Protein–RNA interactions for Protein: Q12948

FOXC1, Forkhead box protein C1, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1Q12948 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
FOXC1Q12948 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
FOXC1Q12948 RNU6-1167P-201ENST00000363227 94 ntBASIC5.18□□□□□ -1.58
FOXC1Q12948 RNU6-407P-201ENST00000365280 104 ntBASIC5.18□□□□□ -1.58
FOXC1Q12948 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
FOXC1Q12948 MIR105-1-201ENST00000385222 81 ntBASIC5.18□□□□□ -1.58
FOXC1Q12948 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.18□□□□□ -1.58
FOXC1Q12948 RN7SKP151-201ENST00000410230 316 ntBASIC5.18□□□□□ -1.58
FOXC1Q12948 BPY2DP-201ENST00000422208 265 ntBASIC5.18□□□□□ -1.58
FOXC1Q12948 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.18□□□□□ -1.58
FOXC1Q12948 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.18□□□□□ -1.58
FOXC1Q12948 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC5.18□□□□□ -1.58
FOXC1Q12948 AL354710.1-201ENST00000453641 246 ntBASIC5.18□□□□□ -1.58
FOXC1Q12948 SCARNA8-201ENST00000515924 131 ntBASIC5.18□□□□□ -1.58
FOXC1Q12948 AC021006.3-201ENST00000530771 192 ntBASIC5.18□□□□□ -1.58
FOXC1Q12948 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.18□□□□□ -1.58
FOXC1Q12948 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.18□□□□□ -1.58
FOXC1Q12948 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.18□□□□□ -1.58
FOXC1Q12948 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC5.18□□□□□ -1.58
FOXC1Q12948 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC5.18□□□□□ -1.58
FOXC1Q12948 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.18□□□□□ -1.58
FOXC1Q12948 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
FOXC1Q12948 SNX18P3-202ENST00000565670 1750 ntBASIC5.18□□□□□ -1.58
FOXC1Q12948 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
FOXC1Q12948 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
FOXC1Q12948 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC5.18□□□□□ -1.58
FOXC1Q12948 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC5.18□□□□□ -1.58
FOXC1Q12948 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.18□□□□□ -1.58
FOXC1Q12948 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.18□□□□□ -1.58
FOXC1Q12948 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
FOXC1Q12948 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC5.18□□□□□ -1.58
FOXC1Q12948 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.17□□□□□ -1.58
FOXC1Q12948 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
FOXC1Q12948 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
FOXC1Q12948 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
FOXC1Q12948 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
FOXC1Q12948 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
FOXC1Q12948 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
FOXC1Q12948 ZNF702P-202ENST00000434269 1966 ntBASIC5.17□□□□□ -1.58
FOXC1Q12948 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
FOXC1Q12948 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
FOXC1Q12948 MIR450A1-201ENST00000362262 91 ntBASIC5.17□□□□□ -1.58
FOXC1Q12948 RNU6-915P-201ENST00000364943 103 ntBASIC5.17□□□□□ -1.58
FOXC1Q12948 RNU5E-7P-201ENST00000365290 117 ntBASIC5.17□□□□□ -1.58
FOXC1Q12948 MIR600-201ENST00000385007 98 ntBASIC5.17□□□□□ -1.58
FOXC1Q12948 MIR888-201ENST00000401186 77 ntBASIC5.17□□□□□ -1.58
FOXC1Q12948 RPL18P10-201ENST00000425606 538 ntBASIC5.17□□□□□ -1.58
FOXC1Q12948 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC5.17□□□□□ -1.58
FOXC1Q12948 AC020593.1-201ENST00000507399 299 ntBASIC5.17□□□□□ -1.58
FOXC1Q12948 RNU6-58P-201ENST00000517143 103 ntBASIC5.17□□□□□ -1.58
FOXC1Q12948 AC008033.2-201ENST00000542626 177 ntBASIC5.17□□□□□ -1.58
FOXC1Q12948 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC5.17□□□□□ -1.58
FOXC1Q12948 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.17□□□□□ -1.58
FOXC1Q12948 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.17□□□□□ -1.58
FOXC1Q12948 AL731556.1-201ENST00000394628 3711 ntBASIC5.17□□□□□ -1.58
FOXC1Q12948 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
FOXC1Q12948 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
FOXC1Q12948 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
FOXC1Q12948 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
FOXC1Q12948 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
FOXC1Q12948 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.17□□□□□ -1.58
FOXC1Q12948 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.17□□□□□ -1.58
FOXC1Q12948 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
FOXC1Q12948 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
FOXC1Q12948 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
FOXC1Q12948 AC144833.1-201ENST00000567953 4089 ntBASIC5.16□□□□□ -1.58
FOXC1Q12948 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
FOXC1Q12948 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.16□□□□□ -1.58
FOXC1Q12948 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
FOXC1Q12948 Y_RNA.35-201ENST00000362601 101 ntBASIC5.16□□□□□ -1.58
FOXC1Q12948 Y_RNA.280-201ENST00000364765 112 ntBASIC5.16□□□□□ -1.58
FOXC1Q12948 RNA5SP91-201ENST00000390902 119 ntBASIC5.16□□□□□ -1.58
FOXC1Q12948 AL078599.1-201ENST00000402075 293 ntBASIC5.16□□□□□ -1.58
FOXC1Q12948 MIR1193-201ENST00000408109 78 ntBASIC5.16□□□□□ -1.58
FOXC1Q12948 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.16□□□□□ -1.58
FOXC1Q12948 Y_RNA.595-201ENST00000410403 105 ntBASIC5.16□□□□□ -1.58
FOXC1Q12948 EIF1AXP1-201ENST00000419267 435 ntBASIC5.16□□□□□ -1.58
FOXC1Q12948 MRPS21P3-201ENST00000436696 262 ntBASIC5.16□□□□□ -1.58
FOXC1Q12948 AC124916.1-201ENST00000444020 547 ntBASIC5.16□□□□□ -1.58
FOXC1Q12948 snoU109.6-201ENST00000516831 118 ntBASIC5.16□□□□□ -1.58
FOXC1Q12948 RN7SKP277-201ENST00000516895 283 ntBASIC5.16□□□□□ -1.58
FOXC1Q12948 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.16□□□□□ -1.58
FOXC1Q12948 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
FOXC1Q12948 AL670379.3-201ENST00000605040 251 ntBASIC5.16□□□□□ -1.58
FOXC1Q12948 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.16□□□□□ -1.58
FOXC1Q12948 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.16□□□□□ -1.58
FOXC1Q12948 TCL6_3.1-201ENST00000619064 137 ntBASIC5.16□□□□□ -1.58
FOXC1Q12948 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.16□□□□□ -1.58
FOXC1Q12948 MIR6844-201ENST00000637122 62 ntBASIC5.16□□□□□ -1.58
FOXC1Q12948 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.16□□□□□ -1.58
FOXC1Q12948 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
FOXC1Q12948 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
FOXC1Q12948 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
FOXC1Q12948 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
FOXC1Q12948 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
FOXC1Q12948 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.16□□□□□ -1.58
FOXC1Q12948 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.15□□□□□ -1.58
FOXC1Q12948 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
FOXC1Q12948 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
FOXC1Q12948 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms