Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.74□□□□□ -1.65
RUFY4Q6ZNE9 AC112484.5-201ENST00000624189 228 ntBASIC4.74□□□□□ -1.65
RUFY4Q6ZNE9 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.74□□□□□ -1.65
RUFY4Q6ZNE9 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.74□□□□□ -1.65
RUFY4Q6ZNE9 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
RUFY4Q6ZNE9 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
RUFY4Q6ZNE9 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 AC011266.1-201ENST00000624119 3569 ntBASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 MTCO1P12-201ENST00000414273 1543 ntBASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 MIR369-201ENST00000362155 70 ntBASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 RNU6-562P-201ENST00000362731 107 ntBASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 RNA5SP307-201ENST00000362863 116 ntBASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 RNU6-1188P-201ENST00000363795 107 ntBASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 Y_RNA.197-201ENST00000364004 102 ntBASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 Y_RNA.480-201ENST00000384364 102 ntBASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 MIR606-201ENST00000384851 96 ntBASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 AL391417.1-201ENST00000404100 426 ntBASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 RN7SKP167-201ENST00000411047 285 ntBASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 SNORA74C-2-201ENST00000411179 201 ntBASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 RPS12P24-201ENST00000412619 387 ntBASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 Z82205.1-201ENST00000428456 297 ntBASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 ELOCP24-201ENST00000456370 334 ntBASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 Y_RNA.653-201ENST00000459091 95 ntBASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 AC087588.1-201ENST00000462203 316 ntBASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 HSPE1P6-201ENST00000479457 291 ntBASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 AL132838.2-201ENST00000492041 314 ntBASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 AC099522.1-202ENST00000514718 367 ntBASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 Y_RNA.711-201ENST00000516993 102 ntBASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 AP004371.1-201ENST00000525240 214 ntBASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 CYP4A43P-201ENST00000568156 121 ntBASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 AC006270.2-201ENST00000578523 652 ntBASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 ATP1B3P1-201ENST00000605365 821 ntBASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 DUSP12P1-201ENST00000612874 516 ntBASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 AC034102.8-201ENST00000615146 484 ntBASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 AC131238.1-201ENST00000617135 328 ntBASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 MTND5P10-201ENST00000603719 1809 ntBASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 HSPA8P4-201ENST00000511877 1920 ntBASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 AL133243.3-201ENST00000617415 3004 ntBASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RUFY4Q6ZNE9 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
RUFY4Q6ZNE9 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
RUFY4Q6ZNE9 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RUFY4Q6ZNE9 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
RUFY4Q6ZNE9 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RUFY4Q6ZNE9 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RUFY4Q6ZNE9 MIR124-3-201ENST00000384866 87 ntBASIC4.72□□□□□ -1.65
RUFY4Q6ZNE9 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.72□□□□□ -1.65
RUFY4Q6ZNE9 RN7SKP202-201ENST00000410439 330 ntBASIC4.72□□□□□ -1.65
RUFY4Q6ZNE9 AL513331.1-201ENST00000411908 397 ntBASIC4.72□□□□□ -1.65
RUFY4Q6ZNE9 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.72□□□□□ -1.65
RUFY4Q6ZNE9 AC092809.3-201ENST00000415453 231 ntBASIC4.72□□□□□ -1.65
RUFY4Q6ZNE9 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.72□□□□□ -1.65
RUFY4Q6ZNE9 AL451062.2-201ENST00000427515 271 ntBASIC4.72□□□□□ -1.65
RUFY4Q6ZNE9 ATP5HP2-201ENST00000433885 485 ntBASIC4.72□□□□□ -1.65
RUFY4Q6ZNE9 HLA-N-201ENST00000437516 135 ntBASIC4.72□□□□□ -1.65
RUFY4Q6ZNE9 SNORD108-201ENST00000459332 71 ntBASIC4.72□□□□□ -1.65
RUFY4Q6ZNE9 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.72□□□□□ -1.65
RUFY4Q6ZNE9 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.72□□□□□ -1.65
RUFY4Q6ZNE9 IFITM8P-201ENST00000522529 394 ntBASIC4.72□□□□□ -1.65
RUFY4Q6ZNE9 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.72□□□□□ -1.65
RUFY4Q6ZNE9 AL352979.3-201ENST00000553515 247 ntBASIC4.72□□□□□ -1.65
RUFY4Q6ZNE9 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.72□□□□□ -1.65
RUFY4Q6ZNE9 MIR5692A1-201ENST00000580523 69 ntBASIC4.72□□□□□ -1.65
RUFY4Q6ZNE9 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC4.72□□□□□ -1.65
RUFY4Q6ZNE9 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.72□□□□□ -1.65
RUFY4Q6ZNE9 AC010378.1-201ENST00000619270 362 ntBASIC4.72□□□□□ -1.65
RUFY4Q6ZNE9 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
RUFY4Q6ZNE9 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
RUFY4Q6ZNE9 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
RUFY4Q6ZNE9 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
RUFY4Q6ZNE9 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.71□□□□□ -1.65
RUFY4Q6ZNE9 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.71□□□□□ -1.65
RUFY4Q6ZNE9 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.65
RUFY4Q6ZNE9 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
RUFY4Q6ZNE9 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.71□□□□□ -1.65
RUFY4Q6ZNE9 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 238.3 ms