Protein–RNA interactions for Protein: P53420

COL4A4, Collagen alpha-4(IV) chain, humanhuman

Predicted RBP Predictions only

Length 1,690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4P53420 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.49□□□□□ -2.01
COL4A4P53420 U73023.1-201ENST00000603134 700 ntBASIC2.49□□□□□ -2.01
COL4A4P53420 AL159169.2-201ENST00000610061 1269 ntBASIC2.49□□□□□ -2.01
COL4A4P53420 AC099778.2-201ENST00000610904 211 ntBASIC2.49□□□□□ -2.01
COL4A4P53420 AC010297.1-201ENST00000623948 149 ntBASIC2.49□□□□□ -2.01
COL4A4P53420 AC099654.14-201ENST00000638599 341 ntBASIC2.49□□□□□ -2.01
COL4A4P53420 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.49□□□□□ -2.01
COL4A4P53420 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.49□□□□□ -2.01
COL4A4P53420 MTCO1P18-201ENST00000455518 1419 ntBASIC2.49□□□□□ -2.01
COL4A4P53420 AC025125.1-201ENST00000624743 1922 ntBASIC2.49□□□□□ -2.01
COL4A4P53420 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
COL4A4P53420 MTND5P26-201ENST00000426018 1752 ntBASIC2.48□□□□□ -2.01
COL4A4P53420 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
COL4A4P53420 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
COL4A4P53420 DEFA7P-201ENST00000382676 285 ntBASIC2.48□□□□□ -2.01
COL4A4P53420 MT-TL1-201ENST00000386347 75 ntBASIC2.48□□□□□ -2.01
COL4A4P53420 RNU6-328P-201ENST00000390887 106 ntBASIC2.48□□□□□ -2.01
COL4A4P53420 DNAJC19P6-201ENST00000401853 280 ntBASIC2.48□□□□□ -2.01
COL4A4P53420 AL023284.1-201ENST00000403956 276 ntBASIC2.48□□□□□ -2.01
COL4A4P53420 AL139421.1-201ENST00000423010 169 ntBASIC2.48□□□□□ -2.01
COL4A4P53420 AL022400.1-201ENST00000423946 935 ntBASIC2.48□□□□□ -2.01
COL4A4P53420 FO393419.3-201ENST00000428741 282 ntBASIC2.48□□□□□ -2.01
COL4A4P53420 AC000111.3-201ENST00000433478 193 ntBASIC2.48□□□□□ -2.01
COL4A4P53420 RAB9AP5-201ENST00000437794 597 ntBASIC2.48□□□□□ -2.01
COL4A4P53420 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.48□□□□□ -2.01
COL4A4P53420 AC092170.1-201ENST00000440211 356 ntBASIC2.48□□□□□ -2.01
COL4A4P53420 RAB9AP2-201ENST00000443911 597 ntBASIC2.48□□□□□ -2.01
COL4A4P53420 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC2.48□□□□□ -2.01
COL4A4P53420 COX6CP12-201ENST00000446748 202 ntBASIC2.48□□□□□ -2.01
COL4A4P53420 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.48□□□□□ -2.01
COL4A4P53420 MTCO3P11-201ENST00000455103 774 ntBASIC2.48□□□□□ -2.01
COL4A4P53420 AC146507.1-201ENST00000468335 354 ntBASIC2.48□□□□□ -2.01
COL4A4P53420 AC069528.1-202ENST00000482888 637 ntBASIC2.48□□□□□ -2.01
COL4A4P53420 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2.48□□□□□ -2.01
COL4A4P53420 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.48□□□□□ -2.01
COL4A4P53420 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.48□□□□□ -2.01
COL4A4P53420 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC2.48□□□□□ -2.01
COL4A4P53420 DEFB108A-201ENST00000530110 222 ntBASIC2.48□□□□□ -2.01
COL4A4P53420 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.48□□□□□ -2.01
COL4A4P53420 MTCO1P40-201ENST00000574371 625 ntBASIC2.48□□□□□ -2.01
COL4A4P53420 AC012360.2-201ENST00000609349 391 ntBASIC2.48□□□□□ -2.01
COL4A4P53420 AL357080.1-201ENST00000617394 239 ntBASIC2.48□□□□□ -2.01
COL4A4P53420 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
COL4A4P53420 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC2.48□□□□□ -2.01
COL4A4P53420 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.48□□□□□ -2.01
COL4A4P53420 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
COL4A4P53420 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
COL4A4P53420 RN7SKP44-201ENST00000363602 316 ntBASIC2.47□□□□□ -2.01
COL4A4P53420 RNU4-91P-201ENST00000364778 135 ntBASIC2.47□□□□□ -2.01
COL4A4P53420 U8.8-201ENST00000365399 135 ntBASIC2.47□□□□□ -2.01
COL4A4P53420 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
COL4A4P53420 RNU6-692P-201ENST00000384496 107 ntBASIC2.47□□□□□ -2.01
COL4A4P53420 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC2.47□□□□□ -2.01
COL4A4P53420 HMGB1P11-201ENST00000413899 637 ntBASIC2.47□□□□□ -2.01
COL4A4P53420 AC007435.1-201ENST00000421086 415 ntBASIC2.47□□□□□ -2.01
COL4A4P53420 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.47□□□□□ -2.01
COL4A4P53420 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.47□□□□□ -2.01
COL4A4P53420 ARF4P2-201ENST00000430209 526 ntBASIC2.47□□□□□ -2.01
COL4A4P53420 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.47□□□□□ -2.01
COL4A4P53420 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
COL4A4P53420 MTCO2P25-201ENST00000447065 681 ntBASIC2.47□□□□□ -2.01
COL4A4P53420 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.47□□□□□ -2.01
COL4A4P53420 AP000705.1-201ENST00000454567 350 ntBASIC2.47□□□□□ -2.01
COL4A4P53420 RPL5P13-201ENST00000462840 709 ntBASIC2.47□□□□□ -2.01
COL4A4P53420 RPS3AP17-201ENST00000472594 777 ntBASIC2.47□□□□□ -2.01
COL4A4P53420 AC008628.2-201ENST00000502605 298 ntBASIC2.47□□□□□ -2.01
COL4A4P53420 AC025459.1-201ENST00000504072 156 ntBASIC2.47□□□□□ -2.01
COL4A4P53420 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.47□□□□□ -2.01
COL4A4P53420 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.47□□□□□ -2.01
COL4A4P53420 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.47□□□□□ -2.01
COL4A4P53420 BNIP3P9-201ENST00000603714 553 ntBASIC2.47□□□□□ -2.01
COL4A4P53420 AC009220.3-201ENST00000604318 586 ntBASIC2.47□□□□□ -2.01
COL4A4P53420 AC018618.2-201ENST00000604770 446 ntBASIC2.47□□□□□ -2.01
COL4A4P53420 AC090578.1-201ENST00000604955 591 ntBASIC2.47□□□□□ -2.01
COL4A4P53420 AC010133.1-201ENST00000615809 842 ntBASIC2.47□□□□□ -2.01
COL4A4P53420 AC002553.4-201ENST00000616896 331 ntBASIC2.47□□□□□ -2.01
COL4A4P53420 AL136221.1-201ENST00000621449 509 ntBASIC2.47□□□□□ -2.01
COL4A4P53420 MIR6766-201ENST00000622641 72 ntBASIC2.47□□□□□ -2.01
COL4A4P53420 MTND1P37-201ENST00000636562 264 ntBASIC2.47□□□□□ -2.01
COL4A4P53420 AC073055.1-201ENST00000456901 1621 ntBASIC2.47□□□□□ -2.01
COL4A4P53420 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.47□□□□□ -2.01
COL4A4P53420 GABPAP-201ENST00000419271 1356 ntBASIC2.47□□□□□ -2.01
COL4A4P53420 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
COL4A4P53420 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
COL4A4P53420 RNU6-931P-201ENST00000363850 107 ntBASIC2.47□□□□□ -2.01
COL4A4P53420 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
COL4A4P53420 RNU6-1011P-201ENST00000384668 107 ntBASIC2.47□□□□□ -2.01
COL4A4P53420 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.47□□□□□ -2.01
COL4A4P53420 AC098592.2-201ENST00000413158 265 ntBASIC2.47□□□□□ -2.01
COL4A4P53420 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.47□□□□□ -2.01
COL4A4P53420 MTCO3P1-205ENST00000422088 832 ntBASIC2.47□□□□□ -2.01
COL4A4P53420 AC010975.2-201ENST00000427781 588 ntBASIC2.47□□□□□ -2.01
COL4A4P53420 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.47□□□□□ -2.01
COL4A4P53420 MTCO2P11-201ENST00000431069 680 ntBASIC2.47□□□□□ -2.01
COL4A4P53420 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC2.47□□□□□ -2.01
COL4A4P53420 RPL23AP16-201ENST00000441715 421 ntBASIC2.47□□□□□ -2.01
COL4A4P53420 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.47□□□□□ -2.01
COL4A4P53420 AC079776.3-201ENST00000450665 370 ntBASIC2.47□□□□□ -2.01
COL4A4P53420 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.47□□□□□ -2.01
COL4A4P53420 MTCO2P30-201ENST00000503662 364 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms