Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AC090525.1-201ENST00000479116 478 ntBASIC2.8□□□□□ -1.96
RFWD3Q6PCD5 RPL30P14-201ENST00000482744 348 ntBASIC2.8□□□□□ -1.96
RFWD3Q6PCD5 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.8□□□□□ -1.96
RFWD3Q6PCD5 AC112204.1-201ENST00000502591 103 ntBASIC2.8□□□□□ -1.96
RFWD3Q6PCD5 AC009901.1-201ENST00000506703 541 ntBASIC2.8□□□□□ -1.96
RFWD3Q6PCD5 AC105313.1-201ENST00000509121 353 ntBASIC2.8□□□□□ -1.96
RFWD3Q6PCD5 AF131216.2-201ENST00000512316 564 ntBASIC2.8□□□□□ -1.96
RFWD3Q6PCD5 SNORA31.21-201ENST00000517180 77 ntBASIC2.8□□□□□ -1.96
RFWD3Q6PCD5 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.8□□□□□ -1.96
RFWD3Q6PCD5 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.8□□□□□ -1.96
RFWD3Q6PCD5 AL391156.1-201ENST00000554965 554 ntBASIC2.8□□□□□ -1.96
RFWD3Q6PCD5 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.8□□□□□ -1.96
RFWD3Q6PCD5 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
RFWD3Q6PCD5 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.8□□□□□ -1.96
RFWD3Q6PCD5 MIR5697-201ENST00000578045 78 ntBASIC2.8□□□□□ -1.96
RFWD3Q6PCD5 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.8□□□□□ -1.96
RFWD3Q6PCD5 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.8□□□□□ -1.96
RFWD3Q6PCD5 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.8□□□□□ -1.96
RFWD3Q6PCD5 U73023.1-201ENST00000603134 700 ntBASIC2.8□□□□□ -1.96
RFWD3Q6PCD5 AP001330.4-201ENST00000604350 154 ntBASIC2.8□□□□□ -1.96
RFWD3Q6PCD5 OR10AB1P-201ENST00000609613 938 ntBASIC2.8□□□□□ -1.96
RFWD3Q6PCD5 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
RFWD3Q6PCD5 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.8□□□□□ -1.96
RFWD3Q6PCD5 AC012150.2-201ENST00000621300 544 ntBASIC2.8□□□□□ -1.96
RFWD3Q6PCD5 Z69908.1-201ENST00000622603 247 ntBASIC2.8□□□□□ -1.96
RFWD3Q6PCD5 AC025048.6-202ENST00000627667 438 ntBASIC2.8□□□□□ -1.96
RFWD3Q6PCD5 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.79□□□□□ -1.96
RFWD3Q6PCD5 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.79□□□□□ -1.96
RFWD3Q6PCD5 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.79□□□□□ -1.96
RFWD3Q6PCD5 AL513185.3-201ENST00000433335 1300 ntBASIC2.79□□□□□ -1.96
RFWD3Q6PCD5 MIR26A1-201ENST00000362205 77 ntBASIC2.79□□□□□ -1.96
RFWD3Q6PCD5 Y_RNA.77-201ENST00000362962 107 ntBASIC2.79□□□□□ -1.96
RFWD3Q6PCD5 U3.4-201ENST00000363352 213 ntBASIC2.79□□□□□ -1.96
RFWD3Q6PCD5 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
RFWD3Q6PCD5 RNU6-533P-201ENST00000384144 107 ntBASIC2.79□□□□□ -1.96
RFWD3Q6PCD5 SNORD115.1-201ENST00000391109 76 ntBASIC2.79□□□□□ -1.96
RFWD3Q6PCD5 RPS20P2-201ENST00000402520 389 ntBASIC2.79□□□□□ -1.96
RFWD3Q6PCD5 FAT1P1-201ENST00000406588 507 ntBASIC2.79□□□□□ -1.96
RFWD3Q6PCD5 RPL19P1-201ENST00000411635 428 ntBASIC2.79□□□□□ -1.96
RFWD3Q6PCD5 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.79□□□□□ -1.96
RFWD3Q6PCD5 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.79□□□□□ -1.96
RFWD3Q6PCD5 AC063976.3-201ENST00000426849 329 ntBASIC2.79□□□□□ -1.96
RFWD3Q6PCD5 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.79□□□□□ -1.96
RFWD3Q6PCD5 AC024082.2-201ENST00000434771 238 ntBASIC2.79□□□□□ -1.96
RFWD3Q6PCD5 AC090774.1-201ENST00000435925 246 ntBASIC2.79□□□□□ -1.96
RFWD3Q6PCD5 RPL35AP22-201ENST00000436855 335 ntBASIC2.79□□□□□ -1.96
RFWD3Q6PCD5 AL590365.1-201ENST00000450788 243 ntBASIC2.79□□□□□ -1.96
RFWD3Q6PCD5 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.79□□□□□ -1.96
RFWD3Q6PCD5 RPL23AP41-201ENST00000484754 458 ntBASIC2.79□□□□□ -1.96
RFWD3Q6PCD5 AC117522.2-201ENST00000510049 657 ntBASIC2.79□□□□□ -1.96
RFWD3Q6PCD5 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.79□□□□□ -1.96
RFWD3Q6PCD5 RNU6-201P-201ENST00000517100 61 ntBASIC2.79□□□□□ -1.96
RFWD3Q6PCD5 HMGB1P41-201ENST00000520234 440 ntBASIC2.79□□□□□ -1.96
RFWD3Q6PCD5 AC060788.1-201ENST00000521318 469 ntBASIC2.79□□□□□ -1.96
RFWD3Q6PCD5 HMGN1P28-201ENST00000521340 364 ntBASIC2.79□□□□□ -1.96
RFWD3Q6PCD5 AP001804.3-201ENST00000525146 880 ntBASIC2.79□□□□□ -1.96
RFWD3Q6PCD5 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.79□□□□□ -1.96
RFWD3Q6PCD5 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.79□□□□□ -1.96
RFWD3Q6PCD5 AC004486.1-201ENST00000546846 233 ntBASIC2.79□□□□□ -1.96
RFWD3Q6PCD5 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.79□□□□□ -1.96
RFWD3Q6PCD5 AC068790.3-201ENST00000602988 553 ntBASIC2.79□□□□□ -1.96
RFWD3Q6PCD5 AL158063.1-201ENST00000615349 536 ntBASIC2.79□□□□□ -1.96
RFWD3Q6PCD5 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
RFWD3Q6PCD5 AC104010.1-201ENST00000616889 150 ntBASIC2.79□□□□□ -1.96
RFWD3Q6PCD5 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.79□□□□□ -1.96
RFWD3Q6PCD5 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
RFWD3Q6PCD5 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.79□□□□□ -1.96
RFWD3Q6PCD5 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
RFWD3Q6PCD5 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
RFWD3Q6PCD5 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.78□□□□□ -1.96
RFWD3Q6PCD5 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.78□□□□□ -1.96
RFWD3Q6PCD5 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
RFWD3Q6PCD5 FTLP6-201ENST00000355274 422 ntBASIC2.78□□□□□ -1.96
RFWD3Q6PCD5 RNU4-40P-201ENST00000364351 143 ntBASIC2.78□□□□□ -1.96
RFWD3Q6PCD5 RNU4-91P-201ENST00000364778 135 ntBASIC2.78□□□□□ -1.96
RFWD3Q6PCD5 MIR34A-201ENST00000385130 110 ntBASIC2.78□□□□□ -1.96
RFWD3Q6PCD5 MIR9-1-201ENST00000385198 89 ntBASIC2.78□□□□□ -1.96
RFWD3Q6PCD5 RNU6-754P-201ENST00000391166 107 ntBASIC2.78□□□□□ -1.96
RFWD3Q6PCD5 UBE2V1P2-201ENST00000397758 440 ntBASIC2.78□□□□□ -1.96
RFWD3Q6PCD5 AC078974.1-201ENST00000411597 223 ntBASIC2.78□□□□□ -1.96
RFWD3Q6PCD5 SEPT2P1-201ENST00000419651 180 ntBASIC2.78□□□□□ -1.96
RFWD3Q6PCD5 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.78□□□□□ -1.96
RFWD3Q6PCD5 AC019097.1-201ENST00000424783 735 ntBASIC2.78□□□□□ -1.96
RFWD3Q6PCD5 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.78□□□□□ -1.96
RFWD3Q6PCD5 AC236972.1-201ENST00000433225 199 ntBASIC2.78□□□□□ -1.96
RFWD3Q6PCD5 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.78□□□□□ -1.96
RFWD3Q6PCD5 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.78□□□□□ -1.96
RFWD3Q6PCD5 RPL22P17-201ENST00000438729 315 ntBASIC2.78□□□□□ -1.96
RFWD3Q6PCD5 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.78□□□□□ -1.96
RFWD3Q6PCD5 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.78□□□□□ -1.96
RFWD3Q6PCD5 AP000936.2-201ENST00000447151 681 ntBASIC2.78□□□□□ -1.96
RFWD3Q6PCD5 TPT1P14-201ENST00000448018 505 ntBASIC2.78□□□□□ -1.96
RFWD3Q6PCD5 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.78□□□□□ -1.96
RFWD3Q6PCD5 SNRPGP9-201ENST00000456025 225 ntBASIC2.78□□□□□ -1.96
RFWD3Q6PCD5 SNRPFP4-201ENST00000456366 242 ntBASIC2.78□□□□□ -1.96
RFWD3Q6PCD5 RNA5SP269-201ENST00000459032 137 ntBASIC2.78□□□□□ -1.96
RFWD3Q6PCD5 AC008571.1-201ENST00000467232 300 ntBASIC2.78□□□□□ -1.96
RFWD3Q6PCD5 AC055855.1-201ENST00000489563 579 ntBASIC2.78□□□□□ -1.96
RFWD3Q6PCD5 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.78□□□□□ -1.96
RFWD3Q6PCD5 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms