Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AC090970.3-201ENST00000612566 866 ntBASIC3.23□□□□□ -1.89
MTHFRP42898 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.23□□□□□ -1.89
MTHFRP42898 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.23□□□□□ -1.89
MTHFRP42898 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
MTHFRP42898 AL136360.1-201ENST00000503377 1900 ntBASIC3.23□□□□□ -1.89
MTHFRP42898 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
MTHFRP42898 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
MTHFRP42898 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.22□□□□□ -1.89
MTHFRP42898 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.22□□□□□ -1.89
MTHFRP42898 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
MTHFRP42898 Y_RNA.608-201ENST00000410647 95 ntBASIC3.22□□□□□ -1.89
MTHFRP42898 RNA5SP184-201ENST00000411071 108 ntBASIC3.22□□□□□ -1.89
MTHFRP42898 RPL21P24-201ENST00000413752 448 ntBASIC3.22□□□□□ -1.89
MTHFRP42898 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.22□□□□□ -1.89
MTHFRP42898 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.22□□□□□ -1.89
MTHFRP42898 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.22□□□□□ -1.89
MTHFRP42898 TIMM9P1-201ENST00000436122 256 ntBASIC3.22□□□□□ -1.89
MTHFRP42898 AC129850.1-201ENST00000436203 508 ntBASIC3.22□□□□□ -1.89
MTHFRP42898 AL135938.1-201ENST00000443141 297 ntBASIC3.22□□□□□ -1.89
MTHFRP42898 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.22□□□□□ -1.89
MTHFRP42898 SNRPGP9-201ENST00000456025 225 ntBASIC3.22□□□□□ -1.89
MTHFRP42898 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
MTHFRP42898 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.22□□□□□ -1.89
MTHFRP42898 FABP5P5-201ENST00000515537 406 ntBASIC3.22□□□□□ -1.89
MTHFRP42898 RNU6-390P-201ENST00000516259 103 ntBASIC3.22□□□□□ -1.89
MTHFRP42898 RNU6-1256P-201ENST00000516539 103 ntBASIC3.22□□□□□ -1.89
MTHFRP42898 AC068657.1-201ENST00000520807 306 ntBASIC3.22□□□□□ -1.89
MTHFRP42898 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
MTHFRP42898 DEFB108A-201ENST00000530110 222 ntBASIC3.22□□□□□ -1.89
MTHFRP42898 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.22□□□□□ -1.89
MTHFRP42898 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.22□□□□□ -1.89
MTHFRP42898 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.22□□□□□ -1.89
MTHFRP42898 AC123904.3-201ENST00000547218 814 ntBASIC3.22□□□□□ -1.89
MTHFRP42898 AC124947.2-202ENST00000552735 133 ntBASIC3.22□□□□□ -1.89
MTHFRP42898 AL355836.1-201ENST00000555951 870 ntBASIC3.22□□□□□ -1.89
MTHFRP42898 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.22□□□□□ -1.89
MTHFRP42898 AC012414.6-201ENST00000568241 401 ntBASIC3.22□□□□□ -1.89
MTHFRP42898 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.22□□□□□ -1.89
MTHFRP42898 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.22□□□□□ -1.89
MTHFRP42898 AC112191.3-201ENST00000604371 277 ntBASIC3.22□□□□□ -1.89
MTHFRP42898 NUTF2P8-201ENST00000604593 363 ntBASIC3.22□□□□□ -1.89
MTHFRP42898 AC239868.4-201ENST00000608318 671 ntBASIC3.22□□□□□ -1.89
MTHFRP42898 AC245517.5-201ENST00000611529 162 ntBASIC3.22□□□□□ -1.89
MTHFRP42898 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.22□□□□□ -1.89
MTHFRP42898 AC025048.6-202ENST00000627667 438 ntBASIC3.22□□□□□ -1.89
MTHFRP42898 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
MTHFRP42898 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
MTHFRP42898 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
MTHFRP42898 AC022336.2-201ENST00000568966 2538 ntBASIC3.22□□□□□ -1.89
MTHFRP42898 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
MTHFRP42898 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
MTHFRP42898 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
MTHFRP42898 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
MTHFRP42898 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.21□□□□□ -1.9
MTHFRP42898 U3.4-201ENST00000363352 213 ntBASIC3.21□□□□□ -1.9
MTHFRP42898 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
MTHFRP42898 SNORD115.1-201ENST00000391109 76 ntBASIC3.21□□□□□ -1.9
MTHFRP42898 NDUFB4P5-201ENST00000415445 361 ntBASIC3.21□□□□□ -1.9
MTHFRP42898 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.21□□□□□ -1.9
MTHFRP42898 AC244035.1-201ENST00000430042 390 ntBASIC3.21□□□□□ -1.9
MTHFRP42898 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
MTHFRP42898 AC105272.1-201ENST00000438604 198 ntBASIC3.21□□□□□ -1.9
MTHFRP42898 AC005094.1-201ENST00000440420 368 ntBASIC3.21□□□□□ -1.9
MTHFRP42898 RPS24P13-201ENST00000442520 397 ntBASIC3.21□□□□□ -1.9
MTHFRP42898 SNRPGP6-201ENST00000451124 220 ntBASIC3.21□□□□□ -1.9
MTHFRP42898 AC010099.1-201ENST00000455434 375 ntBASIC3.21□□□□□ -1.9
MTHFRP42898 AC108059.3-201ENST00000456388 214 ntBASIC3.21□□□□□ -1.9
MTHFRP42898 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.21□□□□□ -1.9
MTHFRP42898 RPS29P26-201ENST00000477483 171 ntBASIC3.21□□□□□ -1.9
MTHFRP42898 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.21□□□□□ -1.9
MTHFRP42898 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.21□□□□□ -1.9
MTHFRP42898 AC114797.1-201ENST00000514003 728 ntBASIC3.21□□□□□ -1.9
MTHFRP42898 RNA5SP385-201ENST00000515947 110 ntBASIC3.21□□□□□ -1.9
MTHFRP42898 RNU6-56P-201ENST00000516986 93 ntBASIC3.21□□□□□ -1.9
MTHFRP42898 RNU6-64P-201ENST00000517119 105 ntBASIC3.21□□□□□ -1.9
MTHFRP42898 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.21□□□□□ -1.9
MTHFRP42898 MIR3146-201ENST00000580367 79 ntBASIC3.21□□□□□ -1.9
MTHFRP42898 AC013553.2-201ENST00000604244 589 ntBASIC3.21□□□□□ -1.9
MTHFRP42898 AC121334.2-201ENST00000605387 271 ntBASIC3.21□□□□□ -1.9
MTHFRP42898 AL451064.1-201ENST00000607718 471 ntBASIC3.21□□□□□ -1.9
MTHFRP42898 AC010133.1-201ENST00000615809 842 ntBASIC3.21□□□□□ -1.9
MTHFRP42898 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.21□□□□□ -1.9
MTHFRP42898 AC010680.1-201ENST00000590024 3590 ntBASIC3.21□□□□□ -1.9
MTHFRP42898 ELL2P3-201ENST00000457883 1602 ntBASIC3.21□□□□□ -1.9
MTHFRP42898 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.21□□□□□ -1.9
MTHFRP42898 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.21□□□□□ -1.9
MTHFRP42898 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
MTHFRP42898 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
MTHFRP42898 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.2□□□□□ -1.9
MTHFRP42898 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
MTHFRP42898 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
MTHFRP42898 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.2□□□□□ -1.9
MTHFRP42898 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
MTHFRP42898 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
MTHFRP42898 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
MTHFRP42898 RNY4P16-201ENST00000364768 94 ntBASIC3.2□□□□□ -1.9
MTHFRP42898 RNU6-851P-201ENST00000384565 107 ntBASIC3.2□□□□□ -1.9
MTHFRP42898 RNY3P10-201ENST00000384764 102 ntBASIC3.2□□□□□ -1.9
MTHFRP42898 RNU6-278P-201ENST00000390945 109 ntBASIC3.2□□□□□ -1.9
MTHFRP42898 FCF1P10-201ENST00000407590 479 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms