Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.91□□□□□ -1.62
CHRNA4P43681 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CHRNA4P43681 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CHRNA4P43681 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CHRNA4P43681 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CHRNA4P43681 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.91□□□□□ -1.62
CHRNA4P43681 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.91□□□□□ -1.62
CHRNA4P43681 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CHRNA4P43681 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CHRNA4P43681 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CHRNA4P43681 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CHRNA4P43681 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CHRNA4P43681 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
CHRNA4P43681 Y_RNA.71-201ENST00000362892 104 ntBASIC4.9□□□□□ -1.63
CHRNA4P43681 Y_RNA.308-201ENST00000365043 101 ntBASIC4.9□□□□□ -1.63
CHRNA4P43681 SNORD63-201ENST00000384262 68 ntBASIC4.9□□□□□ -1.63
CHRNA4P43681 RNU6-1226P-201ENST00000384317 107 ntBASIC4.9□□□□□ -1.63
CHRNA4P43681 SNORA40-201ENST00000388090 126 ntBASIC4.9□□□□□ -1.63
CHRNA4P43681 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CHRNA4P43681 RNU6-754P-201ENST00000391166 107 ntBASIC4.9□□□□□ -1.63
CHRNA4P43681 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CHRNA4P43681 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.9□□□□□ -1.63
CHRNA4P43681 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.9□□□□□ -1.63
CHRNA4P43681 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.9□□□□□ -1.63
CHRNA4P43681 AL160275.3-201ENST00000423876 471 ntBASIC4.9□□□□□ -1.63
CHRNA4P43681 OR2AH1P-201ENST00000425717 928 ntBASIC4.9□□□□□ -1.63
CHRNA4P43681 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.9□□□□□ -1.63
CHRNA4P43681 TBCAP1-201ENST00000436520 327 ntBASIC4.9□□□□□ -1.63
CHRNA4P43681 GAPDHP27-201ENST00000447427 1020 ntBASIC4.9□□□□□ -1.63
CHRNA4P43681 AC010733.1-201ENST00000451515 401 ntBASIC4.9□□□□□ -1.63
CHRNA4P43681 RPL37P6-201ENST00000460682 294 ntBASIC4.9□□□□□ -1.63
CHRNA4P43681 RN7SL329P-201ENST00000467740 299 ntBASIC4.9□□□□□ -1.63
CHRNA4P43681 COX7A2P2-201ENST00000505291 250 ntBASIC4.9□□□□□ -1.63
CHRNA4P43681 AC016065.2-201ENST00000514530 444 ntBASIC4.9□□□□□ -1.63
CHRNA4P43681 AC104057.1-201ENST00000515547 497 ntBASIC4.9□□□□□ -1.63
CHRNA4P43681 RNA5SP249-201ENST00000516127 99 ntBASIC4.9□□□□□ -1.63
CHRNA4P43681 RNU6-1012P-201ENST00000516606 109 ntBASIC4.9□□□□□ -1.63
CHRNA4P43681 MIR2355-201ENST00000517199 87 ntBASIC4.9□□□□□ -1.63
CHRNA4P43681 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CHRNA4P43681 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.9□□□□□ -1.63
CHRNA4P43681 AC093249.4-201ENST00000564755 259 ntBASIC4.9□□□□□ -1.63
CHRNA4P43681 AC087783.2-201ENST00000605070 562 ntBASIC4.9□□□□□ -1.63
CHRNA4P43681 AL008718.3-201ENST00000610217 321 ntBASIC4.9□□□□□ -1.63
CHRNA4P43681 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.9□□□□□ -1.63
CHRNA4P43681 AC084757.4-201ENST00000616350 526 ntBASIC4.9□□□□□ -1.63
CHRNA4P43681 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.9□□□□□ -1.63
CHRNA4P43681 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CHRNA4P43681 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.9□□□□□ -1.63
CHRNA4P43681 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CHRNA4P43681 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
CHRNA4P43681 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
CHRNA4P43681 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.89□□□□□ -1.63
CHRNA4P43681 AC000374.1-201ENST00000434698 1745 ntBASIC4.89□□□□□ -1.63
CHRNA4P43681 INTS6P1-201ENST00000504674 2530 ntBASIC4.89□□□□□ -1.63
CHRNA4P43681 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CHRNA4P43681 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CHRNA4P43681 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CHRNA4P43681 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CHRNA4P43681 UBE2WP1-201ENST00000362030 340 ntBASIC4.89□□□□□ -1.63
CHRNA4P43681 SNORD82-201ENST00000365530 70 ntBASIC4.89□□□□□ -1.63
CHRNA4P43681 RNU6-701P-201ENST00000384059 107 ntBASIC4.89□□□□□ -1.63
CHRNA4P43681 SNORA51.8-201ENST00000384234 132 ntBASIC4.89□□□□□ -1.63
CHRNA4P43681 MIR585-201ENST00000384887 94 ntBASIC4.89□□□□□ -1.63
CHRNA4P43681 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CHRNA4P43681 AL645927.1-201ENST00000396783 406 ntBASIC4.89□□□□□ -1.63
CHRNA4P43681 AL590704.1-201ENST00000402856 794 ntBASIC4.89□□□□□ -1.63
CHRNA4P43681 RNU2-15P-201ENST00000410692 191 ntBASIC4.89□□□□□ -1.63
CHRNA4P43681 RPL37P18-201ENST00000411602 243 ntBASIC4.89□□□□□ -1.63
CHRNA4P43681 AC092809.3-201ENST00000415453 231 ntBASIC4.89□□□□□ -1.63
CHRNA4P43681 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.89□□□□□ -1.63
CHRNA4P43681 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.89□□□□□ -1.63
CHRNA4P43681 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.89□□□□□ -1.63
CHRNA4P43681 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.89□□□□□ -1.63
CHRNA4P43681 PTGES3P4-201ENST00000426243 356 ntBASIC4.89□□□□□ -1.63
CHRNA4P43681 PPIAP13-201ENST00000434706 478 ntBASIC4.89□□□□□ -1.63
CHRNA4P43681 AL772161.1-201ENST00000439130 476 ntBASIC4.89□□□□□ -1.63
CHRNA4P43681 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.89□□□□□ -1.63
CHRNA4P43681 SNORD2.1-201ENST00000458762 69 ntBASIC4.89□□□□□ -1.63
CHRNA4P43681 AC010326.1-201ENST00000462726 602 ntBASIC4.89□□□□□ -1.63
CHRNA4P43681 AC006511.1-201ENST00000470614 315 ntBASIC4.89□□□□□ -1.63
CHRNA4P43681 HMGB3P16-201ENST00000508037 287 ntBASIC4.89□□□□□ -1.63
CHRNA4P43681 RNU6-709P-201ENST00000517257 104 ntBASIC4.89□□□□□ -1.63
CHRNA4P43681 CYCSP26-201ENST00000534107 320 ntBASIC4.89□□□□□ -1.63
CHRNA4P43681 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.89□□□□□ -1.63
CHRNA4P43681 AC008033.2-201ENST00000542626 177 ntBASIC4.89□□□□□ -1.63
CHRNA4P43681 AC023824.2-201ENST00000566185 400 ntBASIC4.89□□□□□ -1.63
CHRNA4P43681 BDH2P1-201ENST00000602288 736 ntBASIC4.89□□□□□ -1.63
CHRNA4P43681 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.89□□□□□ -1.63
CHRNA4P43681 Y_RNA.802-201ENST00000614892 130 ntBASIC4.89□□□□□ -1.63
CHRNA4P43681 IGHVIII-44-202ENST00000636235 289 ntBASIC4.89□□□□□ -1.63
CHRNA4P43681 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
CHRNA4P43681 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.89□□□□□ -1.63
CHRNA4P43681 AL672167.1-205ENST00000641112 3080 ntBASIC4.89□□□□□ -1.63
CHRNA4P43681 AC010332.2-201ENST00000613083 1904 ntBASIC4.89□□□□□ -1.63
CHRNA4P43681 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CHRNA4P43681 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CHRNA4P43681 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CHRNA4P43681 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CHRNA4P43681 Y_RNA.358-201ENST00000365491 99 ntBASIC4.88□□□□□ -1.63
CHRNA4P43681 MIR186-201ENST00000384988 86 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms