Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.92□□□□□ -1.78
RHBDL3P58872 RNA5SP471-201ENST00000516971 106 ntBASIC3.92□□□□□ -1.78
RHBDL3P58872 NARSP2-201ENST00000518524 679 ntBASIC3.92□□□□□ -1.78
RHBDL3P58872 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.92□□□□□ -1.78
RHBDL3P58872 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.92□□□□□ -1.78
RHBDL3P58872 AL391261.3-201ENST00000557194 520 ntBASIC3.92□□□□□ -1.78
RHBDL3P58872 PIGPP4-201ENST00000584447 307 ntBASIC3.92□□□□□ -1.78
RHBDL3P58872 AC015871.2-201ENST00000603605 948 ntBASIC3.92□□□□□ -1.78
RHBDL3P58872 AC245014.2-201ENST00000603689 287 ntBASIC3.92□□□□□ -1.78
RHBDL3P58872 AC246785.4-201ENST00000605374 287 ntBASIC3.92□□□□□ -1.78
RHBDL3P58872 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.92□□□□□ -1.78
RHBDL3P58872 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.92□□□□□ -1.78
RHBDL3P58872 AC072046.2-201ENST00000618366 268 ntBASIC3.92□□□□□ -1.78
RHBDL3P58872 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.92□□□□□ -1.78
RHBDL3P58872 MTND5P42-201ENST00000637720 498 ntBASIC3.92□□□□□ -1.78
RHBDL3P58872 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.92□□□□□ -1.78
RHBDL3P58872 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
RHBDL3P58872 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RHBDL3P58872 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RHBDL3P58872 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.92□□□□□ -1.78
RHBDL3P58872 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
RHBDL3P58872 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.92□□□□□ -1.78
RHBDL3P58872 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RHBDL3P58872 AC058791.1-201ENST00000608412 3198 ntBASIC3.92□□□□□ -1.78
RHBDL3P58872 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
RHBDL3P58872 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
RHBDL3P58872 AP003122.5-201ENST00000527668 3766 ntBASIC3.91□□□□□ -1.78
RHBDL3P58872 Y_RNA.111-201ENST00000363248 100 ntBASIC3.91□□□□□ -1.78
RHBDL3P58872 RNU6-512P-201ENST00000364438 103 ntBASIC3.91□□□□□ -1.78
RHBDL3P58872 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RHBDL3P58872 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RHBDL3P58872 SMIM11P1-201ENST00000369586 178 ntBASIC3.91□□□□□ -1.78
RHBDL3P58872 RNU6-946P-201ENST00000383878 107 ntBASIC3.91□□□□□ -1.78
RHBDL3P58872 MIR558-201ENST00000384920 94 ntBASIC3.91□□□□□ -1.78
RHBDL3P58872 MIR301A-201ENST00000385261 86 ntBASIC3.91□□□□□ -1.78
RHBDL3P58872 RNA5SP229-201ENST00000410809 99 ntBASIC3.91□□□□□ -1.78
RHBDL3P58872 RPS12P24-201ENST00000412619 387 ntBASIC3.91□□□□□ -1.78
RHBDL3P58872 NDUFS5P4-201ENST00000412983 318 ntBASIC3.91□□□□□ -1.78
RHBDL3P58872 RPL26P27-201ENST00000414397 437 ntBASIC3.91□□□□□ -1.78
RHBDL3P58872 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.91□□□□□ -1.78
RHBDL3P58872 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.91□□□□□ -1.78
RHBDL3P58872 RPL36AP53-201ENST00000432891 316 ntBASIC3.91□□□□□ -1.78
RHBDL3P58872 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.91□□□□□ -1.78
RHBDL3P58872 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.91□□□□□ -1.78
RHBDL3P58872 KATNBL1P3-201ENST00000443475 909 ntBASIC3.91□□□□□ -1.78
RHBDL3P58872 GAPDHP17-201ENST00000449858 1001 ntBASIC3.91□□□□□ -1.78
RHBDL3P58872 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.91□□□□□ -1.78
RHBDL3P58872 CECR9-201ENST00000453421 199 ntBASIC3.91□□□□□ -1.78
RHBDL3P58872 S100A11P2-201ENST00000467589 312 ntBASIC3.91□□□□□ -1.78
RHBDL3P58872 AC007182.2-201ENST00000489251 402 ntBASIC3.91□□□□□ -1.78
RHBDL3P58872 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.91□□□□□ -1.78
RHBDL3P58872 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.91□□□□□ -1.78
RHBDL3P58872 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.91□□□□□ -1.78
RHBDL3P58872 RNA5SP165-201ENST00000517142 115 ntBASIC3.91□□□□□ -1.78
RHBDL3P58872 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.91□□□□□ -1.78
RHBDL3P58872 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RHBDL3P58872 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.91□□□□□ -1.78
RHBDL3P58872 MIR2682-201ENST00000580305 110 ntBASIC3.91□□□□□ -1.78
RHBDL3P58872 NBR2-204ENST00000587322 63 ntBASIC3.91□□□□□ -1.78
RHBDL3P58872 AC135507.1-201ENST00000607214 561 ntBASIC3.91□□□□□ -1.78
RHBDL3P58872 DUSP12P1-201ENST00000612874 516 ntBASIC3.91□□□□□ -1.78
RHBDL3P58872 RNVU1-4-201ENST00000612985 164 ntBASIC3.91□□□□□ -1.78
RHBDL3P58872 AC008498.1-201ENST00000613012 531 ntBASIC3.91□□□□□ -1.78
RHBDL3P58872 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.91□□□□□ -1.78
RHBDL3P58872 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RHBDL3P58872 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
RHBDL3P58872 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
RHBDL3P58872 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
RHBDL3P58872 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.9□□□□□ -1.79
RHBDL3P58872 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RHBDL3P58872 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RHBDL3P58872 RNU6-884P-201ENST00000363889 107 ntBASIC3.9□□□□□ -1.79
RHBDL3P58872 RNU6-14P-201ENST00000384630 106 ntBASIC3.9□□□□□ -1.79
RHBDL3P58872 MIR634-201ENST00000385208 97 ntBASIC3.9□□□□□ -1.79
RHBDL3P58872 MIR767-201ENST00000390228 109 ntBASIC3.9□□□□□ -1.79
RHBDL3P58872 AC126124.2-201ENST00000413542 321 ntBASIC3.9□□□□□ -1.79
RHBDL3P58872 AC080125.1-201ENST00000414888 684 ntBASIC3.9□□□□□ -1.79
RHBDL3P58872 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.9□□□□□ -1.79
RHBDL3P58872 AC007283.2-201ENST00000424739 197 ntBASIC3.9□□□□□ -1.79
RHBDL3P58872 SETP8-201ENST00000435341 628 ntBASIC3.9□□□□□ -1.79
RHBDL3P58872 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.9□□□□□ -1.79
RHBDL3P58872 MTND2P22-201ENST00000444325 1033 ntBASIC3.9□□□□□ -1.79
RHBDL3P58872 RPS29P12-201ENST00000460178 152 ntBASIC3.9□□□□□ -1.79
RHBDL3P58872 RAP1BP2-201ENST00000478270 544 ntBASIC3.9□□□□□ -1.79
RHBDL3P58872 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.9□□□□□ -1.79
RHBDL3P58872 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.9□□□□□ -1.79
RHBDL3P58872 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.9□□□□□ -1.79
RHBDL3P58872 ARL2BPP4-201ENST00000506854 471 ntBASIC3.9□□□□□ -1.79
RHBDL3P58872 AC117522.1-201ENST00000509821 380 ntBASIC3.9□□□□□ -1.79
RHBDL3P58872 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.9□□□□□ -1.79
RHBDL3P58872 AC117532.1-201ENST00000514638 323 ntBASIC3.9□□□□□ -1.79
RHBDL3P58872 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.9□□□□□ -1.79
RHBDL3P58872 AC022616.3-201ENST00000523940 148 ntBASIC3.9□□□□□ -1.79
RHBDL3P58872 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.9□□□□□ -1.79
RHBDL3P58872 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.9□□□□□ -1.79
RHBDL3P58872 AC040904.1-201ENST00000590850 223 ntBASIC3.9□□□□□ -1.79
RHBDL3P58872 RPL23AP78-201ENST00000599928 470 ntBASIC3.9□□□□□ -1.79
RHBDL3P58872 AC068790.2-201ENST00000602601 557 ntBASIC3.9□□□□□ -1.79
RHBDL3P58872 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.9□□□□□ -1.79
RHBDL3P58872 AL353743.1-202ENST00000431724 1695 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms