Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 MIR1285-1-201ENST00000408593 84 ntBASIC0.7□□□□□ -2.3
PRKDCP78527 AC000111.3-201ENST00000433478 193 ntBASIC0.7□□□□□ -2.3
PRKDCP78527 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC0.7□□□□□ -2.3
PRKDCP78527 FAM206BP-201ENST00000510179 541 ntBASIC0.7□□□□□ -2.3
PRKDCP78527 AC087465.1-201ENST00000560574 245 ntBASIC0.7□□□□□ -2.3
PRKDCP78527 AL355812.1-201ENST00000603215 216 ntBASIC0.7□□□□□ -2.3
PRKDCP78527 AL133507.1-201ENST00000605269 557 ntBASIC0.7□□□□□ -2.3
PRKDCP78527 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.7□□□□□ -2.3
PRKDCP78527 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC0.7□□□□□ -2.3
PRKDCP78527 RNU6-335P-201ENST00000364563 113 ntBASIC0.7□□□□□ -2.3
PRKDCP78527 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.7□□□□□ -2.3
PRKDCP78527 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.7□□□□□ -2.3
PRKDCP78527 AL136380.1-201ENST00000447970 162 ntBASIC0.7□□□□□ -2.3
PRKDCP78527 AP003497.1-201ENST00000528472 562 ntBASIC0.7□□□□□ -2.3
PRKDCP78527 AC024619.4-201ENST00000580924 316 ntBASIC0.7□□□□□ -2.3
PRKDCP78527 AC112503.2-201ENST00000609005 552 ntBASIC0.7□□□□□ -2.3
PRKDCP78527 AC073592.7-201ENST00000623659 507 ntBASIC0.7□□□□□ -2.3
PRKDCP78527 RNU6-1077P-201ENST00000410506 102 ntBASIC0.69□□□□□ -2.3
PRKDCP78527 AC096533.1-201ENST00000411645 353 ntBASIC0.69□□□□□ -2.3
PRKDCP78527 AC104108.1-201ENST00000509930 412 ntBASIC0.69□□□□□ -2.3
PRKDCP78527 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC0.69□□□□□ -2.3
PRKDCP78527 AL132857.1-201ENST00000555180 708 ntBASIC0.69□□□□□ -2.3
PRKDCP78527 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
PRKDCP78527 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC0.69□□□□□ -2.3
PRKDCP78527 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC0.69□□□□□ -2.3
PRKDCP78527 AC067863.3-201ENST00000624172 122 ntBASIC0.69□□□□□ -2.3
PRKDCP78527 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
PRKDCP78527 SNORD14B-201ENST00000364533 90 ntBASIC0.69□□□□□ -2.3
PRKDCP78527 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.69□□□□□ -2.3
PRKDCP78527 AC004854.1-201ENST00000440356 349 ntBASIC0.69□□□□□ -2.3
PRKDCP78527 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC0.69□□□□□ -2.3
PRKDCP78527 RPS23P3-201ENST00000470993 430 ntBASIC0.69□□□□□ -2.3
PRKDCP78527 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.69□□□□□ -2.3
PRKDCP78527 AC104806.1-201ENST00000508720 308 ntBASIC0.69□□□□□ -2.3
PRKDCP78527 RNA5SP364-201ENST00000516938 78 ntBASIC0.69□□□□□ -2.3
PRKDCP78527 AC109635.4-202ENST00000531666 412 ntBASIC0.69□□□□□ -2.3
PRKDCP78527 AC090897.2-201ENST00000581715 130 ntBASIC0.69□□□□□ -2.3
PRKDCP78527 MIR3117-201ENST00000584034 78 ntBASIC0.69□□□□□ -2.3
PRKDCP78527 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.69□□□□□ -2.3
PRKDCP78527 FAM71BP1-201ENST00000604431 523 ntBASIC0.69□□□□□ -2.3
PRKDCP78527 AL161734.1-201ENST00000609720 557 ntBASIC0.69□□□□□ -2.3
PRKDCP78527 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
PRKDCP78527 Y_RNA.518-201ENST00000384552 113 ntBASIC0.69□□□□□ -2.3
PRKDCP78527 AL139397.2-201ENST00000404529 772 ntBASIC0.69□□□□□ -2.3
PRKDCP78527 GDI2P2-201ENST00000445131 608 ntBASIC0.69□□□□□ -2.3
PRKDCP78527 PSPHP1-201ENST00000450062 261 ntBASIC0.69□□□□□ -2.3
PRKDCP78527 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC0.69□□□□□ -2.3
PRKDCP78527 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC0.69□□□□□ -2.3
PRKDCP78527 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC0.69□□□□□ -2.3
PRKDCP78527 RNU6-234P-201ENST00000365229 104 ntBASIC0.68□□□□□ -2.3
PRKDCP78527 RNU4-31P-201ENST00000384211 141 ntBASIC0.68□□□□□ -2.3
PRKDCP78527 RNU6-193P-201ENST00000410977 107 ntBASIC0.68□□□□□ -2.3
PRKDCP78527 RPL21P90-201ENST00000415692 466 ntBASIC0.68□□□□□ -2.3
PRKDCP78527 ZNF965P-201ENST00000432501 817 ntBASIC0.68□□□□□ -2.3
PRKDCP78527 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.68□□□□□ -2.3
PRKDCP78527 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC0.68□□□□□ -2.3
PRKDCP78527 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC0.68□□□□□ -2.3
PRKDCP78527 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC0.68□□□□□ -2.3
PRKDCP78527 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
PRKDCP78527 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
PRKDCP78527 COX6CP18-201ENST00000448769 222 ntBASIC0.68□□□□□ -2.3
PRKDCP78527 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC0.68□□□□□ -2.3
PRKDCP78527 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.68□□□□□ -2.3
PRKDCP78527 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC0.68□□□□□ -2.3
PRKDCP78527 BZW1P2-201ENST00000473537 826 ntBASIC0.68□□□□□ -2.3
PRKDCP78527 AL135752.1-201ENST00000479477 471 ntBASIC0.68□□□□□ -2.3
PRKDCP78527 LARP7P4-201ENST00000481075 878 ntBASIC0.68□□□□□ -2.3
PRKDCP78527 SNORD114-21-201ENST00000606412 72 ntBASIC0.68□□□□□ -2.3
PRKDCP78527 AC106028.5-201ENST00000610332 395 ntBASIC0.68□□□□□ -2.3
PRKDCP78527 AL590282.1-201ENST00000610379 1136 ntBASIC0.68□□□□□ -2.3
PRKDCP78527 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.68□□□□□ -2.3
PRKDCP78527 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
PRKDCP78527 RNU2-40P-201ENST00000410833 196 ntBASIC0.68□□□□□ -2.3
PRKDCP78527 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC0.68□□□□□ -2.3
PRKDCP78527 AL513343.1-201ENST00000451818 792 ntBASIC0.68□□□□□ -2.3
PRKDCP78527 RNU6-1073P-201ENST00000517182 106 ntBASIC0.68□□□□□ -2.3
PRKDCP78527 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
PRKDCP78527 COX6CP3-201ENST00000580869 223 ntBASIC0.68□□□□□ -2.3
PRKDCP78527 BX322635.1-201ENST00000605804 496 ntBASIC0.68□□□□□ -2.3
PRKDCP78527 AC110079.1-202ENST00000635213 138 ntBASIC0.68□□□□□ -2.3
PRKDCP78527 AC110792.3-201ENST00000595906 1614 ntBASIC0.68□□□□□ -2.3
PRKDCP78527 AC073055.1-201ENST00000456901 1621 ntBASIC0.67□□□□□ -2.3
PRKDCP78527 MTND2P9-201ENST00000422293 931 ntBASIC0.67□□□□□ -2.3
PRKDCP78527 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC0.67□□□□□ -2.3
PRKDCP78527 AC096751.1-202ENST00000502691 1067 ntBASIC0.67□□□□□ -2.3
PRKDCP78527 AP004247.1-201ENST00000531556 1289 ntBASIC0.67□□□□□ -2.3
PRKDCP78527 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC0.67□□□□□ -2.3
PRKDCP78527 AC092140.2-201ENST00000618027 521 ntBASIC0.67□□□□□ -2.3
PRKDCP78527 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC0.67□□□□□ -2.3
PRKDCP78527 SNORA62.1-201ENST00000364287 154 ntBASIC0.67□□□□□ -2.3
PRKDCP78527 RNU4-52P-201ENST00000384209 138 ntBASIC0.67□□□□□ -2.3
PRKDCP78527 AL355497.1-201ENST00000406262 551 ntBASIC0.67□□□□□ -2.3
PRKDCP78527 RNA5SP498-201ENST00000411342 120 ntBASIC0.67□□□□□ -2.3
PRKDCP78527 AC244098.2-201ENST00000422068 99 ntBASIC0.67□□□□□ -2.3
PRKDCP78527 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.67□□□□□ -2.3
PRKDCP78527 NAP1L1P3-201ENST00000462291 880 ntBASIC0.67□□□□□ -2.3
PRKDCP78527 HMGB3P17-201ENST00000504195 649 ntBASIC0.67□□□□□ -2.3
PRKDCP78527 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.67□□□□□ -2.3
PRKDCP78527 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC0.67□□□□□ -2.3
PRKDCP78527 RNU6-319P-201ENST00000516025 108 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms