Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.78□□□□□ -1.96
SRP54P61011 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.78□□□□□ -1.96
SRP54P61011 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.78□□□□□ -1.96
SRP54P61011 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.78□□□□□ -1.96
SRP54P61011 MIR4293-201ENST00000584305 78 ntBASIC2.78□□□□□ -1.96
SRP54P61011 AC022022.2-201ENST00000602989 360 ntBASIC2.78□□□□□ -1.96
SRP54P61011 OR2AS2P-201ENST00000606902 342 ntBASIC2.78□□□□□ -1.96
SRP54P61011 AL355472.4-201ENST00000610233 626 ntBASIC2.78□□□□□ -1.96
SRP54P61011 AC008498.1-201ENST00000613012 531 ntBASIC2.78□□□□□ -1.96
SRP54P61011 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.78□□□□□ -1.96
SRP54P61011 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.78□□□□□ -1.96
SRP54P61011 CR848007.1-201ENST00000442354 1699 ntBASIC2.78□□□□□ -1.96
SRP54P61011 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SRP54P61011 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.97
SRP54P61011 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.77□□□□□ -1.97
SRP54P61011 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.77□□□□□ -1.97
SRP54P61011 Y_RNA.245-201ENST00000364493 95 ntBASIC2.77□□□□□ -1.97
SRP54P61011 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.77□□□□□ -1.97
SRP54P61011 AC119751.3-201ENST00000399720 670 ntBASIC2.77□□□□□ -1.97
SRP54P61011 RNA5SP184-201ENST00000411071 108 ntBASIC2.77□□□□□ -1.97
SRP54P61011 HIGD1AP15-201ENST00000416198 280 ntBASIC2.77□□□□□ -1.97
SRP54P61011 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.77□□□□□ -1.97
SRP54P61011 XKRYP1-201ENST00000423438 492 ntBASIC2.77□□□□□ -1.97
SRP54P61011 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC2.77□□□□□ -1.97
SRP54P61011 AC098614.2-201ENST00000426040 255 ntBASIC2.77□□□□□ -1.97
SRP54P61011 XKRYP2-201ENST00000432915 492 ntBASIC2.77□□□□□ -1.97
SRP54P61011 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.77□□□□□ -1.97
SRP54P61011 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.77□□□□□ -1.97
SRP54P61011 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC2.77□□□□□ -1.97
SRP54P61011 MTATP6P30-201ENST00000443540 664 ntBASIC2.77□□□□□ -1.97
SRP54P61011 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.77□□□□□ -1.97
SRP54P61011 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.77□□□□□ -1.97
SRP54P61011 MRPS17P3-201ENST00000465453 385 ntBASIC2.77□□□□□ -1.97
SRP54P61011 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SRP54P61011 SUMO2P6-201ENST00000505273 288 ntBASIC2.77□□□□□ -1.97
SRP54P61011 AC113155.1-201ENST00000511141 769 ntBASIC2.77□□□□□ -1.97
SRP54P61011 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.77□□□□□ -1.97
SRP54P61011 RNU6-678P-201ENST00000516832 109 ntBASIC2.77□□□□□ -1.97
SRP54P61011 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.77□□□□□ -1.97
SRP54P61011 AC079600.2-201ENST00000550076 130 ntBASIC2.77□□□□□ -1.97
SRP54P61011 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.77□□□□□ -1.97
SRP54P61011 AL359212.1-201ENST00000556608 614 ntBASIC2.77□□□□□ -1.97
SRP54P61011 AC010546.1-201ENST00000569391 485 ntBASIC2.77□□□□□ -1.97
SRP54P61011 MIR4672-201ENST00000583126 81 ntBASIC2.77□□□□□ -1.97
SRP54P61011 HMGN2P15-201ENST00000585707 270 ntBASIC2.77□□□□□ -1.97
SRP54P61011 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.77□□□□□ -1.97
SRP54P61011 AC007619.2-201ENST00000605743 379 ntBASIC2.77□□□□□ -1.97
SRP54P61011 OR10AB1P-201ENST00000609613 938 ntBASIC2.77□□□□□ -1.97
SRP54P61011 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.77□□□□□ -1.97
SRP54P61011 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.77□□□□□ -1.97
SRP54P61011 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.77□□□□□ -1.97
SRP54P61011 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SRP54P61011 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
SRP54P61011 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SRP54P61011 AL359693.1-201ENST00000614959 2407 ntBASIC2.76□□□□□ -1.97
SRP54P61011 AC062016.1-201ENST00000355719 319 ntBASIC2.76□□□□□ -1.97
SRP54P61011 RNU1-35P-201ENST00000362782 153 ntBASIC2.76□□□□□ -1.97
SRP54P61011 RNU6-884P-201ENST00000363889 107 ntBASIC2.76□□□□□ -1.97
SRP54P61011 MIR512-1-201ENST00000384913 84 ntBASIC2.76□□□□□ -1.97
SRP54P61011 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.76□□□□□ -1.97
SRP54P61011 AC078974.1-201ENST00000411597 223 ntBASIC2.76□□□□□ -1.97
SRP54P61011 AL513477.1-202ENST00000417061 214 ntBASIC2.76□□□□□ -1.97
SRP54P61011 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.76□□□□□ -1.97
SRP54P61011 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.76□□□□□ -1.97
SRP54P61011 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.76□□□□□ -1.97
SRP54P61011 ELOCP14-201ENST00000428070 331 ntBASIC2.76□□□□□ -1.97
SRP54P61011 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.76□□□□□ -1.97
SRP54P61011 SNRPEP9-201ENST00000436794 238 ntBASIC2.76□□□□□ -1.97
SRP54P61011 ELOCP7-201ENST00000439968 331 ntBASIC2.76□□□□□ -1.97
SRP54P61011 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.76□□□□□ -1.97
SRP54P61011 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.76□□□□□ -1.97
SRP54P61011 RPS15AP27-201ENST00000449183 343 ntBASIC2.76□□□□□ -1.97
SRP54P61011 AC009961.3-201ENST00000449832 765 ntBASIC2.76□□□□□ -1.97
SRP54P61011 RPL26P9-201ENST00000457466 433 ntBASIC2.76□□□□□ -1.97
SRP54P61011 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.76□□□□□ -1.97
SRP54P61011 AC072039.1-201ENST00000477611 581 ntBASIC2.76□□□□□ -1.97
SRP54P61011 RPL31P41-201ENST00000477967 372 ntBASIC2.76□□□□□ -1.97
SRP54P61011 RPL36AP51-201ENST00000487216 318 ntBASIC2.76□□□□□ -1.97
SRP54P61011 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
SRP54P61011 AC117522.3-201ENST00000507974 584 ntBASIC2.76□□□□□ -1.97
SRP54P61011 RPL23AP94-201ENST00000512518 302 ntBASIC2.76□□□□□ -1.97
SRP54P61011 RNU6-1003P-201ENST00000517099 105 ntBASIC2.76□□□□□ -1.97
SRP54P61011 MTND1P24-201ENST00000552175 861 ntBASIC2.76□□□□□ -1.97
SRP54P61011 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.76□□□□□ -1.97
SRP54P61011 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.76□□□□□ -1.97
SRP54P61011 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.76□□□□□ -1.97
SRP54P61011 AC025281.1-201ENST00000567026 265 ntBASIC2.76□□□□□ -1.97
SRP54P61011 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.76□□□□□ -1.97
SRP54P61011 AP000787.2-201ENST00000604432 568 ntBASIC2.76□□□□□ -1.97
SRP54P61011 AC107214.2-201ENST00000608204 634 ntBASIC2.76□□□□□ -1.97
SRP54P61011 AC245517.5-201ENST00000611529 162 ntBASIC2.76□□□□□ -1.97
SRP54P61011 AC021755.4-201ENST00000616620 456 ntBASIC2.76□□□□□ -1.97
SRP54P61011 AC023510.2-201ENST00000622162 746 ntBASIC2.76□□□□□ -1.97
SRP54P61011 MTND5P29-201ENST00000458676 1807 ntBASIC2.76□□□□□ -1.97
SRP54P61011 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.76□□□□□ -1.97
SRP54P61011 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SRP54P61011 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SRP54P61011 Y_RNA.46-201ENST00000362695 102 ntBASIC2.75□□□□□ -1.97
SRP54P61011 RNU6-1167P-201ENST00000363227 94 ntBASIC2.75□□□□□ -1.97
SRP54P61011 U8.14-201ENST00000390843 143 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms