Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 MTCO1P42-201ENST00000457379 726 ntBASIC1.83□□□□□ -2.12
ACTBP60709 MTCO2P9-201ENST00000503214 694 ntBASIC1.83□□□□□ -2.12
ACTBP60709 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC1.83□□□□□ -2.12
ACTBP60709 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.83□□□□□ -2.12
ACTBP60709 AC008526.1-201ENST00000509149 338 ntBASIC1.83□□□□□ -2.12
ACTBP60709 AC091965.2-201ENST00000512324 613 ntBASIC1.83□□□□□ -2.12
ACTBP60709 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
ACTBP60709 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC1.83□□□□□ -2.12
ACTBP60709 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.83□□□□□ -2.12
ACTBP60709 AC007151.1-201ENST00000572774 483 ntBASIC1.83□□□□□ -2.12
ACTBP60709 MIR3935-201ENST00000583472 104 ntBASIC1.83□□□□□ -2.12
ACTBP60709 MIR5002-201ENST00000584713 97 ntBASIC1.83□□□□□ -2.12
ACTBP60709 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
ACTBP60709 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC1.83□□□□□ -2.12
ACTBP60709 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.83□□□□□ -2.12
ACTBP60709 AL390208.1-201ENST00000605885 644 ntBASIC1.83□□□□□ -2.12
ACTBP60709 AC004908.2-201ENST00000609090 574 ntBASIC1.83□□□□□ -2.12
ACTBP60709 AC013476.2-201ENST00000614456 459 ntBASIC1.83□□□□□ -2.12
ACTBP60709 AL603758.1-201ENST00000618654 241 ntBASIC1.83□□□□□ -2.12
ACTBP60709 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
ACTBP60709 AL159972.1-201ENST00000625150 448 ntBASIC1.83□□□□□ -2.12
ACTBP60709 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.83□□□□□ -2.12
ACTBP60709 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.83□□□□□ -2.12
ACTBP60709 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
ACTBP60709 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
ACTBP60709 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
ACTBP60709 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
ACTBP60709 RNA5SP289-201ENST00000362332 137 ntBASIC1.82□□□□□ -2.12
ACTBP60709 RNU1-91P-201ENST00000364746 163 ntBASIC1.82□□□□□ -2.12
ACTBP60709 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
ACTBP60709 RNU2-33P-201ENST00000410344 192 ntBASIC1.82□□□□□ -2.12
ACTBP60709 MTCO2P5-201ENST00000422621 426 ntBASIC1.82□□□□□ -2.12
ACTBP60709 RPS3AP44-201ENST00000425466 790 ntBASIC1.82□□□□□ -2.12
ACTBP60709 MED14P1-201ENST00000430517 648 ntBASIC1.82□□□□□ -2.12
ACTBP60709 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.82□□□□□ -2.12
ACTBP60709 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.82□□□□□ -2.12
ACTBP60709 SEPT7P5-201ENST00000434048 306 ntBASIC1.82□□□□□ -2.12
ACTBP60709 MTND2P20-201ENST00000440805 661 ntBASIC1.82□□□□□ -2.12
ACTBP60709 HIGD1AP2-201ENST00000446367 280 ntBASIC1.82□□□□□ -2.12
ACTBP60709 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.82□□□□□ -2.12
ACTBP60709 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.82□□□□□ -2.12
ACTBP60709 RPL21P134-201ENST00000453468 483 ntBASIC1.82□□□□□ -2.12
ACTBP60709 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.82□□□□□ -2.12
ACTBP60709 OFD1P7Y-201ENST00000454643 1155 ntBASIC1.82□□□□□ -2.12
ACTBP60709 MTCO3P11-201ENST00000455103 774 ntBASIC1.82□□□□□ -2.12
ACTBP60709 SNORD121B-201ENST00000458838 81 ntBASIC1.82□□□□□ -2.12
ACTBP60709 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.82□□□□□ -2.12
ACTBP60709 RPS20P22-201ENST00000473700 357 ntBASIC1.82□□□□□ -2.12
ACTBP60709 AC107032.1-201ENST00000485945 480 ntBASIC1.82□□□□□ -2.12
ACTBP60709 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.82□□□□□ -2.12
ACTBP60709 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.82□□□□□ -2.12
ACTBP60709 RNA5SP281-201ENST00000516504 135 ntBASIC1.82□□□□□ -2.12
ACTBP60709 RNU6-334P-201ENST00000517072 102 ntBASIC1.82□□□□□ -2.12
ACTBP60709 AC022861.1-201ENST00000522981 663 ntBASIC1.82□□□□□ -2.12
ACTBP60709 AP003122.3-201ENST00000526316 255 ntBASIC1.82□□□□□ -2.12
ACTBP60709 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.82□□□□□ -2.12
ACTBP60709 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC1.82□□□□□ -2.12
ACTBP60709 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC1.82□□□□□ -2.12
ACTBP60709 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
ACTBP60709 AC090615.1-201ENST00000577519 154 ntBASIC1.82□□□□□ -2.12
ACTBP60709 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.82□□□□□ -2.12
ACTBP60709 MIR4298-201ENST00000584380 73 ntBASIC1.82□□□□□ -2.12
ACTBP60709 AC069304.2-201ENST00000605154 435 ntBASIC1.82□□□□□ -2.12
ACTBP60709 AC068276.1-201ENST00000605793 379 ntBASIC1.82□□□□□ -2.12
ACTBP60709 AC007038.2-201ENST00000608095 740 ntBASIC1.82□□□□□ -2.12
ACTBP60709 AL590099.1-201ENST00000615276 138 ntBASIC1.82□□□□□ -2.12
ACTBP60709 AC008443.7-201ENST00000622195 246 ntBASIC1.82□□□□□ -2.12
ACTBP60709 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
ACTBP60709 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.81□□□□□ -2.12
ACTBP60709 HSPA8P4-201ENST00000511877 1920 ntBASIC1.81□□□□□ -2.12
ACTBP60709 RNU6-236P-201ENST00000363886 106 ntBASIC1.81□□□□□ -2.12
ACTBP60709 RNA5SP160-201ENST00000364866 120 ntBASIC1.81□□□□□ -2.12
ACTBP60709 MIR218-1-201ENST00000384999 110 ntBASIC1.81□□□□□ -2.12
ACTBP60709 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
ACTBP60709 RSL24D1P4-201ENST00000400938 484 ntBASIC1.81□□□□□ -2.12
ACTBP60709 AL079342.2-201ENST00000403367 482 ntBASIC1.81□□□□□ -2.12
ACTBP60709 U6atac.2-201ENST00000408644 118 ntBASIC1.81□□□□□ -2.12
ACTBP60709 MTCO2P1-201ENST00000424648 477 ntBASIC1.81□□□□□ -2.12
ACTBP60709 RPL35AP22-201ENST00000436855 335 ntBASIC1.81□□□□□ -2.12
ACTBP60709 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.81□□□□□ -2.12
ACTBP60709 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.81□□□□□ -2.12
ACTBP60709 AC114981.1-201ENST00000503897 678 ntBASIC1.81□□□□□ -2.12
ACTBP60709 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.81□□□□□ -2.12
ACTBP60709 NRON-201ENST00000517270 370 ntBASIC1.81□□□□□ -2.12
ACTBP60709 MTCO3P15-201ENST00000526563 574 ntBASIC1.81□□□□□ -2.12
ACTBP60709 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
ACTBP60709 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
ACTBP60709 ANP32BP3-201ENST00000559213 706 ntBASIC1.81□□□□□ -2.12
ACTBP60709 AC005951.2-201ENST00000576282 495 ntBASIC1.81□□□□□ -2.12
ACTBP60709 VN1R87P-201ENST00000596706 487 ntBASIC1.81□□□□□ -2.12
ACTBP60709 AP000403.1-201ENST00000603349 851 ntBASIC1.81□□□□□ -2.12
ACTBP60709 AL583856.2-201ENST00000606298 543 ntBASIC1.81□□□□□ -2.12
ACTBP60709 AL158211.4-201ENST00000606988 584 ntBASIC1.81□□□□□ -2.12
ACTBP60709 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.81□□□□□ -2.12
ACTBP60709 FTX_3.1-201ENST00000610451 147 ntBASIC1.81□□□□□ -2.12
ACTBP60709 AC013412.1-201ENST00000610687 192 ntBASIC1.81□□□□□ -2.12
ACTBP60709 AC005332.6-201ENST00000613178 446 ntBASIC1.81□□□□□ -2.12
ACTBP60709 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.81□□□□□ -2.12
ACTBP60709 AC244517.12-201ENST00000623581 663 ntBASIC1.81□□□□□ -2.12
ACTBP60709 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms