Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.84□□□□□ -1.95
HMGCS2P54868 AC002550.2-201ENST00000621246 394 ntBASIC2.84□□□□□ -1.95
HMGCS2P54868 AL158801.5-201ENST00000623123 465 ntBASIC2.84□□□□□ -1.95
HMGCS2P54868 AC091931.1-201ENST00000623488 728 ntBASIC2.84□□□□□ -1.95
HMGCS2P54868 AP003122.6-201ENST00000623831 495 ntBASIC2.84□□□□□ -1.95
HMGCS2P54868 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.84□□□□□ -1.95
HMGCS2P54868 AL691447.3-201ENST00000635020 330 ntBASIC2.84□□□□□ -1.95
HMGCS2P54868 CCT4P2-201ENST00000233836 1548 ntBASIC2.83□□□□□ -1.96
HMGCS2P54868 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.83□□□□□ -1.96
HMGCS2P54868 RPS4XP3-201ENST00000398541 413 ntBASIC2.83□□□□□ -1.96
HMGCS2P54868 MIR1302-8-201ENST00000408342 128 ntBASIC2.83□□□□□ -1.96
HMGCS2P54868 RNA5SP38-201ENST00000410750 119 ntBASIC2.83□□□□□ -1.96
HMGCS2P54868 TMEM167AP1-201ENST00000423409 219 ntBASIC2.83□□□□□ -1.96
HMGCS2P54868 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC2.83□□□□□ -1.96
HMGCS2P54868 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.83□□□□□ -1.96
HMGCS2P54868 AC004866.2-201ENST00000438285 481 ntBASIC2.83□□□□□ -1.96
HMGCS2P54868 AC009969.1-201ENST00000438726 172 ntBASIC2.83□□□□□ -1.96
HMGCS2P54868 MTND2P4-201ENST00000445034 1004 ntBASIC2.83□□□□□ -1.96
HMGCS2P54868 AC093392.2-201ENST00000450682 337 ntBASIC2.83□□□□□ -1.96
HMGCS2P54868 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.83□□□□□ -1.96
HMGCS2P54868 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.83□□□□□ -1.96
HMGCS2P54868 AC104472.2-201ENST00000469035 601 ntBASIC2.83□□□□□ -1.96
HMGCS2P54868 RPL7P5-201ENST00000471472 736 ntBASIC2.83□□□□□ -1.96
HMGCS2P54868 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.83□□□□□ -1.96
HMGCS2P54868 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.83□□□□□ -1.96
HMGCS2P54868 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.83□□□□□ -1.96
HMGCS2P54868 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.83□□□□□ -1.96
HMGCS2P54868 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.83□□□□□ -1.96
HMGCS2P54868 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.83□□□□□ -1.96
HMGCS2P54868 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.83□□□□□ -1.96
HMGCS2P54868 RNU6-237P-201ENST00000515985 71 ntBASIC2.83□□□□□ -1.96
HMGCS2P54868 AL356057.1-201ENST00000533798 831 ntBASIC2.83□□□□□ -1.96
HMGCS2P54868 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.83□□□□□ -1.96
HMGCS2P54868 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HMGCS2P54868 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.83□□□□□ -1.96
HMGCS2P54868 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.83□□□□□ -1.96
HMGCS2P54868 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.83□□□□□ -1.96
HMGCS2P54868 MIR4524B-201ENST00000581569 115 ntBASIC2.83□□□□□ -1.96
HMGCS2P54868 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.83□□□□□ -1.96
HMGCS2P54868 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.83□□□□□ -1.96
HMGCS2P54868 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HMGCS2P54868 AC103810.6-201ENST00000606708 136 ntBASIC2.83□□□□□ -1.96
HMGCS2P54868 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HMGCS2P54868 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HMGCS2P54868 FRG1BP-201ENST00000278882 761 ntBASIC2.82□□□□□ -1.96
HMGCS2P54868 RNU5F-6P-201ENST00000362979 116 ntBASIC2.82□□□□□ -1.96
HMGCS2P54868 RNA5SP456-201ENST00000364002 114 ntBASIC2.82□□□□□ -1.96
HMGCS2P54868 RNU6-501P-201ENST00000364072 100 ntBASIC2.82□□□□□ -1.96
HMGCS2P54868 RNU6-853P-201ENST00000364306 107 ntBASIC2.82□□□□□ -1.96
HMGCS2P54868 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.82□□□□□ -1.96
HMGCS2P54868 SNORD116-1-201ENST00000384335 95 ntBASIC2.82□□□□□ -1.96
HMGCS2P54868 MT-TH-201ENST00000387441 69 ntBASIC2.82□□□□□ -1.96
HMGCS2P54868 SNORA26.8-201ENST00000391306 124 ntBASIC2.82□□□□□ -1.96
HMGCS2P54868 RPS27AP14-201ENST00000422868 454 ntBASIC2.82□□□□□ -1.96
HMGCS2P54868 AC012498.1-201ENST00000424037 437 ntBASIC2.82□□□□□ -1.96
HMGCS2P54868 AL356320.1-201ENST00000429616 163 ntBASIC2.82□□□□□ -1.96
HMGCS2P54868 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.82□□□□□ -1.96
HMGCS2P54868 AC118469.1-201ENST00000442943 488 ntBASIC2.82□□□□□ -1.96
HMGCS2P54868 AL121871.1-201ENST00000443413 436 ntBASIC2.82□□□□□ -1.96
HMGCS2P54868 AL590664.1-201ENST00000448065 339 ntBASIC2.82□□□□□ -1.96
HMGCS2P54868 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.82□□□□□ -1.96
HMGCS2P54868 AC021382.1-201ENST00000483523 359 ntBASIC2.82□□□□□ -1.96
HMGCS2P54868 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.82□□□□□ -1.96
HMGCS2P54868 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
HMGCS2P54868 OR5BM1P-201ENST00000512021 366 ntBASIC2.82□□□□□ -1.96
HMGCS2P54868 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.82□□□□□ -1.96
HMGCS2P54868 RNU6-528P-201ENST00000516926 100 ntBASIC2.82□□□□□ -1.96
HMGCS2P54868 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.82□□□□□ -1.96
HMGCS2P54868 AC060788.1-201ENST00000521318 469 ntBASIC2.82□□□□□ -1.96
HMGCS2P54868 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.82□□□□□ -1.96
HMGCS2P54868 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.82□□□□□ -1.96
HMGCS2P54868 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
HMGCS2P54868 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
HMGCS2P54868 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.82□□□□□ -1.96
HMGCS2P54868 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.82□□□□□ -1.96
HMGCS2P54868 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.82□□□□□ -1.96
HMGCS2P54868 PCMTD1P2-201ENST00000565017 355 ntBASIC2.82□□□□□ -1.96
HMGCS2P54868 AC012414.6-201ENST00000568241 401 ntBASIC2.82□□□□□ -1.96
HMGCS2P54868 AC112187.2-201ENST00000604345 283 ntBASIC2.82□□□□□ -1.96
HMGCS2P54868 AC106900.2-201ENST00000604994 317 ntBASIC2.82□□□□□ -1.96
HMGCS2P54868 AC092354.1-201ENST00000606057 376 ntBASIC2.82□□□□□ -1.96
HMGCS2P54868 AL031775.1-201ENST00000607014 887 ntBASIC2.82□□□□□ -1.96
HMGCS2P54868 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.82□□□□□ -1.96
HMGCS2P54868 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.82□□□□□ -1.96
HMGCS2P54868 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.82□□□□□ -1.96
HMGCS2P54868 MTND5P33-201ENST00000571250 1450 ntBASIC2.82□□□□□ -1.96
HMGCS2P54868 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HMGCS2P54868 AC069528.2-201ENST00000624849 1991 ntBASIC2.81□□□□□ -1.96
HMGCS2P54868 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
HMGCS2P54868 RNU6-97P-201ENST00000363387 104 ntBASIC2.81□□□□□ -1.96
HMGCS2P54868 SNORA14A-201ENST00000364773 135 ntBASIC2.81□□□□□ -1.96
HMGCS2P54868 RNU1-73P-201ENST00000383971 164 ntBASIC2.81□□□□□ -1.96
HMGCS2P54868 U8.14-201ENST00000390843 143 ntBASIC2.81□□□□□ -1.96
HMGCS2P54868 MTCYBP36-201ENST00000404146 440 ntBASIC2.81□□□□□ -1.96
HMGCS2P54868 AL590004.2-201ENST00000404787 371 ntBASIC2.81□□□□□ -1.96
HMGCS2P54868 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.81□□□□□ -1.96
HMGCS2P54868 AL137014.1-201ENST00000420490 1226 ntBASIC2.81□□□□□ -1.96
HMGCS2P54868 DPH3P2-201ENST00000422618 250 ntBASIC2.81□□□□□ -1.96
HMGCS2P54868 CYCSP46-201ENST00000423569 204 ntBASIC2.81□□□□□ -1.96
HMGCS2P54868 AC109583.1-201ENST00000432156 268 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms