Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 Z99127.3-201ENST00000448158 395 ntBASIC3.05□□□□□ -1.92
NUP54Q7Z3B4 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.05□□□□□ -1.92
NUP54Q7Z3B4 MTND1P27-201ENST00000451117 902 ntBASIC3.05□□□□□ -1.92
NUP54Q7Z3B4 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.05□□□□□ -1.92
NUP54Q7Z3B4 SNORD97-201ENST00000459187 142 ntBASIC3.05□□□□□ -1.92
NUP54Q7Z3B4 AC233702.1-201ENST00000482905 502 ntBASIC3.05□□□□□ -1.92
NUP54Q7Z3B4 AC110794.1-201ENST00000505816 425 ntBASIC3.05□□□□□ -1.92
NUP54Q7Z3B4 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.05□□□□□ -1.92
NUP54Q7Z3B4 NDUFB4P2-201ENST00000509515 391 ntBASIC3.05□□□□□ -1.92
NUP54Q7Z3B4 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.05□□□□□ -1.92
NUP54Q7Z3B4 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.05□□□□□ -1.92
NUP54Q7Z3B4 RNU2-10P-201ENST00000516375 211 ntBASIC3.05□□□□□ -1.92
NUP54Q7Z3B4 RNA5SP337-201ENST00000517007 109 ntBASIC3.05□□□□□ -1.92
NUP54Q7Z3B4 RN7SKP258-201ENST00000517151 304 ntBASIC3.05□□□□□ -1.92
NUP54Q7Z3B4 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.05□□□□□ -1.92
NUP54Q7Z3B4 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
NUP54Q7Z3B4 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
NUP54Q7Z3B4 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.05□□□□□ -1.92
NUP54Q7Z3B4 AC037471.2-201ENST00000564941 598 ntBASIC3.05□□□□□ -1.92
NUP54Q7Z3B4 AC006504.3-201ENST00000586818 523 ntBASIC3.05□□□□□ -1.92
NUP54Q7Z3B4 AC090578.1-201ENST00000604955 591 ntBASIC3.05□□□□□ -1.92
NUP54Q7Z3B4 AC245008.1-201ENST00000608123 476 ntBASIC3.05□□□□□ -1.92
NUP54Q7Z3B4 uc_338.1-201ENST00000612113 180 ntBASIC3.05□□□□□ -1.92
NUP54Q7Z3B4 UCA1.1-201ENST00000620952 75 ntBASIC3.05□□□□□ -1.92
NUP54Q7Z3B4 FRG1KP-201ENST00000623592 341 ntBASIC3.05□□□□□ -1.92
NUP54Q7Z3B4 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.05□□□□□ -1.92
NUP54Q7Z3B4 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.05□□□□□ -1.92
NUP54Q7Z3B4 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.05□□□□□ -1.92
NUP54Q7Z3B4 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
NUP54Q7Z3B4 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
NUP54Q7Z3B4 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.05□□□□□ -1.92
NUP54Q7Z3B4 MAPK10-266ENST00000641066 6555 ntBASIC3.04□□□□□ -1.92
NUP54Q7Z3B4 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.04□□□□□ -1.92
NUP54Q7Z3B4 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NUP54Q7Z3B4 Y_RNA.51-201ENST00000362725 102 ntBASIC3.04□□□□□ -1.92
NUP54Q7Z3B4 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NUP54Q7Z3B4 FO393413.1-201ENST00000402892 195 ntBASIC3.04□□□□□ -1.92
NUP54Q7Z3B4 RNA5SP492-201ENST00000411330 114 ntBASIC3.04□□□□□ -1.92
NUP54Q7Z3B4 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.04□□□□□ -1.92
NUP54Q7Z3B4 AC245291.1-201ENST00000419501 328 ntBASIC3.04□□□□□ -1.92
NUP54Q7Z3B4 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
NUP54Q7Z3B4 AC098614.2-201ENST00000426040 255 ntBASIC3.04□□□□□ -1.92
NUP54Q7Z3B4 AC010153.1-201ENST00000432862 727 ntBASIC3.04□□□□□ -1.92
NUP54Q7Z3B4 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.04□□□□□ -1.92
NUP54Q7Z3B4 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.04□□□□□ -1.92
NUP54Q7Z3B4 AC009961.2-201ENST00000435771 251 ntBASIC3.04□□□□□ -1.92
NUP54Q7Z3B4 RPL23AP22-201ENST00000437556 453 ntBASIC3.04□□□□□ -1.92
NUP54Q7Z3B4 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.04□□□□□ -1.92
NUP54Q7Z3B4 ATP5C1P1-201ENST00000441945 895 ntBASIC3.04□□□□□ -1.92
NUP54Q7Z3B4 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.04□□□□□ -1.92
NUP54Q7Z3B4 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.04□□□□□ -1.92
NUP54Q7Z3B4 RPS15AP27-201ENST00000449183 343 ntBASIC3.04□□□□□ -1.92
NUP54Q7Z3B4 GAPDHP17-201ENST00000449858 1001 ntBASIC3.04□□□□□ -1.92
NUP54Q7Z3B4 MTCO2P18-201ENST00000457151 658 ntBASIC3.04□□□□□ -1.92
NUP54Q7Z3B4 HMGN1P18-201ENST00000457642 277 ntBASIC3.04□□□□□ -1.92
NUP54Q7Z3B4 RBM43P1-201ENST00000476891 1081 ntBASIC3.04□□□□□ -1.92
NUP54Q7Z3B4 RAP1BP2-201ENST00000478270 544 ntBASIC3.04□□□□□ -1.92
NUP54Q7Z3B4 AL358832.1-201ENST00000497800 389 ntBASIC3.04□□□□□ -1.92
NUP54Q7Z3B4 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NUP54Q7Z3B4 RNU6-927P-201ENST00000516199 100 ntBASIC3.04□□□□□ -1.92
NUP54Q7Z3B4 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.04□□□□□ -1.92
NUP54Q7Z3B4 NDUFB9P3-201ENST00000521269 501 ntBASIC3.04□□□□□ -1.92
NUP54Q7Z3B4 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.04□□□□□ -1.92
NUP54Q7Z3B4 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.04□□□□□ -1.92
NUP54Q7Z3B4 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.04□□□□□ -1.92
NUP54Q7Z3B4 AC137800.2-201ENST00000574375 120 ntBASIC3.04□□□□□ -1.92
NUP54Q7Z3B4 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.04□□□□□ -1.92
NUP54Q7Z3B4 NRBF2P1-201ENST00000587407 859 ntBASIC3.04□□□□□ -1.92
NUP54Q7Z3B4 AC040904.1-201ENST00000590850 223 ntBASIC3.04□□□□□ -1.92
NUP54Q7Z3B4 SRGNP1-201ENST00000603392 451 ntBASIC3.04□□□□□ -1.92
NUP54Q7Z3B4 AL162713.1-201ENST00000604480 262 ntBASIC3.04□□□□□ -1.92
NUP54Q7Z3B4 AL137843.1-201ENST00000605078 385 ntBASIC3.04□□□□□ -1.92
NUP54Q7Z3B4 AC073657.2-201ENST00000605661 303 ntBASIC3.04□□□□□ -1.92
NUP54Q7Z3B4 AC109347.2-201ENST00000610220 349 ntBASIC3.04□□□□□ -1.92
NUP54Q7Z3B4 AC010678.1-201ENST00000614118 713 ntBASIC3.04□□□□□ -1.92
NUP54Q7Z3B4 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.04□□□□□ -1.92
NUP54Q7Z3B4 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.04□□□□□ -1.92
NUP54Q7Z3B4 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
NUP54Q7Z3B4 MTND5P27-201ENST00000428871 1720 ntBASIC3.04□□□□□ -1.92
NUP54Q7Z3B4 CR848007.1-201ENST00000442354 1699 ntBASIC3.04□□□□□ -1.92
NUP54Q7Z3B4 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
NUP54Q7Z3B4 Y_RNA.201-201ENST00000364052 96 ntBASIC3.03□□□□□ -1.92
NUP54Q7Z3B4 SNORA75-201ENST00000384158 137 ntBASIC3.03□□□□□ -1.92
NUP54Q7Z3B4 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.03□□□□□ -1.92
NUP54Q7Z3B4 RNU2-25P-201ENST00000411041 191 ntBASIC3.03□□□□□ -1.92
NUP54Q7Z3B4 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
NUP54Q7Z3B4 ZNF90P2-204ENST00000419323 1075 ntBASIC3.03□□□□□ -1.92
NUP54Q7Z3B4 MTCO2P34-201ENST00000421994 607 ntBASIC3.03□□□□□ -1.92
NUP54Q7Z3B4 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.03□□□□□ -1.92
NUP54Q7Z3B4 MTATP6P30-201ENST00000443540 664 ntBASIC3.03□□□□□ -1.92
NUP54Q7Z3B4 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.03□□□□□ -1.92
NUP54Q7Z3B4 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.03□□□□□ -1.92
NUP54Q7Z3B4 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.03□□□□□ -1.92
NUP54Q7Z3B4 AC091153.1-201ENST00000466297 402 ntBASIC3.03□□□□□ -1.92
NUP54Q7Z3B4 RN7SL807P-201ENST00000470923 297 ntBASIC3.03□□□□□ -1.92
NUP54Q7Z3B4 HSPD1P15-201ENST00000505573 1122 ntBASIC3.03□□□□□ -1.92
NUP54Q7Z3B4 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.03□□□□□ -1.92
NUP54Q7Z3B4 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.03□□□□□ -1.92
NUP54Q7Z3B4 AC113155.1-201ENST00000511141 769 ntBASIC3.03□□□□□ -1.92
NUP54Q7Z3B4 AC022447.1-201ENST00000515358 464 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms