Protein–RNA interactions for Protein: Q6ZT12

UBR3, E3 ubiquitin-protein ligase UBR3, humanhuman

Predictions only

Length 1,888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3Q6ZT12 AP004371.1-201ENST00000525240 214 ntBASIC1.17□□□□□ -2.22
UBR3Q6ZT12 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.17□□□□□ -2.22
UBR3Q6ZT12 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.17□□□□□ -2.22
UBR3Q6ZT12 AL512605.2-201ENST00000592972 256 ntBASIC1.17□□□□□ -2.22
UBR3Q6ZT12 PCNAP1-202ENST00000595299 752 ntBASIC1.17□□□□□ -2.22
UBR3Q6ZT12 AL050343.2-201ENST00000607338 280 ntBASIC1.17□□□□□ -2.22
UBR3Q6ZT12 TEX21P-201ENST00000447107 1476 ntBASIC1.16□□□□□ -2.22
UBR3Q6ZT12 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
UBR3Q6ZT12 AC068050.1-201ENST00000394891 380 ntBASIC1.16□□□□□ -2.22
UBR3Q6ZT12 AP002784.2-201ENST00000397300 549 ntBASIC1.16□□□□□ -2.22
UBR3Q6ZT12 Z86062.1-201ENST00000406773 777 ntBASIC1.16□□□□□ -2.22
UBR3Q6ZT12 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.16□□□□□ -2.22
UBR3Q6ZT12 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
UBR3Q6ZT12 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC1.16□□□□□ -2.22
UBR3Q6ZT12 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC1.16□□□□□ -2.22
UBR3Q6ZT12 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
UBR3Q6ZT12 AC008127.2-201ENST00000549925 1075 ntBASIC1.16□□□□□ -2.22
UBR3Q6ZT12 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
UBR3Q6ZT12 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.16□□□□□ -2.22
UBR3Q6ZT12 AGGF1P5-201ENST00000567900 919 ntBASIC1.16□□□□□ -2.22
UBR3Q6ZT12 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.16□□□□□ -2.22
UBR3Q6ZT12 AC106052.1-201ENST00000608029 497 ntBASIC1.16□□□□□ -2.22
UBR3Q6ZT12 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC1.16□□□□□ -2.22
UBR3Q6ZT12 AC091304.6-201ENST00000619761 202 ntBASIC1.16□□□□□ -2.22
UBR3Q6ZT12 AC008133.2-201ENST00000624540 351 ntBASIC1.16□□□□□ -2.22
UBR3Q6ZT12 FAM157B-203ENST00000639350 358 ntBASIC1.16□□□□□ -2.22
UBR3Q6ZT12 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
UBR3Q6ZT12 SNORA1.3-201ENST00000384676 136 ntBASIC1.16□□□□□ -2.22
UBR3Q6ZT12 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.16□□□□□ -2.22
UBR3Q6ZT12 MTCO3P46-201ENST00000425787 232 ntBASIC1.16□□□□□ -2.22
UBR3Q6ZT12 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.16□□□□□ -2.22
UBR3Q6ZT12 UBE2V1P6-201ENST00000430840 422 ntBASIC1.16□□□□□ -2.22
UBR3Q6ZT12 RNF2P1-201ENST00000442955 1010 ntBASIC1.16□□□□□ -2.22
UBR3Q6ZT12 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.16□□□□□ -2.22
UBR3Q6ZT12 AC114801.2-201ENST00000503825 781 ntBASIC1.16□□□□□ -2.22
UBR3Q6ZT12 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.16□□□□□ -2.22
UBR3Q6ZT12 MTND4LP24-201ENST00000572277 291 ntBASIC1.16□□□□□ -2.22
UBR3Q6ZT12 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.16□□□□□ -2.22
UBR3Q6ZT12 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.16□□□□□ -2.22
UBR3Q6ZT12 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.15□□□□□ -2.22
UBR3Q6ZT12 AC018630.2-201ENST00000534866 2403 ntBASIC1.15□□□□□ -2.23
UBR3Q6ZT12 RNU6-882P-201ENST00000391025 103 ntBASIC1.15□□□□□ -2.23
UBR3Q6ZT12 AL512604.1-201ENST00000404812 257 ntBASIC1.15□□□□□ -2.23
UBR3Q6ZT12 HNRNPDP2-201ENST00000406475 478 ntBASIC1.15□□□□□ -2.23
UBR3Q6ZT12 RNU6-920P-201ENST00000410926 92 ntBASIC1.15□□□□□ -2.23
UBR3Q6ZT12 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.15□□□□□ -2.23
UBR3Q6ZT12 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC1.15□□□□□ -2.23
UBR3Q6ZT12 TPMTP4-201ENST00000450749 678 ntBASIC1.15□□□□□ -2.23
UBR3Q6ZT12 LARP7P4-201ENST00000481075 878 ntBASIC1.15□□□□□ -2.23
UBR3Q6ZT12 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.15□□□□□ -2.23
UBR3Q6ZT12 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.15□□□□□ -2.23
UBR3Q6ZT12 AC109809.1-201ENST00000619665 545 ntBASIC1.15□□□□□ -2.23
UBR3Q6ZT12 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.14□□□□□ -2.23
UBR3Q6ZT12 AL356867.1-201ENST00000429623 299 ntBASIC1.14□□□□□ -2.23
UBR3Q6ZT12 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.14□□□□□ -2.23
UBR3Q6ZT12 NEFMP1-201ENST00000443423 1006 ntBASIC1.14□□□□□ -2.23
UBR3Q6ZT12 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.14□□□□□ -2.23
UBR3Q6ZT12 AC020699.1-201ENST00000505161 445 ntBASIC1.14□□□□□ -2.23
UBR3Q6ZT12 RNU2-19P-201ENST00000517288 84 ntBASIC1.14□□□□□ -2.23
UBR3Q6ZT12 CR383656.8-201ENST00000549046 145 ntBASIC1.14□□□□□ -2.23
UBR3Q6ZT12 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.14□□□□□ -2.23
UBR3Q6ZT12 MIR216A-201ENST00000385063 110 ntBASIC1.14□□□□□ -2.23
UBR3Q6ZT12 AL353689.1-201ENST00000438895 199 ntBASIC1.14□□□□□ -2.23
UBR3Q6ZT12 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC1.14□□□□□ -2.23
UBR3Q6ZT12 AC103833.1-201ENST00000517442 172 ntBASIC1.14□□□□□ -2.23
UBR3Q6ZT12 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.14□□□□□ -2.23
UBR3Q6ZT12 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1.14□□□□□ -2.23
UBR3Q6ZT12 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.14□□□□□ -2.23
UBR3Q6ZT12 AC084373.1-201ENST00000603311 235 ntBASIC1.14□□□□□ -2.23
UBR3Q6ZT12 AC103810.9-201ENST00000606688 112 ntBASIC1.14□□□□□ -2.23
UBR3Q6ZT12 ZNF37BP-203ENST00000452306 1352 ntBASIC1.13□□□□□ -2.23
UBR3Q6ZT12 AC091812.1-201ENST00000432235 1948 ntBASIC1.13□□□□□ -2.23
UBR3Q6ZT12 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
UBR3Q6ZT12 SYPL1P1-201ENST00000473622 768 ntBASIC1.13□□□□□ -2.23
UBR3Q6ZT12 AC015908.1-201ENST00000478739 476 ntBASIC1.13□□□□□ -2.23
UBR3Q6ZT12 PCNAP1-201ENST00000505363 709 ntBASIC1.13□□□□□ -2.23
UBR3Q6ZT12 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.13□□□□□ -2.23
UBR3Q6ZT12 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.13□□□□□ -2.23
UBR3Q6ZT12 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.13□□□□□ -2.23
UBR3Q6ZT12 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
UBR3Q6ZT12 RNU2-21P-201ENST00000410368 188 ntBASIC1.12□□□□□ -2.23
UBR3Q6ZT12 AL133384.1-201ENST00000412744 351 ntBASIC1.12□□□□□ -2.23
UBR3Q6ZT12 UBE2D3P2-201ENST00000424409 445 ntBASIC1.12□□□□□ -2.23
UBR3Q6ZT12 AC005534.2-201ENST00000431047 433 ntBASIC1.12□□□□□ -2.23
UBR3Q6ZT12 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
UBR3Q6ZT12 AC015922.2-201ENST00000435593 184 ntBASIC1.12□□□□□ -2.23
UBR3Q6ZT12 RPS29P28-201ENST00000446439 141 ntBASIC1.12□□□□□ -2.23
UBR3Q6ZT12 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.12□□□□□ -2.23
UBR3Q6ZT12 AL121769.1-201ENST00000469473 401 ntBASIC1.12□□□□□ -2.23
UBR3Q6ZT12 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.12□□□□□ -2.23
UBR3Q6ZT12 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.12□□□□□ -2.23
UBR3Q6ZT12 SNORA31.25-201ENST00000517242 134 ntBASIC1.12□□□□□ -2.23
UBR3Q6ZT12 AC008676.3-201ENST00000521237 435 ntBASIC1.12□□□□□ -2.23
UBR3Q6ZT12 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC1.12□□□□□ -2.23
UBR3Q6ZT12 AP003717.3-201ENST00000544832 1180 ntBASIC1.12□□□□□ -2.23
UBR3Q6ZT12 IMMP1LP2-201ENST00000552954 492 ntBASIC1.12□□□□□ -2.23
UBR3Q6ZT12 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.12□□□□□ -2.23
UBR3Q6ZT12 AC008669.1-201ENST00000565823 2178 ntBASIC1.12□□□□□ -2.23
UBR3Q6ZT12 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC1.12□□□□□ -2.23
UBR3Q6ZT12 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms