Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.21□□□□□ -1.9
CDH1P12830 HSPD1P15-201ENST00000505573 1122 ntBASIC3.21□□□□□ -1.9
CDH1P12830 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.21□□□□□ -1.9
CDH1P12830 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.21□□□□□ -1.9
CDH1P12830 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.21□□□□□ -1.9
CDH1P12830 HMGN1P28-201ENST00000521340 364 ntBASIC3.21□□□□□ -1.9
CDH1P12830 AP004371.1-201ENST00000525240 214 ntBASIC3.21□□□□□ -1.9
CDH1P12830 AC109635.3-201ENST00000529536 185 ntBASIC3.21□□□□□ -1.9
CDH1P12830 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.21□□□□□ -1.9
CDH1P12830 AC123904.3-201ENST00000547218 814 ntBASIC3.21□□□□□ -1.9
CDH1P12830 AC128657.1-201ENST00000549459 145 ntBASIC3.21□□□□□ -1.9
CDH1P12830 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.21□□□□□ -1.9
CDH1P12830 OR4H12P-201ENST00000556269 907 ntBASIC3.21□□□□□ -1.9
CDH1P12830 AC068135.2-201ENST00000569293 1028 ntBASIC3.21□□□□□ -1.9
CDH1P12830 MIR4444-1-201ENST00000581696 74 ntBASIC3.21□□□□□ -1.9
CDH1P12830 MIR4444-2-201ENST00000584390 74 ntBASIC3.21□□□□□ -1.9
CDH1P12830 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.21□□□□□ -1.9
CDH1P12830 SNRPGP15-201ENST00000600149 222 ntBASIC3.21□□□□□ -1.9
CDH1P12830 AC093788.1-201ENST00000609356 927 ntBASIC3.21□□□□□ -1.9
CDH1P12830 AC004696.1-201ENST00000614345 607 ntBASIC3.21□□□□□ -1.9
CDH1P12830 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
CDH1P12830 AC015967.1-201ENST00000619893 476 ntBASIC3.21□□□□□ -1.9
CDH1P12830 AC005609.4-201ENST00000625071 447 ntBASIC3.21□□□□□ -1.9
CDH1P12830 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.21□□□□□ -1.9
CDH1P12830 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CDH1P12830 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CDH1P12830 ZNF680P1-201ENST00000436625 1469 ntBASIC3.21□□□□□ -1.9
CDH1P12830 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CDH1P12830 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.21□□□□□ -1.9
CDH1P12830 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CDH1P12830 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CDH1P12830 RNU1-70P-201ENST00000362618 164 ntBASIC3.2□□□□□ -1.9
CDH1P12830 RNU6-1322P-201ENST00000364309 107 ntBASIC3.2□□□□□ -1.9
CDH1P12830 RNU6-534P-201ENST00000364877 106 ntBASIC3.2□□□□□ -1.9
CDH1P12830 Y_RNA.381-201ENST00000365666 102 ntBASIC3.2□□□□□ -1.9
CDH1P12830 Y_RNA.390-201ENST00000383932 102 ntBASIC3.2□□□□□ -1.9
CDH1P12830 Y_RNA.481-201ENST00000384373 102 ntBASIC3.2□□□□□ -1.9
CDH1P12830 MIR558-201ENST00000384920 94 ntBASIC3.2□□□□□ -1.9
CDH1P12830 MIR183-201ENST00000384958 110 ntBASIC3.2□□□□□ -1.9
CDH1P12830 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.2□□□□□ -1.9
CDH1P12830 USP9YP27-201ENST00000418455 438 ntBASIC3.2□□□□□ -1.9
CDH1P12830 PPP1R11P2-201ENST00000423543 382 ntBASIC3.2□□□□□ -1.9
CDH1P12830 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.2□□□□□ -1.9
CDH1P12830 OR2AS1P-201ENST00000427827 319 ntBASIC3.2□□□□□ -1.9
CDH1P12830 AC079780.1-201ENST00000428259 207 ntBASIC3.2□□□□□ -1.9
CDH1P12830 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.2□□□□□ -1.9
CDH1P12830 AC004866.2-201ENST00000438285 481 ntBASIC3.2□□□□□ -1.9
CDH1P12830 RPL7P54-201ENST00000438336 674 ntBASIC3.2□□□□□ -1.9
CDH1P12830 GAPDHP27-201ENST00000447427 1020 ntBASIC3.2□□□□□ -1.9
CDH1P12830 WASF1P1-201ENST00000447560 1131 ntBASIC3.2□□□□□ -1.9
CDH1P12830 NFU1P2-201ENST00000448700 469 ntBASIC3.2□□□□□ -1.9
CDH1P12830 SNRPGP6-201ENST00000451124 220 ntBASIC3.2□□□□□ -1.9
CDH1P12830 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.2□□□□□ -1.9
CDH1P12830 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.2□□□□□ -1.9
CDH1P12830 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.2□□□□□ -1.9
CDH1P12830 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.2□□□□□ -1.9
CDH1P12830 AC069439.1-201ENST00000494739 167 ntBASIC3.2□□□□□ -1.9
CDH1P12830 AC005921.1-201ENST00000510589 286 ntBASIC3.2□□□□□ -1.9
CDH1P12830 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.2□□□□□ -1.9
CDH1P12830 RNU2-10P-201ENST00000516375 211 ntBASIC3.2□□□□□ -1.9
CDH1P12830 SNORA31.20-201ENST00000517111 133 ntBASIC3.2□□□□□ -1.9
CDH1P12830 AC245166.1-201ENST00000521012 253 ntBASIC3.2□□□□□ -1.9
CDH1P12830 AC100870.1-201ENST00000522035 505 ntBASIC3.2□□□□□ -1.9
CDH1P12830 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.2□□□□□ -1.9
CDH1P12830 FAM60DP-201ENST00000524174 632 ntBASIC3.2□□□□□ -1.9
CDH1P12830 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.2□□□□□ -1.9
CDH1P12830 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.2□□□□□ -1.9
CDH1P12830 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.2□□□□□ -1.9
CDH1P12830 AC011611.1-201ENST00000552179 197 ntBASIC3.2□□□□□ -1.9
CDH1P12830 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.2□□□□□ -1.9
CDH1P12830 RPL21P12-201ENST00000559810 515 ntBASIC3.2□□□□□ -1.9
CDH1P12830 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.2□□□□□ -1.9
CDH1P12830 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.2□□□□□ -1.9
CDH1P12830 AC008739.3-201ENST00000603262 127 ntBASIC3.2□□□□□ -1.9
CDH1P12830 AC007621.1-201ENST00000604544 437 ntBASIC3.2□□□□□ -1.9
CDH1P12830 AL022099.1-201ENST00000604551 712 ntBASIC3.2□□□□□ -1.9
CDH1P12830 AL121992.2-201ENST00000606262 256 ntBASIC3.2□□□□□ -1.9
CDH1P12830 AP002360.4-201ENST00000606980 481 ntBASIC3.2□□□□□ -1.9
CDH1P12830 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.2□□□□□ -1.9
CDH1P12830 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.2□□□□□ -1.9
CDH1P12830 AC002553.4-201ENST00000616896 331 ntBASIC3.2□□□□□ -1.9
CDH1P12830 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.2□□□□□ -1.9
CDH1P12830 AC244100.1-202ENST00000621554 382 ntBASIC3.2□□□□□ -1.9
CDH1P12830 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.2□□□□□ -1.9
CDH1P12830 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.2□□□□□ -1.9
CDH1P12830 MAPK10-362ENST00000641864 4484 ntBASIC3.2□□□□□ -1.9
CDH1P12830 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
CDH1P12830 DDX10P1-201ENST00000448545 1933 ntBASIC3.2□□□□□ -1.9
CDH1P12830 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.2□□□□□ -1.9
CDH1P12830 AL049781.1-201ENST00000623195 3585 ntBASIC3.2□□□□□ -1.9
CDH1P12830 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.2□□□□□ -1.9
CDH1P12830 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
CDH1P12830 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.2□□□□□ -1.9
CDH1P12830 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CDH1P12830 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.19□□□□□ -1.9
CDH1P12830 SNORA31-201ENST00000362607 130 ntBASIC3.19□□□□□ -1.9
CDH1P12830 RNA5SP295-201ENST00000362655 121 ntBASIC3.19□□□□□ -1.9
CDH1P12830 Y_RNA.88-201ENST00000363029 99 ntBASIC3.19□□□□□ -1.9
CDH1P12830 Y_RNA.89-201ENST00000363031 102 ntBASIC3.19□□□□□ -1.9
CDH1P12830 Y_RNA.367-201ENST00000365544 101 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms