Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.46□□□□□ -1.86
TM4SF1P30408 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.46□□□□□ -1.86
TM4SF1P30408 BX664608.1-201ENST00000610519 487 ntBASIC3.46□□□□□ -1.86
TM4SF1P30408 AC138749.5-201ENST00000611461 208 ntBASIC3.46□□□□□ -1.86
TM4SF1P30408 AL592295.2-201ENST00000612578 206 ntBASIC3.46□□□□□ -1.86
TM4SF1P30408 uc_338.12-201ENST00000616344 181 ntBASIC3.46□□□□□ -1.86
TM4SF1P30408 AC116165.2-201ENST00000616705 206 ntBASIC3.46□□□□□ -1.86
TM4SF1P30408 AC092608.2-201ENST00000624427 218 ntBASIC3.46□□□□□ -1.86
TM4SF1P30408 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
TM4SF1P30408 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.45□□□□□ -1.86
TM4SF1P30408 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.45□□□□□ -1.86
TM4SF1P30408 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
TM4SF1P30408 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TM4SF1P30408 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TM4SF1P30408 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
TM4SF1P30408 RNY3P13-201ENST00000365542 102 ntBASIC3.45□□□□□ -1.86
TM4SF1P30408 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.45□□□□□ -1.86
TM4SF1P30408 USP9YP13-201ENST00000417797 480 ntBASIC3.45□□□□□ -1.86
TM4SF1P30408 CYCSP46-201ENST00000423569 204 ntBASIC3.45□□□□□ -1.86
TM4SF1P30408 AC244035.1-201ENST00000430042 390 ntBASIC3.45□□□□□ -1.86
TM4SF1P30408 AL512844.2-201ENST00000433990 593 ntBASIC3.45□□□□□ -1.86
TM4SF1P30408 MTND1P12-201ENST00000455231 147 ntBASIC3.45□□□□□ -1.86
TM4SF1P30408 snoU109.1-201ENST00000459339 135 ntBASIC3.45□□□□□ -1.86
TM4SF1P30408 snoU13.15-201ENST00000459407 104 ntBASIC3.45□□□□□ -1.86
TM4SF1P30408 AC004801.2-202ENST00000463559 283 ntBASIC3.45□□□□□ -1.86
TM4SF1P30408 AP002884.2-201ENST00000471647 395 ntBASIC3.45□□□□□ -1.86
TM4SF1P30408 AC010631.1-201ENST00000474150 156 ntBASIC3.45□□□□□ -1.86
TM4SF1P30408 UBL5P3-201ENST00000475112 231 ntBASIC3.45□□□□□ -1.86
TM4SF1P30408 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.45□□□□□ -1.86
TM4SF1P30408 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.45□□□□□ -1.86
TM4SF1P30408 MTND5P13-201ENST00000513046 1079 ntBASIC3.45□□□□□ -1.86
TM4SF1P30408 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.45□□□□□ -1.86
TM4SF1P30408 AC096725.1-201ENST00000514266 313 ntBASIC3.45□□□□□ -1.86
TM4SF1P30408 HMGB1P14-201ENST00000557424 591 ntBASIC3.45□□□□□ -1.86
TM4SF1P30408 AC005951.2-201ENST00000576282 495 ntBASIC3.45□□□□□ -1.86
TM4SF1P30408 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.45□□□□□ -1.86
TM4SF1P30408 MIR3682-201ENST00000581338 84 ntBASIC3.45□□□□□ -1.86
TM4SF1P30408 MIR3609-201ENST00000582661 80 ntBASIC3.45□□□□□ -1.86
TM4SF1P30408 Z94722.1-201ENST00000604328 474 ntBASIC3.45□□□□□ -1.86
TM4SF1P30408 AC090132.2-201ENST00000615881 347 ntBASIC3.45□□□□□ -1.86
TM4SF1P30408 AL138880.2-201ENST00000616214 239 ntBASIC3.45□□□□□ -1.86
TM4SF1P30408 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.45□□□□□ -1.86
TM4SF1P30408 AC022079.1-201ENST00000621546 602 ntBASIC3.45□□□□□ -1.86
TM4SF1P30408 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.45□□□□□ -1.86
TM4SF1P30408 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.45□□□□□ -1.86
TM4SF1P30408 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.45□□□□□ -1.86
TM4SF1P30408 OR5H6-203ENST00000642105 978 ntBASIC3.45□□□□□ -1.86
TM4SF1P30408 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.45□□□□□ -1.86
TM4SF1P30408 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TM4SF1P30408 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
TM4SF1P30408 AC092593.1-201ENST00000515413 1815 ntBASIC3.44□□□□□ -1.86
TM4SF1P30408 AC007785.2-201ENST00000598627 1916 ntBASIC3.44□□□□□ -1.86
TM4SF1P30408 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.44□□□□□ -1.86
TM4SF1P30408 AC022336.2-201ENST00000568966 2538 ntBASIC3.44□□□□□ -1.86
TM4SF1P30408 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TM4SF1P30408 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.44□□□□□ -1.86
TM4SF1P30408 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TM4SF1P30408 FGF7P2-201ENST00000332473 296 ntBASIC3.44□□□□□ -1.86
TM4SF1P30408 RNU4-21P-201ENST00000362802 126 ntBASIC3.44□□□□□ -1.86
TM4SF1P30408 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.44□□□□□ -1.86
TM4SF1P30408 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.44□□□□□ -1.86
TM4SF1P30408 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.44□□□□□ -1.86
TM4SF1P30408 RPS15AP12-201ENST00000419498 388 ntBASIC3.44□□□□□ -1.86
TM4SF1P30408 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.44□□□□□ -1.86
TM4SF1P30408 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.44□□□□□ -1.86
TM4SF1P30408 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.44□□□□□ -1.86
TM4SF1P30408 HMGB1P27-201ENST00000431429 603 ntBASIC3.44□□□□□ -1.86
TM4SF1P30408 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.44□□□□□ -1.86
TM4SF1P30408 FDX1P2-201ENST00000450769 375 ntBASIC3.44□□□□□ -1.86
TM4SF1P30408 RNU6-420P-201ENST00000458780 107 ntBASIC3.44□□□□□ -1.86
TM4SF1P30408 RNA5SP269-201ENST00000459032 137 ntBASIC3.44□□□□□ -1.86
TM4SF1P30408 SNORD97-201ENST00000459187 142 ntBASIC3.44□□□□□ -1.86
TM4SF1P30408 snoU13.26-201ENST00000459452 105 ntBASIC3.44□□□□□ -1.86
TM4SF1P30408 RN7SL330P-201ENST00000469709 307 ntBASIC3.44□□□□□ -1.86
TM4SF1P30408 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.44□□□□□ -1.86
TM4SF1P30408 SNORA31.1-201ENST00000515993 133 ntBASIC3.44□□□□□ -1.86
TM4SF1P30408 SNORA31.5-201ENST00000516190 133 ntBASIC3.44□□□□□ -1.86
TM4SF1P30408 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.44□□□□□ -1.86
TM4SF1P30408 AP002453.2-201ENST00000533503 320 ntBASIC3.44□□□□□ -1.86
TM4SF1P30408 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.44□□□□□ -1.86
TM4SF1P30408 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
TM4SF1P30408 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.44□□□□□ -1.86
TM4SF1P30408 AC013553.2-201ENST00000604244 589 ntBASIC3.44□□□□□ -1.86
TM4SF1P30408 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.44□□□□□ -1.86
TM4SF1P30408 AC092140.2-201ENST00000618027 521 ntBASIC3.44□□□□□ -1.86
TM4SF1P30408 AL136313.1-201ENST00000624804 202 ntBASIC3.44□□□□□ -1.86
TM4SF1P30408 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.44□□□□□ -1.86
TM4SF1P30408 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
TM4SF1P30408 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
TM4SF1P30408 ZNF658B-202ENST00000615961 3375 ntBASIC3.43□□□□□ -1.86
TM4SF1P30408 RNU1-35P-201ENST00000362782 153 ntBASIC3.43□□□□□ -1.86
TM4SF1P30408 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
TM4SF1P30408 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TM4SF1P30408 AL359634.1-202ENST00000404721 284 ntBASIC3.43□□□□□ -1.86
TM4SF1P30408 RPS4XP7-201ENST00000406274 780 ntBASIC3.43□□□□□ -1.86
TM4SF1P30408 RNA5SP38-201ENST00000410750 119 ntBASIC3.43□□□□□ -1.86
TM4SF1P30408 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.43□□□□□ -1.86
TM4SF1P30408 AC007919.1-201ENST00000429380 217 ntBASIC3.43□□□□□ -1.86
TM4SF1P30408 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
TM4SF1P30408 TRIM60P18-201ENST00000441518 828 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms