Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.99□□□□□ -2.09
RPA3P35244 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.99□□□□□ -2.09
RPA3P35244 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC1.99□□□□□ -2.09
RPA3P35244 AC021749.1-201ENST00000604322 607 ntBASIC1.99□□□□□ -2.09
RPA3P35244 AC069304.2-201ENST00000605154 435 ntBASIC1.99□□□□□ -2.09
RPA3P35244 AC006927.2-201ENST00000639256 389 ntBASIC1.99□□□□□ -2.09
RPA3P35244 CDR1-202ENST00000625883 1485 ntBASIC1.99□□□□□ -2.09
RPA3P35244 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
RPA3P35244 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
RPA3P35244 AC009487.4-201ENST00000624969 3585 ntBASIC1.99□□□□□ -2.09
RPA3P35244 AC004520.1-201ENST00000608362 1413 ntBASIC1.99□□□□□ -2.09
RPA3P35244 RNU6-920P-201ENST00000410926 92 ntBASIC1.98□□□□□ -2.09
RPA3P35244 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.98□□□□□ -2.09
RPA3P35244 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.98□□□□□ -2.09
RPA3P35244 MTND2P20-201ENST00000440805 661 ntBASIC1.98□□□□□ -2.09
RPA3P35244 SNORD121B-201ENST00000458838 81 ntBASIC1.98□□□□□ -2.09
RPA3P35244 RPS20P22-201ENST00000473700 357 ntBASIC1.98□□□□□ -2.09
RPA3P35244 AC008837.1-201ENST00000511513 412 ntBASIC1.98□□□□□ -2.09
RPA3P35244 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC1.98□□□□□ -2.09
RPA3P35244 RN7SKP31-201ENST00000516354 278 ntBASIC1.98□□□□□ -2.09
RPA3P35244 RNU6-714P-201ENST00000516963 103 ntBASIC1.98□□□□□ -2.09
RPA3P35244 BTF3P12-201ENST00000519620 469 ntBASIC1.98□□□□□ -2.09
RPA3P35244 NDUFS5P6-201ENST00000529136 295 ntBASIC1.98□□□□□ -2.09
RPA3P35244 AP003049.1-201ENST00000529418 457 ntBASIC1.98□□□□□ -2.09
RPA3P35244 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.98□□□□□ -2.09
RPA3P35244 ANP32BP3-201ENST00000559213 706 ntBASIC1.98□□□□□ -2.09
RPA3P35244 AL049838.1-201ENST00000563647 981 ntBASIC1.98□□□□□ -2.09
RPA3P35244 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.98□□□□□ -2.09
RPA3P35244 AP000403.1-201ENST00000603349 851 ntBASIC1.98□□□□□ -2.09
RPA3P35244 SNRPGP19-201ENST00000603826 189 ntBASIC1.98□□□□□ -2.09
RPA3P35244 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.98□□□□□ -2.09
RPA3P35244 AC025594.3-201ENST00000613068 790 ntBASIC1.98□□□□□ -2.09
RPA3P35244 Y_RNA.783-201ENST00000613546 102 ntBASIC1.98□□□□□ -2.09
RPA3P35244 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.98□□□□□ -2.09
RPA3P35244 AL356266.1-201ENST00000623311 483 ntBASIC1.98□□□□□ -2.09
RPA3P35244 AC109454.4-201ENST00000623411 649 ntBASIC1.98□□□□□ -2.09
RPA3P35244 AC110994.2-201ENST00000635481 492 ntBASIC1.98□□□□□ -2.09
RPA3P35244 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.97□□□□□ -2.09
RPA3P35244 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
RPA3P35244 RNU6-1078P-201ENST00000364522 103 ntBASIC1.97□□□□□ -2.09
RPA3P35244 RNU6-637P-201ENST00000384050 107 ntBASIC1.97□□□□□ -2.09
RPA3P35244 MIR524-201ENST00000385242 87 ntBASIC1.97□□□□□ -2.09
RPA3P35244 MIR888-201ENST00000401186 77 ntBASIC1.97□□□□□ -2.09
RPA3P35244 AL513331.1-201ENST00000411908 397 ntBASIC1.97□□□□□ -2.09
RPA3P35244 HMGB1P49-201ENST00000418882 569 ntBASIC1.97□□□□□ -2.09
RPA3P35244 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.97□□□□□ -2.09
RPA3P35244 ARF4P4-201ENST00000439608 520 ntBASIC1.97□□□□□ -2.09
RPA3P35244 MTCYBP42-201ENST00000444653 1130 ntBASIC1.97□□□□□ -2.09
RPA3P35244 OSTCP8-201ENST00000445117 448 ntBASIC1.97□□□□□ -2.09
RPA3P35244 AC011753.1-201ENST00000451001 220 ntBASIC1.97□□□□□ -2.09
RPA3P35244 BX322784.1-201ENST00000455793 1077 ntBASIC1.97□□□□□ -2.09
RPA3P35244 AC090515.1-201ENST00000465295 476 ntBASIC1.97□□□□□ -2.09
RPA3P35244 MRPL42P6-201ENST00000486397 371 ntBASIC1.97□□□□□ -2.09
RPA3P35244 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.97□□□□□ -2.09
RPA3P35244 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.97□□□□□ -2.09
RPA3P35244 AC022447.1-201ENST00000515358 464 ntBASIC1.97□□□□□ -2.09
RPA3P35244 SNORA31.6-201ENST00000516241 130 ntBASIC1.97□□□□□ -2.09
RPA3P35244 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.97□□□□□ -2.09
RPA3P35244 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC1.97□□□□□ -2.09
RPA3P35244 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.97□□□□□ -2.09
RPA3P35244 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.97□□□□□ -2.09
RPA3P35244 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
RPA3P35244 AC009127.3-201ENST00000570531 403 ntBASIC1.97□□□□□ -2.09
RPA3P35244 MIR3199-1-201ENST00000582434 88 ntBASIC1.97□□□□□ -2.09
RPA3P35244 RPS15AP11-201ENST00000594193 385 ntBASIC1.97□□□□□ -2.09
RPA3P35244 AC024257.5-201ENST00000612739 531 ntBASIC1.97□□□□□ -2.09
RPA3P35244 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.97□□□□□ -2.09
RPA3P35244 MIR4275-201ENST00000636486 87 ntBASIC1.97□□□□□ -2.09
RPA3P35244 AP005901.5-201ENST00000545779 1796 ntBASIC1.97□□□□□ -2.09
RPA3P35244 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
RPA3P35244 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.96□□□□□ -2.09
RPA3P35244 AC010329.5-201ENST00000623497 2174 ntBASIC1.96□□□□□ -2.1
RPA3P35244 AL138713.1-201ENST00000624026 2130 ntBASIC1.96□□□□□ -2.1
RPA3P35244 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.96□□□□□ -2.1
RPA3P35244 MIR218-1-201ENST00000384999 110 ntBASIC1.96□□□□□ -2.1
RPA3P35244 RNU6-952P-201ENST00000391164 108 ntBASIC1.96□□□□□ -2.1
RPA3P35244 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.96□□□□□ -2.1
RPA3P35244 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.96□□□□□ -2.1
RPA3P35244 HMGB1P9-201ENST00000429856 646 ntBASIC1.96□□□□□ -2.1
RPA3P35244 GTF2IP7-202ENST00000436677 309 ntBASIC1.96□□□□□ -2.1
RPA3P35244 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.96□□□□□ -2.1
RPA3P35244 MTATP6P7-201ENST00000453315 681 ntBASIC1.96□□□□□ -2.1
RPA3P35244 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.96□□□□□ -2.1
RPA3P35244 RNU7-136P-201ENST00000458819 69 ntBASIC1.96□□□□□ -2.1
RPA3P35244 AC097493.1-201ENST00000463958 372 ntBASIC1.96□□□□□ -2.1
RPA3P35244 DYNLL1P5-201ENST00000467158 270 ntBASIC1.96□□□□□ -2.1
RPA3P35244 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC1.96□□□□□ -2.1
RPA3P35244 MTAPP1-201ENST00000489154 819 ntBASIC1.96□□□□□ -2.1
RPA3P35244 RPS29P21-201ENST00000496272 170 ntBASIC1.96□□□□□ -2.1
RPA3P35244 AC008427.1-201ENST00000503102 655 ntBASIC1.96□□□□□ -2.1
RPA3P35244 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.96□□□□□ -2.1
RPA3P35244 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.96□□□□□ -2.1
RPA3P35244 RNU6-583P-201ENST00000516012 92 ntBASIC1.96□□□□□ -2.1
RPA3P35244 HSPE1P18-201ENST00000517602 280 ntBASIC1.96□□□□□ -2.1
RPA3P35244 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.96□□□□□ -2.1
RPA3P35244 AC087897.1-201ENST00000550134 156 ntBASIC1.96□□□□□ -2.1
RPA3P35244 AC023825.1-201ENST00000566704 1030 ntBASIC1.96□□□□□ -2.1
RPA3P35244 AC002545.1-201ENST00000592511 181 ntBASIC1.96□□□□□ -2.1
RPA3P35244 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.96□□□□□ -2.1
RPA3P35244 AC025588.2-201ENST00000604851 466 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms