Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC1.34□□□□□ -2.19
CCDC58Q4VC31 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.34□□□□□ -2.19
CCDC58Q4VC31 AL031274.2-201ENST00000599419 203 ntBASIC1.34□□□□□ -2.19
CCDC58Q4VC31 AL022067.1-201ENST00000602426 454 ntBASIC1.34□□□□□ -2.19
CCDC58Q4VC31 AC009318.2-201ENST00000610917 651 ntBASIC1.34□□□□□ -2.19
CCDC58Q4VC31 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.34□□□□□ -2.19
CCDC58Q4VC31 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC1.33□□□□□ -2.2
CCDC58Q4VC31 MIR1304-201ENST00000408243 91 ntBASIC1.33□□□□□ -2.2
CCDC58Q4VC31 RPL30P13-201ENST00000418873 348 ntBASIC1.33□□□□□ -2.2
CCDC58Q4VC31 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.33□□□□□ -2.2
CCDC58Q4VC31 AC092757.1-201ENST00000467293 467 ntBASIC1.33□□□□□ -2.2
CCDC58Q4VC31 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.33□□□□□ -2.2
CCDC58Q4VC31 AC068587.2-201ENST00000478386 781 ntBASIC1.33□□□□□ -2.2
CCDC58Q4VC31 SSR3-208ENST00000496050 579 ntTSL 4 BASIC1.33□□□□□ -2.2
CCDC58Q4VC31 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.33□□□□□ -2.2
CCDC58Q4VC31 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.33□□□□□ -2.2
CCDC58Q4VC31 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
CCDC58Q4VC31 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.33□□□□□ -2.2
CCDC58Q4VC31 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.33□□□□□ -2.2
CCDC58Q4VC31 AP000403.1-201ENST00000603349 851 ntBASIC1.33□□□□□ -2.2
CCDC58Q4VC31 AC024595.1-201ENST00000623088 387 ntBASIC1.33□□□□□ -2.2
CCDC58Q4VC31 AC009950.2-201ENST00000636548 183 ntBASIC1.33□□□□□ -2.2
CCDC58Q4VC31 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
CCDC58Q4VC31 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
CCDC58Q4VC31 SNORD114-1-201ENST00000362705 72 ntBASIC1.32□□□□□ -2.2
CCDC58Q4VC31 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
CCDC58Q4VC31 RNU6-217P-201ENST00000384164 104 ntBASIC1.32□□□□□ -2.2
CCDC58Q4VC31 MIR517C-201ENST00000385103 95 ntBASIC1.32□□□□□ -2.2
CCDC58Q4VC31 SNRPEP2-201ENST00000397592 279 ntBASIC1.32□□□□□ -2.2
CCDC58Q4VC31 NDUFS5P1-201ENST00000405668 289 ntBASIC1.32□□□□□ -2.2
CCDC58Q4VC31 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.32□□□□□ -2.2
CCDC58Q4VC31 BX276092.3-201ENST00000424182 230 ntBASIC1.32□□□□□ -2.2
CCDC58Q4VC31 RPL26P6-201ENST00000440913 438 ntBASIC1.32□□□□□ -2.2
CCDC58Q4VC31 BNIP3P2-201ENST00000441221 577 ntBASIC1.32□□□□□ -2.2
CCDC58Q4VC31 PIGFP3-201ENST00000441918 722 ntBASIC1.32□□□□□ -2.2
CCDC58Q4VC31 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.32□□□□□ -2.2
CCDC58Q4VC31 AP1S2P1-201ENST00000457344 379 ntBASIC1.32□□□□□ -2.2
CCDC58Q4VC31 AC114801.2-201ENST00000503825 781 ntBASIC1.32□□□□□ -2.2
CCDC58Q4VC31 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CCDC58Q4VC31 RNA5SP61-201ENST00000516453 100 ntBASIC1.32□□□□□ -2.2
CCDC58Q4VC31 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.32□□□□□ -2.2
CCDC58Q4VC31 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.32□□□□□ -2.2
CCDC58Q4VC31 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.32□□□□□ -2.2
CCDC58Q4VC31 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.32□□□□□ -2.2
CCDC58Q4VC31 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.32□□□□□ -2.2
CCDC58Q4VC31 AC138473.1-201ENST00000605717 526 ntBASIC1.32□□□□□ -2.2
CCDC58Q4VC31 AC022202.1-201ENST00000613515 211 ntBASIC1.32□□□□□ -2.2
CCDC58Q4VC31 SCARNA15.3-201ENST00000626315 122 ntBASIC1.32□□□□□ -2.2
CCDC58Q4VC31 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC1.32□□□□□ -2.2
CCDC58Q4VC31 SCARNA4.1-201ENST00000628597 123 ntBASIC1.32□□□□□ -2.2
CCDC58Q4VC31 Z99571.1-201ENST00000636677 394 ntBASIC1.32□□□□□ -2.2
CCDC58Q4VC31 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
CCDC58Q4VC31 MTND4P23-201ENST00000447723 1363 ntBASIC1.32□□□□□ -2.2
CCDC58Q4VC31 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.32□□□□□ -2.2
CCDC58Q4VC31 U8.2-201ENST00000363156 134 ntBASIC1.31□□□□□ -2.2
CCDC58Q4VC31 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CCDC58Q4VC31 RNU6-338P-201ENST00000383888 105 ntBASIC1.31□□□□□ -2.2
CCDC58Q4VC31 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.31□□□□□ -2.2
CCDC58Q4VC31 U8.13-201ENST00000390842 128 ntBASIC1.31□□□□□ -2.2
CCDC58Q4VC31 HMGB1P17-201ENST00000403495 628 ntBASIC1.31□□□□□ -2.2
CCDC58Q4VC31 RNU4-26P-201ENST00000410270 107 ntBASIC1.31□□□□□ -2.2
CCDC58Q4VC31 RNU6-516P-201ENST00000411381 104 ntBASIC1.31□□□□□ -2.2
CCDC58Q4VC31 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC1.31□□□□□ -2.2
CCDC58Q4VC31 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.31□□□□□ -2.2
CCDC58Q4VC31 PAICSP7-201ENST00000419829 962 ntBASIC1.31□□□□□ -2.2
CCDC58Q4VC31 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.31□□□□□ -2.2
CCDC58Q4VC31 AC092047.1-201ENST00000424997 240 ntBASIC1.31□□□□□ -2.2
CCDC58Q4VC31 AL035407.1-201ENST00000429211 571 ntBASIC1.31□□□□□ -2.2
CCDC58Q4VC31 SSXP1-201ENST00000453640 473 ntBASIC1.31□□□□□ -2.2
CCDC58Q4VC31 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.31□□□□□ -2.2
CCDC58Q4VC31 LARP1BP2-201ENST00000486594 519 ntBASIC1.31□□□□□ -2.2
CCDC58Q4VC31 AC113420.1-201ENST00000507903 571 ntBASIC1.31□□□□□ -2.2
CCDC58Q4VC31 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
CCDC58Q4VC31 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC1.31□□□□□ -2.2
CCDC58Q4VC31 DUXAP5-201ENST00000529668 529 ntBASIC1.31□□□□□ -2.2
CCDC58Q4VC31 AC024224.1-201ENST00000538284 609 ntBASIC1.31□□□□□ -2.2
CCDC58Q4VC31 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.31□□□□□ -2.2
CCDC58Q4VC31 AC233702.2-202ENST00000562547 291 ntBASIC1.31□□□□□ -2.2
CCDC58Q4VC31 SUB1P3-201ENST00000564581 315 ntBASIC1.31□□□□□ -2.2
CCDC58Q4VC31 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.31□□□□□ -2.2
CCDC58Q4VC31 AL138963.2-201ENST00000605137 226 ntBASIC1.31□□□□□ -2.2
CCDC58Q4VC31 AL138478.1-201ENST00000612252 832 ntBASIC1.31□□□□□ -2.2
CCDC58Q4VC31 STMN1P1-201ENST00000617809 440 ntBASIC1.31□□□□□ -2.2
CCDC58Q4VC31 DLEU1_1.1-201ENST00000618107 190 ntBASIC1.31□□□□□ -2.2
CCDC58Q4VC31 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
CCDC58Q4VC31 MTND5P30-201ENST00000452896 1731 ntBASIC1.31□□□□□ -2.2
CCDC58Q4VC31 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.3□□□□□ -2.2
CCDC58Q4VC31 AL356292.1-201ENST00000283110 373 ntBASIC1.3□□□□□ -2.2
CCDC58Q4VC31 MIR26B-201ENST00000362251 77 ntBASIC1.3□□□□□ -2.2
CCDC58Q4VC31 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.3□□□□□ -2.2
CCDC58Q4VC31 RNU2-43P-201ENST00000410306 190 ntBASIC1.3□□□□□ -2.2
CCDC58Q4VC31 UBE2FP1-201ENST00000416536 447 ntBASIC1.3□□□□□ -2.2
CCDC58Q4VC31 AC007742.1-201ENST00000425789 329 ntBASIC1.3□□□□□ -2.2
CCDC58Q4VC31 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC1.3□□□□□ -2.2
CCDC58Q4VC31 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.3□□□□□ -2.2
CCDC58Q4VC31 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.3□□□□□ -2.2
CCDC58Q4VC31 ELOCP26-201ENST00000436067 329 ntBASIC1.3□□□□□ -2.2
CCDC58Q4VC31 AC009238.1-201ENST00000442165 424 ntBASIC1.3□□□□□ -2.2
CCDC58Q4VC31 AC009237.6-201ENST00000446969 424 ntBASIC1.3□□□□□ -2.2
CCDC58Q4VC31 RPL31P58-201ENST00000469001 379 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms