Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLK1P49759 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CLK1P49759 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.17□□□□□ -1.9
CLK1P49759 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.17□□□□□ -1.9
CLK1P49759 Y_RNA.248-201ENST00000364501 109 ntBASIC3.17□□□□□ -1.9
CLK1P49759 RNU6-1078P-201ENST00000364522 103 ntBASIC3.17□□□□□ -1.9
CLK1P49759 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.17□□□□□ -1.9
CLK1P49759 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CLK1P49759 Y_RNA.554-201ENST00000384672 102 ntBASIC3.17□□□□□ -1.9
CLK1P49759 MIR200C-201ENST00000384980 68 ntBASIC3.17□□□□□ -1.9
CLK1P49759 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CLK1P49759 MIR320C1-201ENST00000408566 88 ntBASIC3.17□□□□□ -1.9
CLK1P49759 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.17□□□□□ -1.9
CLK1P49759 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.17□□□□□ -1.9
CLK1P49759 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.17□□□□□ -1.9
CLK1P49759 UBE2V1P8-201ENST00000437166 265 ntBASIC3.17□□□□□ -1.9
CLK1P49759 PIGFP3-201ENST00000441918 722 ntBASIC3.17□□□□□ -1.9
CLK1P49759 DDX3P2-201ENST00000446138 111 ntBASIC3.17□□□□□ -1.9
CLK1P49759 AP000542.1-201ENST00000448473 371 ntBASIC3.17□□□□□ -1.9
CLK1P49759 RBMY2UP-201ENST00000453474 324 ntBASIC3.17□□□□□ -1.9
CLK1P49759 AP1S2P1-201ENST00000457344 379 ntBASIC3.17□□□□□ -1.9
CLK1P49759 RN7SL542P-201ENST00000467147 294 ntBASIC3.17□□□□□ -1.9
CLK1P49759 AC024589.1-201ENST00000512207 263 ntBASIC3.17□□□□□ -1.9
CLK1P49759 AC034159.1-201ENST00000513885 583 ntBASIC3.17□□□□□ -1.9
CLK1P49759 RNU6-1178P-201ENST00000516674 107 ntBASIC3.17□□□□□ -1.9
CLK1P49759 RNU6-430P-201ENST00000517078 107 ntBASIC3.17□□□□□ -1.9
CLK1P49759 AC026403.1-201ENST00000518938 295 ntBASIC3.17□□□□□ -1.9
CLK1P49759 MTND4LP18-201ENST00000526864 291 ntBASIC3.17□□□□□ -1.9
CLK1P49759 AP003122.4-201ENST00000530980 758 ntBASIC3.17□□□□□ -1.9
CLK1P49759 AL133241.1-201ENST00000556832 487 ntBASIC3.17□□□□□ -1.9
CLK1P49759 AC025281.1-201ENST00000567026 265 ntBASIC3.17□□□□□ -1.9
CLK1P49759 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.17□□□□□ -1.9
CLK1P49759 AC245517.5-201ENST00000611529 162 ntBASIC3.17□□□□□ -1.9
CLK1P49759 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CLK1P49759 AC093838.1-201ENST00000613014 469 ntBASIC3.17□□□□□ -1.9
CLK1P49759 AC034102.8-201ENST00000615146 484 ntBASIC3.17□□□□□ -1.9
CLK1P49759 AP001506.1-201ENST00000615444 211 ntBASIC3.17□□□□□ -1.9
CLK1P49759 U4.5-201ENST00000617137 123 ntBASIC3.17□□□□□ -1.9
CLK1P49759 AC039056.2-201ENST00000622261 511 ntBASIC3.17□□□□□ -1.9
CLK1P49759 SEPT14P19-203ENST00000633205 211 ntBASIC3.17□□□□□ -1.9
CLK1P49759 OR5AK4P-201ENST00000635912 903 ntBASIC3.17□□□□□ -1.9
CLK1P49759 AL034408.1-202ENST00000636088 415 ntBASIC3.17□□□□□ -1.9
CLK1P49759 AC244258.1-201ENST00000637553 1071 ntBASIC3.17□□□□□ -1.9
CLK1P49759 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.17□□□□□ -1.9
CLK1P49759 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CLK1P49759 AC135776.4-201ENST00000624300 1904 ntBASIC3.17□□□□□ -1.9
CLK1P49759 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.16□□□□□ -1.9
CLK1P49759 CCT4P2-201ENST00000233836 1548 ntBASIC3.16□□□□□ -1.9
CLK1P49759 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CLK1P49759 Y_RNA.234-201ENST00000364409 97 ntBASIC3.16□□□□□ -1.9
CLK1P49759 U3.11-201ENST00000364476 212 ntBASIC3.16□□□□□ -1.9
CLK1P49759 RNU6-359P-201ENST00000365466 108 ntBASIC3.16□□□□□ -1.9
CLK1P49759 SET-203ENST00000372688 801 ntTSL 2 BASIC3.16□□□□□ -1.9
CLK1P49759 RNU5A-6P-201ENST00000384136 116 ntBASIC3.16□□□□□ -1.9
CLK1P49759 SNORD115.1-201ENST00000391109 76 ntBASIC3.16□□□□□ -1.9
CLK1P49759 RPL17P50-201ENST00000396131 546 ntBASIC3.16□□□□□ -1.9
CLK1P49759 AL356057.2-201ENST00000403318 432 ntBASIC3.16□□□□□ -1.9
CLK1P49759 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CLK1P49759 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.16□□□□□ -1.9
CLK1P49759 RPS3AP3-201ENST00000411933 242 ntBASIC3.16□□□□□ -1.9
CLK1P49759 AC022028.1-201ENST00000412054 408 ntBASIC3.16□□□□□ -1.9
CLK1P49759 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.16□□□□□ -1.9
CLK1P49759 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.16□□□□□ -1.9
CLK1P49759 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.16□□□□□ -1.9
CLK1P49759 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.16□□□□□ -1.9
CLK1P49759 MTND3P21-201ENST00000433774 331 ntBASIC3.16□□□□□ -1.9
CLK1P49759 MTND6P13-201ENST00000443510 523 ntBASIC3.16□□□□□ -1.9
CLK1P49759 RPL7P36-201ENST00000444633 681 ntBASIC3.16□□□□□ -1.9
CLK1P49759 AC002381.1-201ENST00000447049 280 ntBASIC3.16□□□□□ -1.9
CLK1P49759 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.16□□□□□ -1.9
CLK1P49759 PAXBP1P1-201ENST00000449315 447 ntBASIC3.16□□□□□ -1.9
CLK1P49759 MTCO1P42-201ENST00000457379 726 ntBASIC3.16□□□□□ -1.9
CLK1P49759 snoU109.1-201ENST00000459339 135 ntBASIC3.16□□□□□ -1.9
CLK1P49759 RPS20P20-201ENST00000460498 340 ntBASIC3.16□□□□□ -1.9
CLK1P49759 AL672167.3-201ENST00000465951 960 ntBASIC3.16□□□□□ -1.9
CLK1P49759 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CLK1P49759 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
CLK1P49759 AC098799.2-201ENST00000509466 868 ntBASIC3.16□□□□□ -1.9
CLK1P49759 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.16□□□□□ -1.9
CLK1P49759 SAP18P1-201ENST00000512058 390 ntBASIC3.16□□□□□ -1.9
CLK1P49759 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.16□□□□□ -1.9
CLK1P49759 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
CLK1P49759 AC023632.4-201ENST00000517783 191 ntBASIC3.16□□□□□ -1.9
CLK1P49759 AC245166.1-201ENST00000521012 253 ntBASIC3.16□□□□□ -1.9
CLK1P49759 ATP5F1P5-201ENST00000526403 760 ntBASIC3.16□□□□□ -1.9
CLK1P49759 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.16□□□□□ -1.9
CLK1P49759 AC234778.2-201ENST00000566241 354 ntBASIC3.16□□□□□ -1.9
CLK1P49759 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.16□□□□□ -1.9
CLK1P49759 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.16□□□□□ -1.9
CLK1P49759 AC138761.3-201ENST00000579993 334 ntBASIC3.16□□□□□ -1.9
CLK1P49759 AL606834.2-201ENST00000602954 668 ntBASIC3.16□□□□□ -1.9
CLK1P49759 BBIP1P1-201ENST00000602999 279 ntBASIC3.16□□□□□ -1.9
CLK1P49759 AL022154.1-201ENST00000604698 785 ntBASIC3.16□□□□□ -1.9
CLK1P49759 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.16□□□□□ -1.9
CLK1P49759 AC091965.4-201ENST00000607691 587 ntBASIC3.16□□□□□ -1.9
CLK1P49759 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CLK1P49759 AC008250.2-201ENST00000615261 205 ntBASIC3.16□□□□□ -1.9
CLK1P49759 AC108479.2-201ENST00000617314 601 ntBASIC3.16□□□□□ -1.9
CLK1P49759 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.16□□□□□ -1.9
CLK1P49759 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms