Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.17□□□□□ -2.06
SCN4AP35499 AC109486.1-201ENST00000486833 374 ntBASIC2.17□□□□□ -2.06
SCN4AP35499 AC090453.1-201ENST00000495560 436 ntBASIC2.17□□□□□ -2.06
SCN4AP35499 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.17□□□□□ -2.06
SCN4AP35499 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.17□□□□□ -2.06
SCN4AP35499 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.17□□□□□ -2.06
SCN4AP35499 AP004371.1-201ENST00000525240 214 ntBASIC2.17□□□□□ -2.06
SCN4AP35499 MTCYBP41-201ENST00000528913 1123 ntBASIC2.17□□□□□ -2.06
SCN4AP35499 AC007115.1-201ENST00000546853 234 ntBASIC2.17□□□□□ -2.06
SCN4AP35499 AC025588.3-201ENST00000604182 274 ntBASIC2.17□□□□□ -2.06
SCN4AP35499 MIR502-201ENST00000606349 86 ntBASIC2.17□□□□□ -2.06
SCN4AP35499 AC090425.2-201ENST00000608818 501 ntBASIC2.17□□□□□ -2.06
SCN4AP35499 AL391834.2-201ENST00000609982 546 ntBASIC2.17□□□□□ -2.06
SCN4AP35499 AL138880.2-201ENST00000616214 239 ntBASIC2.17□□□□□ -2.06
SCN4AP35499 RMST_2.1-201ENST00000617263 136 ntBASIC2.17□□□□□ -2.06
SCN4AP35499 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.17□□□□□ -2.06
SCN4AP35499 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SCN4AP35499 AP002907.1-201ENST00000606361 1430 ntBASIC2.17□□□□□ -2.06
SCN4AP35499 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC2.17□□□□□ -2.06
SCN4AP35499 RNU6-50P-201ENST00000362356 103 ntBASIC2.17□□□□□ -2.06
SCN4AP35499 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
SCN4AP35499 RNU6-657P-201ENST00000383904 107 ntBASIC2.17□□□□□ -2.06
SCN4AP35499 RNU6-1122P-201ENST00000384449 107 ntBASIC2.17□□□□□ -2.06
SCN4AP35499 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SCN4AP35499 SSXP10-201ENST00000402595 565 ntBASIC2.17□□□□□ -2.06
SCN4AP35499 AL513331.1-201ENST00000411908 397 ntBASIC2.17□□□□□ -2.06
SCN4AP35499 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.17□□□□□ -2.06
SCN4AP35499 MTCO2P23-201ENST00000425216 680 ntBASIC2.17□□□□□ -2.06
SCN4AP35499 HIGD1AP11-201ENST00000438361 280 ntBASIC2.17□□□□□ -2.06
SCN4AP35499 MTCO2P25-201ENST00000447065 681 ntBASIC2.17□□□□□ -2.06
SCN4AP35499 DPPA3P1-201ENST00000448050 469 ntBASIC2.17□□□□□ -2.06
SCN4AP35499 EXOSC3P1-201ENST00000448649 500 ntBASIC2.17□□□□□ -2.06
SCN4AP35499 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.17□□□□□ -2.06
SCN4AP35499 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.17□□□□□ -2.06
SCN4AP35499 SEM1P1-201ENST00000506694 209 ntBASIC2.17□□□□□ -2.06
SCN4AP35499 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.17□□□□□ -2.06
SCN4AP35499 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.17□□□□□ -2.06
SCN4AP35499 AC121758.2-201ENST00000553271 193 ntBASIC2.17□□□□□ -2.06
SCN4AP35499 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC2.17□□□□□ -2.06
SCN4AP35499 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.17□□□□□ -2.06
SCN4AP35499 AL139022.2-201ENST00000606934 443 ntBASIC2.17□□□□□ -2.06
SCN4AP35499 AC097504.2-201ENST00000608088 454 ntBASIC2.17□□□□□ -2.06
SCN4AP35499 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SCN4AP35499 uc_338.5-201ENST00000611839 155 ntBASIC2.17□□□□□ -2.06
SCN4AP35499 MIR6895-201ENST00000613497 78 ntBASIC2.17□□□□□ -2.06
SCN4AP35499 AL121895.2-201ENST00000619558 447 ntBASIC2.17□□□□□ -2.06
SCN4AP35499 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SCN4AP35499 AL356473.1-201ENST00000406203 1408 ntBASIC2.16□□□□□ -2.06
SCN4AP35499 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.16□□□□□ -2.06
SCN4AP35499 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
SCN4AP35499 RNU6-335P-201ENST00000364563 113 ntBASIC2.16□□□□□ -2.06
SCN4AP35499 SNORA51.2-201ENST00000364595 132 ntBASIC2.16□□□□□ -2.06
SCN4AP35499 U3.29-201ENST00000391296 212 ntBASIC2.16□□□□□ -2.06
SCN4AP35499 BX682237.1-201ENST00000415016 335 ntBASIC2.16□□□□□ -2.06
SCN4AP35499 RPS3AP9-201ENST00000417027 792 ntBASIC2.16□□□□□ -2.06
SCN4AP35499 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.16□□□□□ -2.06
SCN4AP35499 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.16□□□□□ -2.06
SCN4AP35499 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.16□□□□□ -2.06
SCN4AP35499 MTCO1P53-201ENST00000441633 699 ntBASIC2.16□□□□□ -2.06
SCN4AP35499 ZNF736P4Y-201ENST00000454995 1243 ntBASIC2.16□□□□□ -2.06
SCN4AP35499 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SCN4AP35499 AC092436.3-201ENST00000511788 257 ntBASIC2.16□□□□□ -2.06
SCN4AP35499 MED28P6-201ENST00000558776 231 ntBASIC2.16□□□□□ -2.06
SCN4AP35499 RNU4-5P-201ENST00000607255 135 ntBASIC2.16□□□□□ -2.06
SCN4AP35499 AC109809.1-201ENST00000619665 545 ntBASIC2.16□□□□□ -2.06
SCN4AP35499 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.16□□□□□ -2.06
SCN4AP35499 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.15□□□□□ -2.06
SCN4AP35499 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
SCN4AP35499 RNU6-1078P-201ENST00000364522 103 ntBASIC2.15□□□□□ -2.06
SCN4AP35499 Y_RNA.493-201ENST00000384422 102 ntBASIC2.15□□□□□ -2.06
SCN4AP35499 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
SCN4AP35499 AL139098.1-201ENST00000407291 389 ntBASIC2.15□□□□□ -2.06
SCN4AP35499 AC096533.1-201ENST00000411645 353 ntBASIC2.15□□□□□ -2.06
SCN4AP35499 USP9YP6-201ENST00000413550 854 ntBASIC2.15□□□□□ -2.06
SCN4AP35499 AL161449.1-201ENST00000414531 1199 ntBASIC2.15□□□□□ -2.06
SCN4AP35499 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.15□□□□□ -2.06
SCN4AP35499 PSMA6P3-201ENST00000428242 164 ntBASIC2.15□□□□□ -2.06
SCN4AP35499 GTF2IP3-201ENST00000433887 494 ntBASIC2.15□□□□□ -2.06
SCN4AP35499 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
SCN4AP35499 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.15□□□□□ -2.06
SCN4AP35499 RABEPKP1-201ENST00000440529 1026 ntBASIC2.15□□□□□ -2.06
SCN4AP35499 OFD1P3Y-201ENST00000453312 783 ntBASIC2.15□□□□□ -2.06
SCN4AP35499 snoU109.4-201ENST00000458953 143 ntBASIC2.15□□□□□ -2.06
SCN4AP35499 RPL21P104-201ENST00000464143 478 ntBASIC2.15□□□□□ -2.06
SCN4AP35499 AC092757.1-201ENST00000467293 467 ntBASIC2.15□□□□□ -2.06
SCN4AP35499 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.15□□□□□ -2.06
SCN4AP35499 AC023632.1-201ENST00000518463 375 ntBASIC2.15□□□□□ -2.06
SCN4AP35499 COX6CP5-201ENST00000527162 228 ntBASIC2.15□□□□□ -2.06
SCN4AP35499 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.06
SCN4AP35499 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.15□□□□□ -2.06
SCN4AP35499 MTCYBP23-201ENST00000558717 1102 ntBASIC2.15□□□□□ -2.06
SCN4AP35499 AL031176.1-201ENST00000604554 466 ntBASIC2.15□□□□□ -2.06
SCN4AP35499 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
SCN4AP35499 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.15□□□□□ -2.06
SCN4AP35499 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.15□□□□□ -2.07
SCN4AP35499 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
SCN4AP35499 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SCN4AP35499 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
SCN4AP35499 SNORD65.1-201ENST00000390889 71 ntBASIC2.14□□□□□ -2.07
SCN4AP35499 AL356131.1-201ENST00000405826 414 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms