VRK3Q8IV63 Y_RNA.176-201ENST00000363815 109 ntBASIC3.86□□□□□ -1.79
VRK3Q8IV63 RNU6-188P-201ENST00000364207 107 ntBASIC3.86□□□□□ -1.79
VRK3Q8IV63 RNU6-1060P-201ENST00000384664 107 ntBASIC3.86□□□□□ -1.79
VRK3Q8IV63 RNU6-550P-201ENST00000391057 101 ntBASIC3.86□□□□□ -1.79
VRK3Q8IV63 MIR450B-201ENST00000401182 78 ntBASIC3.86□□□□□ -1.79
VRK3Q8IV63 RNU6-847P-201ENST00000411115 108 ntBASIC3.86□□□□□ -1.79
VRK3Q8IV63 AC099336.2-201ENST00000422457 254 ntBASIC3.86□□□□□ -1.79
VRK3Q8IV63 HMGB1P12-201ENST00000438594 598 ntBASIC3.86□□□□□ -1.79
VRK3Q8IV63 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.86□□□□□ -1.79
VRK3Q8IV63 Z98949.2-201ENST00000440996 144 ntBASIC3.86□□□□□ -1.79
VRK3Q8IV63 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.86□□□□□ -1.79
VRK3Q8IV63 RANP8-201ENST00000444720 713 ntBASIC3.86□□□□□ -1.79
VRK3Q8IV63 HSFY6P-201ENST00000445573 403 ntBASIC3.86□□□□□ -1.79
VRK3Q8IV63 Z95327.1-201ENST00000446082 482 ntBASIC3.86□□□□□ -1.79
VRK3Q8IV63 RPS17P13-201ENST00000448974 407 ntBASIC3.86□□□□□ -1.79
VRK3Q8IV63 RPS15AP27-201ENST00000449183 343 ntBASIC3.86□□□□□ -1.79
VRK3Q8IV63 CECR9-201ENST00000453421 199 ntBASIC3.86□□□□□ -1.79
VRK3Q8IV63 AC099560.2-201ENST00000457554 255 ntBASIC3.86□□□□□ -1.79
VRK3Q8IV63 SCARNA18-201ENST00000459004 134 ntBASIC3.86□□□□□ -1.79
VRK3Q8IV63 AC010655.3-201ENST00000478818 450 ntBASIC3.86□□□□□ -1.79
VRK3Q8IV63 AC110792.1-201ENST00000491826 472 ntBASIC3.86□□□□□ -1.79
VRK3Q8IV63 RN7SKP21-201ENST00000516503 220 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms