Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 MTND5P29-201ENST00000458676 1807 ntBASIC3.38□□□□□ -1.87
HOXA13P31271 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
HOXA13P31271 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HOXA13P31271 Y_RNA.3-201ENST00000362331 103 ntBASIC3.38□□□□□ -1.87
HOXA13P31271 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
HOXA13P31271 Y_RNA.517-201ENST00000384551 106 ntBASIC3.38□□□□□ -1.87
HOXA13P31271 RNU6-1197P-201ENST00000391183 107 ntBASIC3.38□□□□□ -1.87
HOXA13P31271 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.38□□□□□ -1.87
HOXA13P31271 AC019097.1-201ENST00000424783 735 ntBASIC3.38□□□□□ -1.87
HOXA13P31271 AC104651.1-201ENST00000427559 735 ntBASIC3.38□□□□□ -1.87
HOXA13P31271 ARF4P2-201ENST00000430209 526 ntBASIC3.38□□□□□ -1.87
HOXA13P31271 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.38□□□□□ -1.87
HOXA13P31271 SNRPEP4-201ENST00000435815 279 ntBASIC3.38□□□□□ -1.87
HOXA13P31271 AC107083.1-201ENST00000439643 279 ntBASIC3.38□□□□□ -1.87
HOXA13P31271 AC005094.1-201ENST00000440420 368 ntBASIC3.38□□□□□ -1.87
HOXA13P31271 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.38□□□□□ -1.87
HOXA13P31271 MTND2P33-201ENST00000506452 1031 ntBASIC3.38□□□□□ -1.87
HOXA13P31271 SCGB1D5P-201ENST00000515134 247 ntBASIC3.38□□□□□ -1.87
HOXA13P31271 Y_RNA.672-201ENST00000516289 104 ntBASIC3.38□□□□□ -1.87
HOXA13P31271 AP003467.2-201ENST00000520175 319 ntBASIC3.38□□□□□ -1.87
HOXA13P31271 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.38□□□□□ -1.87
HOXA13P31271 AC124947.2-202ENST00000552735 133 ntBASIC3.38□□□□□ -1.87
HOXA13P31271 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.38□□□□□ -1.87
HOXA13P31271 MIR3186-201ENST00000577404 85 ntBASIC3.38□□□□□ -1.87
HOXA13P31271 AP000860.1-201ENST00000605250 559 ntBASIC3.38□□□□□ -1.87
HOXA13P31271 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.38□□□□□ -1.87
HOXA13P31271 SNHG22-203ENST00000617833 660 ntBASIC3.38□□□□□ -1.87
HOXA13P31271 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.38□□□□□ -1.87
HOXA13P31271 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
HOXA13P31271 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
HOXA13P31271 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.38□□□□□ -1.87
HOXA13P31271 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.38□□□□□ -1.87
HOXA13P31271 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
HOXA13P31271 TEX21P-201ENST00000447107 1476 ntBASIC3.37□□□□□ -1.87
HOXA13P31271 RNU4-91P-201ENST00000364778 135 ntBASIC3.37□□□□□ -1.87
HOXA13P31271 MIR634-201ENST00000385208 97 ntBASIC3.37□□□□□ -1.87
HOXA13P31271 RPS3AP3-201ENST00000411933 242 ntBASIC3.37□□□□□ -1.87
HOXA13P31271 AF274854.1-201ENST00000413236 615 ntBASIC3.37□□□□□ -1.87
HOXA13P31271 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.37□□□□□ -1.87
HOXA13P31271 AL589872.1-201ENST00000426602 288 ntBASIC3.37□□□□□ -1.87
HOXA13P31271 AC007919.1-201ENST00000429380 217 ntBASIC3.37□□□□□ -1.87
HOXA13P31271 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.37□□□□□ -1.87
HOXA13P31271 NDUFB4P6-201ENST00000436819 366 ntBASIC3.37□□□□□ -1.87
HOXA13P31271 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.37□□□□□ -1.87
HOXA13P31271 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.37□□□□□ -1.87
HOXA13P31271 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.37□□□□□ -1.87
HOXA13P31271 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.37□□□□□ -1.87
HOXA13P31271 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.37□□□□□ -1.87
HOXA13P31271 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.37□□□□□ -1.87
HOXA13P31271 AC012181.1-201ENST00000479895 423 ntBASIC3.37□□□□□ -1.87
HOXA13P31271 AC114967.1-201ENST00000504890 259 ntBASIC3.37□□□□□ -1.87
HOXA13P31271 AC010587.1-201ENST00000505809 469 ntBASIC3.37□□□□□ -1.87
HOXA13P31271 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.37□□□□□ -1.87
HOXA13P31271 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.37□□□□□ -1.87
HOXA13P31271 MIR5047-201ENST00000579212 100 ntBASIC3.37□□□□□ -1.87
HOXA13P31271 AC005771.1-201ENST00000585581 349 ntBASIC3.37□□□□□ -1.87
HOXA13P31271 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.37□□□□□ -1.87
HOXA13P31271 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.37□□□□□ -1.87
HOXA13P31271 AC006566.1-201ENST00000608943 513 ntBASIC3.37□□□□□ -1.87
HOXA13P31271 AC009570.1-201ENST00000609599 745 ntBASIC3.37□□□□□ -1.87
HOXA13P31271 AC004696.1-201ENST00000614345 607 ntBASIC3.37□□□□□ -1.87
HOXA13P31271 AC013476.2-201ENST00000614456 459 ntBASIC3.37□□□□□ -1.87
HOXA13P31271 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.37□□□□□ -1.87
HOXA13P31271 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HOXA13P31271 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
HOXA13P31271 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
HOXA13P31271 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HOXA13P31271 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.37□□□□□ -1.87
HOXA13P31271 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HOXA13P31271 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HOXA13P31271 RNA5SP383-201ENST00000362934 120 ntBASIC3.36□□□□□ -1.87
HOXA13P31271 U3.6-201ENST00000363622 211 ntBASIC3.36□□□□□ -1.87
HOXA13P31271 SNORA18.3-201ENST00000384122 132 ntBASIC3.36□□□□□ -1.87
HOXA13P31271 MIR325-201ENST00000385260 98 ntBASIC3.36□□□□□ -1.87
HOXA13P31271 RNU2-66P-201ENST00000410650 161 ntBASIC3.36□□□□□ -1.87
HOXA13P31271 RNU2-8P-201ENST00000410727 190 ntBASIC3.36□□□□□ -1.87
HOXA13P31271 BTF3L4P3-201ENST00000418879 476 ntBASIC3.36□□□□□ -1.87
HOXA13P31271 C8orf59P1-201ENST00000429930 303 ntBASIC3.36□□□□□ -1.87
HOXA13P31271 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.36□□□□□ -1.87
HOXA13P31271 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.36□□□□□ -1.87
HOXA13P31271 AL135938.1-201ENST00000443141 297 ntBASIC3.36□□□□□ -1.87
HOXA13P31271 AC009237.8-201ENST00000445492 379 ntBASIC3.36□□□□□ -1.87
HOXA13P31271 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.36□□□□□ -1.87
HOXA13P31271 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.36□□□□□ -1.87
HOXA13P31271 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.36□□□□□ -1.87
HOXA13P31271 AL359385.1-201ENST00000456509 365 ntBASIC3.36□□□□□ -1.87
HOXA13P31271 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.36□□□□□ -1.87
HOXA13P31271 RPS27AP1-201ENST00000475545 471 ntBASIC3.36□□□□□ -1.87
HOXA13P31271 ARL2BPP4-201ENST00000506854 471 ntBASIC3.36□□□□□ -1.87
HOXA13P31271 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HOXA13P31271 SCARNA15.2-201ENST00000516409 127 ntBASIC3.36□□□□□ -1.87
HOXA13P31271 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.36□□□□□ -1.87
HOXA13P31271 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HOXA13P31271 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HOXA13P31271 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.36□□□□□ -1.87
HOXA13P31271 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.36□□□□□ -1.87
HOXA13P31271 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.36□□□□□ -1.87
HOXA13P31271 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.36□□□□□ -1.87
HOXA13P31271 CYCSP39-201ENST00000565821 309 ntBASIC3.36□□□□□ -1.87
HOXA13P31271 MIR4474-201ENST00000579189 78 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms