Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.92□□□□□ -1.94
GABPAQ06546 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.92□□□□□ -1.94
GABPAQ06546 AL512286.1-201ENST00000439244 400 ntBASIC2.92□□□□□ -1.94
GABPAQ06546 GAPDHP27-201ENST00000447427 1020 ntBASIC2.92□□□□□ -1.94
GABPAQ06546 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.92□□□□□ -1.94
GABPAQ06546 RPL36AP33-201ENST00000450395 310 ntBASIC2.92□□□□□ -1.94
GABPAQ06546 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.92□□□□□ -1.94
GABPAQ06546 BZW1P2-201ENST00000473537 826 ntBASIC2.92□□□□□ -1.94
GABPAQ06546 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
GABPAQ06546 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.92□□□□□ -1.94
GABPAQ06546 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.92□□□□□ -1.94
GABPAQ06546 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.92□□□□□ -1.94
GABPAQ06546 SNORA31.1-201ENST00000515993 133 ntBASIC2.92□□□□□ -1.94
GABPAQ06546 SNORA31.5-201ENST00000516190 133 ntBASIC2.92□□□□□ -1.94
GABPAQ06546 SCARNA15.2-201ENST00000516409 127 ntBASIC2.92□□□□□ -1.94
GABPAQ06546 RNU6-232P-201ENST00000517144 64 ntBASIC2.92□□□□□ -1.94
GABPAQ06546 SNORA31.26-201ENST00000517250 137 ntBASIC2.92□□□□□ -1.94
GABPAQ06546 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.92□□□□□ -1.94
GABPAQ06546 CKS1BP7-201ENST00000522230 235 ntBASIC2.92□□□□□ -1.94
GABPAQ06546 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.92□□□□□ -1.94
GABPAQ06546 MTND4LP18-201ENST00000526864 291 ntBASIC2.92□□□□□ -1.94
GABPAQ06546 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.92□□□□□ -1.94
GABPAQ06546 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.92□□□□□ -1.94
GABPAQ06546 AL133153.1-201ENST00000557756 303 ntBASIC2.92□□□□□ -1.94
GABPAQ06546 PCMTD1P2-201ENST00000565017 355 ntBASIC2.92□□□□□ -1.94
GABPAQ06546 SNORD53-201ENST00000579969 78 ntBASIC2.92□□□□□ -1.94
GABPAQ06546 AC013553.2-201ENST00000604244 589 ntBASIC2.92□□□□□ -1.94
GABPAQ06546 HSPE1P7-201ENST00000604681 321 ntBASIC2.92□□□□□ -1.94
GABPAQ06546 AC004908.2-201ENST00000609090 574 ntBASIC2.92□□□□□ -1.94
GABPAQ06546 OR10AB1P-201ENST00000609613 938 ntBASIC2.92□□□□□ -1.94
GABPAQ06546 AL360219.1-201ENST00000610230 366 ntBASIC2.92□□□□□ -1.94
GABPAQ06546 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
GABPAQ06546 AC004223.4-201ENST00000612426 332 ntBASIC2.92□□□□□ -1.94
GABPAQ06546 AC010133.1-201ENST00000615809 842 ntBASIC2.92□□□□□ -1.94
GABPAQ06546 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.92□□□□□ -1.94
GABPAQ06546 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.92□□□□□ -1.94
GABPAQ06546 AC084035.1-201ENST00000634543 607 ntBASIC2.92□□□□□ -1.94
GABPAQ06546 AC006927.3-201ENST00000638789 384 ntBASIC2.92□□□□□ -1.94
GABPAQ06546 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.92□□□□□ -1.94
GABPAQ06546 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
GABPAQ06546 Y_RNA.97-201ENST00000363094 102 ntBASIC2.91□□□□□ -1.94
GABPAQ06546 RNU6-501P-201ENST00000364072 100 ntBASIC2.91□□□□□ -1.94
GABPAQ06546 MIR19A-201ENST00000384878 82 ntBASIC2.91□□□□□ -1.94
GABPAQ06546 MIR325-201ENST00000385260 98 ntBASIC2.91□□□□□ -1.94
GABPAQ06546 RNU6-278P-201ENST00000390945 109 ntBASIC2.91□□□□□ -1.94
GABPAQ06546 MIR887-201ENST00000401258 79 ntBASIC2.91□□□□□ -1.94
GABPAQ06546 AL109755.1-201ENST00000401791 649 ntBASIC2.91□□□□□ -1.94
GABPAQ06546 SNORA3.2-201ENST00000408221 125 ntBASIC2.91□□□□□ -1.94
GABPAQ06546 RNA5SP344-201ENST00000411081 104 ntBASIC2.91□□□□□ -1.94
GABPAQ06546 RNA5SP508-201ENST00000411327 119 ntBASIC2.91□□□□□ -1.94
GABPAQ06546 AC093151.1-201ENST00000427711 313 ntBASIC2.91□□□□□ -1.94
GABPAQ06546 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC2.91□□□□□ -1.94
GABPAQ06546 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.91□□□□□ -1.94
GABPAQ06546 LARP1BP3-201ENST00000437229 869 ntBASIC2.91□□□□□ -1.94
GABPAQ06546 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.91□□□□□ -1.94
GABPAQ06546 ZNF114P1-201ENST00000453500 292 ntBASIC2.91□□□□□ -1.94
GABPAQ06546 ART2BP-201ENST00000453501 499 ntBASIC2.91□□□□□ -1.94
GABPAQ06546 AF131216.2-201ENST00000512316 564 ntBASIC2.91□□□□□ -1.94
GABPAQ06546 TTC39CP1-201ENST00000512513 755 ntBASIC2.91□□□□□ -1.94
GABPAQ06546 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.91□□□□□ -1.94
GABPAQ06546 RNA5SP76-201ENST00000516277 87 ntBASIC2.91□□□□□ -1.94
GABPAQ06546 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.91□□□□□ -1.94
GABPAQ06546 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.91□□□□□ -1.94
GABPAQ06546 AC124947.2-202ENST00000552735 133 ntBASIC2.91□□□□□ -1.94
GABPAQ06546 MTND3P12-201ENST00000559068 328 ntBASIC2.91□□□□□ -1.94
GABPAQ06546 AC145350.1-201ENST00000567426 208 ntBASIC2.91□□□□□ -1.94
GABPAQ06546 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.91□□□□□ -1.94
GABPAQ06546 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.91□□□□□ -1.94
GABPAQ06546 AP000403.1-201ENST00000603349 851 ntBASIC2.91□□□□□ -1.94
GABPAQ06546 AC103810.6-201ENST00000606708 136 ntBASIC2.91□□□□□ -1.94
GABPAQ06546 AC122133.1-201ENST00000613964 233 ntBASIC2.91□□□□□ -1.94
GABPAQ06546 AC004696.1-201ENST00000614345 607 ntBASIC2.91□□□□□ -1.94
GABPAQ06546 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.91□□□□□ -1.94
GABPAQ06546 AC120349.3-201ENST00000624377 529 ntBASIC2.91□□□□□ -1.94
GABPAQ06546 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.91□□□□□ -1.94
GABPAQ06546 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.91□□□□□ -1.94
GABPAQ06546 MTND5P7-201ENST00000413558 1798 ntBASIC2.91□□□□□ -1.94
GABPAQ06546 SDAD1P2-201ENST00000441308 2028 ntBASIC2.91□□□□□ -1.94
GABPAQ06546 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.91□□□□□ -1.94
GABPAQ06546 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
GABPAQ06546 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.91□□□□□ -1.94
GABPAQ06546 API5P2-201ENST00000397055 1498 ntBASIC2.9□□□□□ -1.94
GABPAQ06546 AL445523.1-201ENST00000451184 1362 ntBASIC2.9□□□□□ -1.94
GABPAQ06546 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
GABPAQ06546 ELF2P3-201ENST00000445099 1506 ntBASIC2.9□□□□□ -1.95
GABPAQ06546 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.9□□□□□ -1.95
GABPAQ06546 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
GABPAQ06546 RNY4P24-201ENST00000362735 96 ntBASIC2.9□□□□□ -1.95
GABPAQ06546 RNU5F-7P-201ENST00000363696 115 ntBASIC2.9□□□□□ -1.95
GABPAQ06546 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.9□□□□□ -1.95
GABPAQ06546 RNU6-809P-201ENST00000384461 107 ntBASIC2.9□□□□□ -1.95
GABPAQ06546 MTCYBP36-201ENST00000404146 440 ntBASIC2.9□□□□□ -1.95
GABPAQ06546 RN7SKP140-201ENST00000411196 284 ntBASIC2.9□□□□□ -1.95
GABPAQ06546 AC078974.1-201ENST00000411597 223 ntBASIC2.9□□□□□ -1.95
GABPAQ06546 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.9□□□□□ -1.95
GABPAQ06546 AL365184.2-201ENST00000431139 435 ntBASIC2.9□□□□□ -1.95
GABPAQ06546 SETP8-201ENST00000435341 628 ntBASIC2.9□□□□□ -1.95
GABPAQ06546 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.9□□□□□ -1.95
GABPAQ06546 TAAR7P-201ENST00000436141 242 ntBASIC2.9□□□□□ -1.95
GABPAQ06546 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 158.9 ms