Protein–RNA interactions for Protein: Q53EP0

FNDC3B, Fibronectin type III domain-containing protein 3B, humanhuman

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3BQ53EP0 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
FNDC3BQ53EP0 HMGB1P30-201ENST00000492455 606 ntBASIC4.26□□□□□ -1.73
FNDC3BQ53EP0 AC104164.2-201ENST00000496953 495 ntBASIC4.26□□□□□ -1.73
FNDC3BQ53EP0 AC008716.1-201ENST00000511084 513 ntBASIC4.26□□□□□ -1.73
FNDC3BQ53EP0 RNU6-277P-201ENST00000516272 106 ntBASIC4.26□□□□□ -1.73
FNDC3BQ53EP0 RNU6-1069P-201ENST00000516612 133 ntBASIC4.26□□□□□ -1.73
FNDC3BQ53EP0 RNU6-566P-201ENST00000516790 107 ntBASIC4.26□□□□□ -1.73
FNDC3BQ53EP0 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.26□□□□□ -1.73
FNDC3BQ53EP0 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.26□□□□□ -1.73
FNDC3BQ53EP0 MIR4790-201ENST00000577799 79 ntBASIC4.26□□□□□ -1.73
FNDC3BQ53EP0 MIR1254-2-201ENST00000579553 63 ntBASIC4.26□□□□□ -1.73
FNDC3BQ53EP0 MIR3672-201ENST00000584290 82 ntBASIC4.26□□□□□ -1.73
FNDC3BQ53EP0 MIR5692C1-201ENST00000585309 91 ntBASIC4.26□□□□□ -1.73
FNDC3BQ53EP0 AC073539.2-201ENST00000597113 165 ntBASIC4.26□□□□□ -1.73
FNDC3BQ53EP0 AC113139.1-201ENST00000605049 239 ntBASIC4.26□□□□□ -1.73
FNDC3BQ53EP0 AL031601.2-202ENST00000622650 282 ntBASIC4.26□□□□□ -1.73
FNDC3BQ53EP0 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.26□□□□□ -1.73
FNDC3BQ53EP0 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
FNDC3BQ53EP0 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
FNDC3BQ53EP0 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
FNDC3BQ53EP0 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
FNDC3BQ53EP0 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
FNDC3BQ53EP0 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.26□□□□□ -1.73
FNDC3BQ53EP0 RLIMP1-201ENST00000339626 1680 ntBASIC4.26□□□□□ -1.73
FNDC3BQ53EP0 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
FNDC3BQ53EP0 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
FNDC3BQ53EP0 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
FNDC3BQ53EP0 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
FNDC3BQ53EP0 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
FNDC3BQ53EP0 RNA5SP388-201ENST00000362584 119 ntBASIC4.25□□□□□ -1.73
FNDC3BQ53EP0 RNU6-1303P-201ENST00000364841 107 ntBASIC4.25□□□□□ -1.73
FNDC3BQ53EP0 RN7SKP167-201ENST00000411047 285 ntBASIC4.25□□□□□ -1.73
FNDC3BQ53EP0 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.25□□□□□ -1.73
FNDC3BQ53EP0 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.25□□□□□ -1.73
FNDC3BQ53EP0 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.25□□□□□ -1.73
FNDC3BQ53EP0 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.25□□□□□ -1.73
FNDC3BQ53EP0 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.25□□□□□ -1.73
FNDC3BQ53EP0 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.25□□□□□ -1.73
FNDC3BQ53EP0 Z82210.1-201ENST00000440037 231 ntBASIC4.25□□□□□ -1.73
FNDC3BQ53EP0 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.25□□□□□ -1.73
FNDC3BQ53EP0 FABP5P15-201ENST00000453566 214 ntBASIC4.25□□□□□ -1.73
FNDC3BQ53EP0 RNA5SP246-201ENST00000458909 119 ntBASIC4.25□□□□□ -1.73
FNDC3BQ53EP0 MTND4P17-201ENST00000470444 350 ntBASIC4.25□□□□□ -1.73
FNDC3BQ53EP0 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.25□□□□□ -1.73
FNDC3BQ53EP0 AC069113.1-201ENST00000517763 267 ntBASIC4.25□□□□□ -1.73
FNDC3BQ53EP0 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.25□□□□□ -1.73
FNDC3BQ53EP0 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.25□□□□□ -1.73
FNDC3BQ53EP0 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.25□□□□□ -1.73
FNDC3BQ53EP0 AC138761.3-201ENST00000579993 334 ntBASIC4.25□□□□□ -1.73
FNDC3BQ53EP0 AL356055.1-201ENST00000602528 446 ntBASIC4.25□□□□□ -1.73
FNDC3BQ53EP0 AC002044.1-201ENST00000606707 158 ntBASIC4.25□□□□□ -1.73
FNDC3BQ53EP0 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.25□□□□□ -1.73
FNDC3BQ53EP0 AC140113.4-201ENST00000622087 222 ntBASIC4.25□□□□□ -1.73
FNDC3BQ53EP0 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
FNDC3BQ53EP0 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.25□□□□□ -1.73
FNDC3BQ53EP0 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.25□□□□□ -1.73
FNDC3BQ53EP0 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
FNDC3BQ53EP0 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
FNDC3BQ53EP0 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
FNDC3BQ53EP0 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.24□□□□□ -1.73
FNDC3BQ53EP0 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
FNDC3BQ53EP0 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
FNDC3BQ53EP0 RNU6-266P-201ENST00000364225 107 ntBASIC4.24□□□□□ -1.73
FNDC3BQ53EP0 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
FNDC3BQ53EP0 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
FNDC3BQ53EP0 Y_RNA.387-201ENST00000383918 102 ntBASIC4.24□□□□□ -1.73
FNDC3BQ53EP0 RNU6-1011P-201ENST00000384668 107 ntBASIC4.24□□□□□ -1.73
FNDC3BQ53EP0 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
FNDC3BQ53EP0 MIR548F5-201ENST00000408421 86 ntBASIC4.24□□□□□ -1.73
FNDC3BQ53EP0 RN7SKP27-201ENST00000410684 333 ntBASIC4.24□□□□□ -1.73
FNDC3BQ53EP0 AC074085.1-201ENST00000413598 418 ntBASIC4.24□□□□□ -1.73
FNDC3BQ53EP0 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.24□□□□□ -1.73
FNDC3BQ53EP0 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC4.24□□□□□ -1.73
FNDC3BQ53EP0 YPEL5P1-201ENST00000419731 367 ntBASIC4.24□□□□□ -1.73
FNDC3BQ53EP0 RBMY1KP-201ENST00000423480 476 ntBASIC4.24□□□□□ -1.73
FNDC3BQ53EP0 RPL7P2-201ENST00000427639 268 ntBASIC4.24□□□□□ -1.73
FNDC3BQ53EP0 AC236972.2-201ENST00000434979 310 ntBASIC4.24□□□□□ -1.73
FNDC3BQ53EP0 NDUFB4P6-201ENST00000436819 366 ntBASIC4.24□□□□□ -1.73
FNDC3BQ53EP0 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.24□□□□□ -1.73
FNDC3BQ53EP0 RANP8-201ENST00000444720 713 ntBASIC4.24□□□□□ -1.73
FNDC3BQ53EP0 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
FNDC3BQ53EP0 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.24□□□□□ -1.73
FNDC3BQ53EP0 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC4.24□□□□□ -1.73
FNDC3BQ53EP0 AC117503.1-201ENST00000472241 394 ntBASIC4.24□□□□□ -1.73
FNDC3BQ53EP0 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.24□□□□□ -1.73
FNDC3BQ53EP0 RPL30P5-201ENST00000494923 336 ntBASIC4.24□□□□□ -1.73
FNDC3BQ53EP0 HMGN1P13-201ENST00000505795 138 ntBASIC4.24□□□□□ -1.73
FNDC3BQ53EP0 RNU6-1332P-201ENST00000516666 104 ntBASIC4.24□□□□□ -1.73
FNDC3BQ53EP0 RNA5SP165-201ENST00000517142 115 ntBASIC4.24□□□□□ -1.73
FNDC3BQ53EP0 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.24□□□□□ -1.73
FNDC3BQ53EP0 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.24□□□□□ -1.73
FNDC3BQ53EP0 AP003122.3-201ENST00000526316 255 ntBASIC4.24□□□□□ -1.73
FNDC3BQ53EP0 AC084851.1-201ENST00000529105 249 ntBASIC4.24□□□□□ -1.73
FNDC3BQ53EP0 MIR4286-201ENST00000580651 93 ntBASIC4.24□□□□□ -1.73
FNDC3BQ53EP0 AC019278.1-201ENST00000623516 479 ntBASIC4.24□□□□□ -1.73
FNDC3BQ53EP0 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC4.24□□□□□ -1.73
FNDC3BQ53EP0 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
FNDC3BQ53EP0 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.24□□□□□ -1.73
FNDC3BQ53EP0 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.24□□□□□ -1.73
FNDC3BQ53EP0 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms