Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AL137003.2-201ENST00000606924 2538 ntBASIC0.74□□□□□ -2.29
HTTP42858 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
HTTP42858 MIR4716-201ENST00000579628 84 ntBASIC0.74□□□□□ -2.29
HTTP42858 DUXAP4-201ENST00000603046 613 ntBASIC0.74□□□□□ -2.29
HTTP42858 AC013244.3-201ENST00000605614 388 ntBASIC0.74□□□□□ -2.29
HTTP42858 Y_RNA.170-201ENST00000363746 110 ntBASIC0.73□□□□□ -2.29
HTTP42858 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC0.73□□□□□ -2.29
HTTP42858 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC0.73□□□□□ -2.29
HTTP42858 AL357134.1-201ENST00000445848 426 ntBASIC0.73□□□□□ -2.29
HTTP42858 AC098583.1-201ENST00000480875 255 ntBASIC0.73□□□□□ -2.29
HTTP42858 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC0.73□□□□□ -2.29
HTTP42858 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.73□□□□□ -2.29
HTTP42858 AL138976.2-201ENST00000563989 694 ntBASIC0.73□□□□□ -2.29
HTTP42858 AP006248.3-201ENST00000623580 594 ntBASIC0.73□□□□□ -2.29
HTTP42858 MIR4278-201ENST00000636094 69 ntBASIC0.73□□□□□ -2.29
HTTP42858 AL390862.1-201ENST00000635467 1469 ntBASIC0.73□□□□□ -2.29
HTTP42858 MIR329-1-201ENST00000385028 80 ntBASIC0.73□□□□□ -2.29
HTTP42858 AC079780.1-201ENST00000428259 207 ntBASIC0.73□□□□□ -2.29
HTTP42858 AC243772.1-201ENST00000451620 410 ntBASIC0.73□□□□□ -2.29
HTTP42858 AC009901.1-201ENST00000506703 541 ntBASIC0.73□□□□□ -2.29
HTTP42858 AC010625.1-201ENST00000511296 403 ntBASIC0.73□□□□□ -2.29
HTTP42858 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.73□□□□□ -2.29
HTTP42858 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC0.73□□□□□ -2.29
HTTP42858 MTND4LP24-201ENST00000572277 291 ntBASIC0.73□□□□□ -2.29
HTTP42858 AC140725.3-201ENST00000616193 880 ntBASIC0.73□□□□□ -2.29
HTTP42858 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC0.73□□□□□ -2.29
HTTP42858 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC0.73□□□□□ -2.29
HTTP42858 BTF3P12-201ENST00000519620 469 ntBASIC0.73□□□□□ -2.29
HTTP42858 CASP1P1-201ENST00000526345 212 ntBASIC0.73□□□□□ -2.29
HTTP42858 AC093510.2-201ENST00000562820 896 ntBASIC0.73□□□□□ -2.29
HTTP42858 AC114546.3-201ENST00000623582 1734 ntBASIC0.72□□□□□ -2.29
HTTP42858 MIR124-3-201ENST00000384866 87 ntBASIC0.72□□□□□ -2.29
HTTP42858 MIR524-201ENST00000385242 87 ntBASIC0.72□□□□□ -2.29
HTTP42858 RNU2-70P-201ENST00000410718 179 ntBASIC0.72□□□□□ -2.29
HTTP42858 AC092745.2-202ENST00000411880 369 ntBASIC0.72□□□□□ -2.29
HTTP42858 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC0.72□□□□□ -2.29
HTTP42858 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.72□□□□□ -2.29
HTTP42858 AL121769.1-201ENST00000469473 401 ntBASIC0.72□□□□□ -2.29
HTTP42858 EIF4A1P12-201ENST00000551910 141 ntBASIC0.72□□□□□ -2.29
HTTP42858 AC091812.1-201ENST00000432235 1948 ntBASIC0.72□□□□□ -2.29
HTTP42858 XKRY2-202ENST00000623874 1581 ntBASIC0.72□□□□□ -2.29
HTTP42858 XKRY-202ENST00000624960 1581 ntBASIC0.72□□□□□ -2.29
HTTP42858 AC011155.1-201ENST00000316512 456 ntBASIC0.71□□□□□ -2.3
HTTP42858 AL356057.2-201ENST00000403318 432 ntBASIC0.71□□□□□ -2.3
HTTP42858 RNA5SP266-201ENST00000410273 108 ntBASIC0.71□□□□□ -2.3
HTTP42858 RNU2-41P-201ENST00000410991 178 ntBASIC0.71□□□□□ -2.3
HTTP42858 RPL21P24-201ENST00000413752 448 ntBASIC0.71□□□□□ -2.3
HTTP42858 VN1R42P-201ENST00000424651 344 ntBASIC0.71□□□□□ -2.3
HTTP42858 AL161651.1-201ENST00000440882 223 ntBASIC0.71□□□□□ -2.3
HTTP42858 HMGN2P10-201ENST00000448085 265 ntBASIC0.71□□□□□ -2.3
HTTP42858 AC010735.1-201ENST00000567305 1026 ntBASIC0.71□□□□□ -2.3
HTTP42858 AC012557.2-201ENST00000605919 418 ntBASIC0.71□□□□□ -2.3
HTTP42858 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
HTTP42858 AL589743.1-201ENST00000551932 2712 ntBASIC0.71□□□□□ -2.3
HTTP42858 RNU6-1164P-201ENST00000364428 107 ntBASIC0.71□□□□□ -2.3
HTTP42858 SNORA67.1-201ENST00000364749 141 ntBASIC0.71□□□□□ -2.3
HTTP42858 RNU6-43P-201ENST00000384302 107 ntBASIC0.71□□□□□ -2.3
HTTP42858 RNU6-955P-201ENST00000410497 104 ntBASIC0.71□□□□□ -2.3
HTTP42858 AC092447.6-201ENST00000414578 210 ntBASIC0.71□□□□□ -2.3
HTTP42858 AC106901.1-201ENST00000425086 698 ntBASIC0.71□□□□□ -2.3
HTTP42858 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
HTTP42858 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
HTTP42858 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
HTTP42858 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
HTTP42858 AP003484.1-201ENST00000530974 250 ntBASIC0.71□□□□□ -2.3
HTTP42858 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.71□□□□□ -2.3
HTTP42858 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.71□□□□□ -2.3
HTTP42858 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC0.71□□□□□ -2.3
HTTP42858 AC010099.1-201ENST00000455434 375 ntBASIC0.71□□□□□ -2.3
HTTP42858 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.71□□□□□ -2.3
HTTP42858 RPS27P21-201ENST00000486977 252 ntBASIC0.71□□□□□ -2.3
HTTP42858 AC117454.1-201ENST00000491120 168 ntBASIC0.71□□□□□ -2.3
HTTP42858 RNU6-229P-201ENST00000516614 102 ntBASIC0.71□□□□□ -2.3
HTTP42858 SNORD114-15-201ENST00000364687 72 ntBASIC0.7□□□□□ -2.3
HTTP42858 PTP4A1P1-201ENST00000420539 515 ntBASIC0.7□□□□□ -2.3
HTTP42858 SNORA31.25-201ENST00000517242 134 ntBASIC0.7□□□□□ -2.3
HTTP42858 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC0.7□□□□□ -2.3
HTTP42858 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.7□□□□□ -2.3
HTTP42858 MIR4514-201ENST00000581410 57 ntBASIC0.7□□□□□ -2.3
HTTP42858 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.7□□□□□ -2.3
HTTP42858 HAUS6P2-201ENST00000433254 2404 ntBASIC0.7□□□□□ -2.3
HTTP42858 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC0.7□□□□□ -2.3
HTTP42858 DBF4P1-201ENST00000412976 1892 ntBASIC0.7□□□□□ -2.3
HTTP42858 MIR508-201ENST00000384857 115 ntBASIC0.7□□□□□ -2.3
HTTP42858 TRAPPC2P10-201ENST00000415662 323 ntBASIC0.7□□□□□ -2.3
HTTP42858 TRBV25OR9-2-201ENST00000438417 374 ntBASIC0.7□□□□□ -2.3
HTTP42858 RAB9AP2-201ENST00000443911 597 ntBASIC0.7□□□□□ -2.3
HTTP42858 HSPE1P24-201ENST00000450782 238 ntBASIC0.7□□□□□ -2.3
HTTP42858 MTCO1P47-201ENST00000523889 1271 ntBASIC0.7□□□□□ -2.3
HTTP42858 MIR4474-201ENST00000579189 78 ntBASIC0.7□□□□□ -2.3
HTTP42858 FAM106CP-201ENST00000582212 507 ntBASIC0.7□□□□□ -2.3
HTTP42858 AL161912.3-201ENST00000605404 628 ntBASIC0.7□□□□□ -2.3
HTTP42858 AC087045.1-201ENST00000605856 382 ntBASIC0.7□□□□□ -2.3
HTTP42858 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC0.69□□□□□ -2.3
HTTP42858 CYCSP26-201ENST00000534107 320 ntBASIC0.69□□□□□ -2.3
HTTP42858 AL078605.1-201ENST00000603529 500 ntBASIC0.69□□□□□ -2.3
HTTP42858 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
HTTP42858 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.69□□□□□ -2.3
HTTP42858 AC096745.1-201ENST00000509945 370 ntBASIC0.69□□□□□ -2.3
HTTP42858 AC022880.1-201ENST00000534017 973 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms