Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.35□□□□□ -2.03
CDH6P55285 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CDH6P55285 AC010329.5-201ENST00000623497 2174 ntBASIC2.35□□□□□ -2.03
CDH6P55285 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CDH6P55285 MIR23A-201ENST00000385245 73 ntBASIC2.35□□□□□ -2.03
CDH6P55285 AL591416.1-201ENST00000404015 867 ntBASIC2.35□□□□□ -2.03
CDH6P55285 AL355143.1-201ENST00000407101 841 ntBASIC2.35□□□□□ -2.03
CDH6P55285 RNU2-49P-201ENST00000410666 184 ntBASIC2.35□□□□□ -2.03
CDH6P55285 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.35□□□□□ -2.03
CDH6P55285 AC107081.1-201ENST00000414975 361 ntBASIC2.35□□□□□ -2.03
CDH6P55285 AC096649.2-201ENST00000416186 393 ntBASIC2.35□□□□□ -2.03
CDH6P55285 UBE2FP1-201ENST00000416536 447 ntBASIC2.35□□□□□ -2.03
CDH6P55285 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CDH6P55285 NANOGP2-201ENST00000435391 727 ntBASIC2.35□□□□□ -2.03
CDH6P55285 OSTCP8-201ENST00000445117 448 ntBASIC2.35□□□□□ -2.03
CDH6P55285 AL358794.1-201ENST00000445689 381 ntBASIC2.35□□□□□ -2.03
CDH6P55285 PAXBP1P1-201ENST00000449315 447 ntBASIC2.35□□□□□ -2.03
CDH6P55285 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.35□□□□□ -2.03
CDH6P55285 RPS29P20-201ENST00000489592 171 ntBASIC2.35□□□□□ -2.03
CDH6P55285 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.35□□□□□ -2.03
CDH6P55285 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.35□□□□□ -2.03
CDH6P55285 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.35□□□□□ -2.03
CDH6P55285 AC079395.1-201ENST00000510981 262 ntBASIC2.35□□□□□ -2.03
CDH6P55285 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.35□□□□□ -2.03
CDH6P55285 AC110760.3-202ENST00000515177 371 ntBASIC2.35□□□□□ -2.03
CDH6P55285 IGLV3-17-201ENST00000519099 244 ntBASIC2.35□□□□□ -2.03
CDH6P55285 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.35□□□□□ -2.03
CDH6P55285 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.35□□□□□ -2.03
CDH6P55285 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.35□□□□□ -2.03
CDH6P55285 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.35□□□□□ -2.03
CDH6P55285 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC2.35□□□□□ -2.03
CDH6P55285 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.35□□□□□ -2.03
CDH6P55285 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.35□□□□□ -2.03
CDH6P55285 AC013562.2-201ENST00000611632 603 ntBASIC2.35□□□□□ -2.03
CDH6P55285 AC109809.1-201ENST00000619665 545 ntBASIC2.35□□□□□ -2.03
CDH6P55285 AC068057.2-201ENST00000624047 895 ntBASIC2.35□□□□□ -2.03
CDH6P55285 AC099654.8-201ENST00000637757 681 ntBASIC2.35□□□□□ -2.03
CDH6P55285 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
CDH6P55285 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
CDH6P55285 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.35□□□□□ -2.03
CDH6P55285 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
CDH6P55285 RNU1-52P-201ENST00000384190 164 ntBASIC2.34□□□□□ -2.03
CDH6P55285 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.34□□□□□ -2.03
CDH6P55285 MTCYBP38-201ENST00000417160 1123 ntBASIC2.34□□□□□ -2.03
CDH6P55285 SEPT2P1-201ENST00000419651 180 ntBASIC2.34□□□□□ -2.03
CDH6P55285 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.34□□□□□ -2.03
CDH6P55285 MTCO1P53-201ENST00000441633 699 ntBASIC2.34□□□□□ -2.03
CDH6P55285 MTCO3P45-201ENST00000443036 613 ntBASIC2.34□□□□□ -2.03
CDH6P55285 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.34□□□□□ -2.03
CDH6P55285 COX6CP12-201ENST00000446748 202 ntBASIC2.34□□□□□ -2.03
CDH6P55285 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.34□□□□□ -2.03
CDH6P55285 USP9YP10-201ENST00000454868 628 ntBASIC2.34□□□□□ -2.03
CDH6P55285 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.34□□□□□ -2.03
CDH6P55285 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.34□□□□□ -2.03
CDH6P55285 AC109445.1-201ENST00000512356 383 ntBASIC2.34□□□□□ -2.03
CDH6P55285 RNA5SP281-201ENST00000516504 135 ntBASIC2.34□□□□□ -2.03
CDH6P55285 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.34□□□□□ -2.03
CDH6P55285 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.34□□□□□ -2.03
CDH6P55285 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.34□□□□□ -2.03
CDH6P55285 YWHAZP1-201ENST00000556286 722 ntBASIC2.34□□□□□ -2.03
CDH6P55285 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.34□□□□□ -2.03
CDH6P55285 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.34□□□□□ -2.03
CDH6P55285 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.34□□□□□ -2.03
CDH6P55285 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC2.34□□□□□ -2.03
CDH6P55285 AC018645.2-201ENST00000609151 472 ntBASIC2.34□□□□□ -2.03
CDH6P55285 AC131235.4-201ENST00000609288 620 ntBASIC2.34□□□□□ -2.03
CDH6P55285 AC245297.2-201ENST00000610119 565 ntBASIC2.34□□□□□ -2.03
CDH6P55285 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.34□□□□□ -2.03
CDH6P55285 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.34□□□□□ -2.03
CDH6P55285 CU459211.1-201ENST00000635667 749 ntBASIC2.34□□□□□ -2.03
CDH6P55285 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.34□□□□□ -2.03
CDH6P55285 MIRLET7G-201ENST00000362280 84 ntBASIC2.33□□□□□ -2.04
CDH6P55285 RNU4-82P-201ENST00000362443 140 ntBASIC2.33□□□□□ -2.04
CDH6P55285 RNU6-289P-201ENST00000364093 107 ntBASIC2.33□□□□□ -2.04
CDH6P55285 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.33□□□□□ -2.04
CDH6P55285 MTCO3P30-201ENST00000426425 670 ntBASIC2.33□□□□□ -2.04
CDH6P55285 AC236972.1-201ENST00000433225 199 ntBASIC2.33□□□□□ -2.04
CDH6P55285 HIGD1AP2-201ENST00000446367 280 ntBASIC2.33□□□□□ -2.04
CDH6P55285 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.33□□□□□ -2.04
CDH6P55285 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.33□□□□□ -2.04
CDH6P55285 AC013267.1-201ENST00000458227 267 ntBASIC2.33□□□□□ -2.04
CDH6P55285 UBE2DNL-203ENST00000474922 222 ntBASIC2.33□□□□□ -2.04
CDH6P55285 RPS15AP36-201ENST00000492022 382 ntBASIC2.33□□□□□ -2.04
CDH6P55285 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CDH6P55285 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.33□□□□□ -2.04
CDH6P55285 AC098591.2-201ENST00000510152 315 ntBASIC2.33□□□□□ -2.04
CDH6P55285 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
CDH6P55285 AC112206.4-201ENST00000515142 405 ntBASIC2.33□□□□□ -2.04
CDH6P55285 RNA5SP290-201ENST00000517133 127 ntBASIC2.33□□□□□ -2.04
CDH6P55285 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.33□□□□□ -2.04
CDH6P55285 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC2.33□□□□□ -2.04
CDH6P55285 AC121758.2-201ENST00000553271 193 ntBASIC2.33□□□□□ -2.04
CDH6P55285 AC023824.2-201ENST00000566185 400 ntBASIC2.33□□□□□ -2.04
CDH6P55285 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.33□□□□□ -2.04
CDH6P55285 AC006270.3-201ENST00000605967 1036 ntBASIC2.33□□□□□ -2.04
CDH6P55285 OR10AB1P-201ENST00000609613 938 ntBASIC2.33□□□□□ -2.04
CDH6P55285 AL449363.1-201ENST00000617815 186 ntBASIC2.33□□□□□ -2.04
CDH6P55285 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.33□□□□□ -2.04
CDH6P55285 AP002371.2-201ENST00000624450 503 ntBASIC2.33□□□□□ -2.04
CDH6P55285 IGHVIII-44-202ENST00000636235 289 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms