Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 RNU6-976P-201ENST00000516086 111 ntBASIC4.28□□□□□ -1.72
COL6A2P12110 AC006064.5-201ENST00000541782 248 ntBASIC4.28□□□□□ -1.72
COL6A2P12110 AL355836.1-201ENST00000555951 870 ntBASIC4.28□□□□□ -1.72
COL6A2P12110 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC4.28□□□□□ -1.72
COL6A2P12110 AC012119.1-201ENST00000603184 222 ntBASIC4.28□□□□□ -1.72
COL6A2P12110 AP000654.2-201ENST00000605633 586 ntBASIC4.28□□□□□ -1.72
COL6A2P12110 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
COL6A2P12110 ATP5A1P2-202ENST00000616464 443 ntBASIC4.28□□□□□ -1.72
COL6A2P12110 AP005019.3-201ENST00000620418 560 ntBASIC4.28□□□□□ -1.72
COL6A2P12110 MIR4727-201ENST00000622232 55 ntBASIC4.28□□□□□ -1.72
COL6A2P12110 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
COL6A2P12110 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.28□□□□□ -1.72
COL6A2P12110 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
COL6A2P12110 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
COL6A2P12110 RNA5SP175-201ENST00000364275 119 ntBASIC4.27□□□□□ -1.73
COL6A2P12110 RNU6-629P-201ENST00000384061 103 ntBASIC4.27□□□□□ -1.73
COL6A2P12110 RPS4XP7-201ENST00000406274 780 ntBASIC4.27□□□□□ -1.73
COL6A2P12110 Y_RNA.646-201ENST00000410980 101 ntBASIC4.27□□□□□ -1.73
COL6A2P12110 AL513331.1-201ENST00000411908 397 ntBASIC4.27□□□□□ -1.73
COL6A2P12110 AC016397.1-201ENST00000412463 242 ntBASIC4.27□□□□□ -1.73
COL6A2P12110 RPL21P109-201ENST00000422213 475 ntBASIC4.27□□□□□ -1.73
COL6A2P12110 RPL7P37-201ENST00000425095 738 ntBASIC4.27□□□□□ -1.73
COL6A2P12110 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.27□□□□□ -1.73
COL6A2P12110 AC073063.1-201ENST00000434352 607 ntBASIC4.27□□□□□ -1.73
COL6A2P12110 AL359672.1-201ENST00000442302 409 ntBASIC4.27□□□□□ -1.73
COL6A2P12110 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.27□□□□□ -1.73
COL6A2P12110 DHFRP3-201ENST00000455595 559 ntBASIC4.27□□□□□ -1.73
COL6A2P12110 RPL12P20-201ENST00000475538 479 ntBASIC4.27□□□□□ -1.73
COL6A2P12110 AC006517.1-201ENST00000480485 328 ntBASIC4.27□□□□□ -1.73
COL6A2P12110 RPS26P15-201ENST00000488067 348 ntBASIC4.27□□□□□ -1.73
COL6A2P12110 AC097473.1-201ENST00000508142 408 ntBASIC4.27□□□□□ -1.73
COL6A2P12110 RNU6-914P-201ENST00000516749 109 ntBASIC4.27□□□□□ -1.73
COL6A2P12110 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.27□□□□□ -1.73
COL6A2P12110 RNU6-988P-201ENST00000519081 107 ntBASIC4.27□□□□□ -1.73
COL6A2P12110 RNU6-323P-201ENST00000521915 107 ntBASIC4.27□□□□□ -1.73
COL6A2P12110 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.27□□□□□ -1.73
COL6A2P12110 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.27□□□□□ -1.73
COL6A2P12110 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.27□□□□□ -1.73
COL6A2P12110 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.27□□□□□ -1.73
COL6A2P12110 MIR5692A1-201ENST00000580523 69 ntBASIC4.27□□□□□ -1.73
COL6A2P12110 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.27□□□□□ -1.73
COL6A2P12110 AC008737.2-201ENST00000599446 118 ntBASIC4.27□□□□□ -1.73
COL6A2P12110 AC025946.2-201ENST00000603398 234 ntBASIC4.27□□□□□ -1.73
COL6A2P12110 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.27□□□□□ -1.73
COL6A2P12110 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.27□□□□□ -1.73
COL6A2P12110 AL669831.3-213ENST00000636676 183 ntBASIC4.27□□□□□ -1.73
COL6A2P12110 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
COL6A2P12110 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
COL6A2P12110 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
COL6A2P12110 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
COL6A2P12110 KPNA2P1-201ENST00000458289 1591 ntBASIC4.27□□□□□ -1.73
COL6A2P12110 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL6A2P12110 AC008725.1-201ENST00000605123 2263 ntBASIC4.26□□□□□ -1.73
COL6A2P12110 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL6A2P12110 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.26□□□□□ -1.73
COL6A2P12110 AC004925.1-201ENST00000624256 2706 ntBASIC4.26□□□□□ -1.73
COL6A2P12110 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.26□□□□□ -1.73
COL6A2P12110 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
COL6A2P12110 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
COL6A2P12110 AC117470.1-201ENST00000381974 330 ntBASIC4.26□□□□□ -1.73
COL6A2P12110 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
COL6A2P12110 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
COL6A2P12110 SNORA11F-201ENST00000408237 128 ntBASIC4.26□□□□□ -1.73
COL6A2P12110 RNU4-25P-201ENST00000410569 230 ntBASIC4.26□□□□□ -1.73
COL6A2P12110 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.26□□□□□ -1.73
COL6A2P12110 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.26□□□□□ -1.73
COL6A2P12110 AC018865.2-201ENST00000423631 129 ntBASIC4.26□□□□□ -1.73
COL6A2P12110 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.26□□□□□ -1.73
COL6A2P12110 MTND3P2-201ENST00000438452 342 ntBASIC4.26□□□□□ -1.73
COL6A2P12110 AC104472.2-201ENST00000469035 601 ntBASIC4.26□□□□□ -1.73
COL6A2P12110 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.26□□□□□ -1.73
COL6A2P12110 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.26□□□□□ -1.73
COL6A2P12110 RNU6-1332P-201ENST00000516666 104 ntBASIC4.26□□□□□ -1.73
COL6A2P12110 AC026371.1-201ENST00000551867 419 ntBASIC4.26□□□□□ -1.73
COL6A2P12110 RPL23AP87-202ENST00000573039 466 ntBASIC4.26□□□□□ -1.73
COL6A2P12110 MIR4330-201ENST00000579077 105 ntBASIC4.26□□□□□ -1.73
COL6A2P12110 uc_338.32-201ENST00000615087 172 ntBASIC4.26□□□□□ -1.73
COL6A2P12110 MIR6128-201ENST00000615528 109 ntBASIC4.26□□□□□ -1.73
COL6A2P12110 RN7SL722P-201ENST00000617780 284 ntBASIC4.26□□□□□ -1.73
COL6A2P12110 RN7SL565P-201ENST00000618246 284 ntBASIC4.26□□□□□ -1.73
COL6A2P12110 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
COL6A2P12110 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.26□□□□□ -1.73
COL6A2P12110 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
COL6A2P12110 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL6A2P12110 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.25□□□□□ -1.73
COL6A2P12110 AC018555.1-201ENST00000567548 1980 ntBASIC4.25□□□□□ -1.73
COL6A2P12110 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.25□□□□□ -1.73
COL6A2P12110 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.25□□□□□ -1.73
COL6A2P12110 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
COL6A2P12110 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
COL6A2P12110 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL6A2P12110 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL6A2P12110 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL6A2P12110 AC007685.1-201ENST00000329806 452 ntBASIC4.25□□□□□ -1.73
COL6A2P12110 RNU6-1040P-201ENST00000383974 107 ntBASIC4.25□□□□□ -1.73
COL6A2P12110 RNU6-214P-201ENST00000384130 107 ntBASIC4.25□□□□□ -1.73
COL6A2P12110 HSPE1P8-201ENST00000406997 288 ntBASIC4.25□□□□□ -1.73
COL6A2P12110 RPL7AP25-201ENST00000423357 805 ntBASIC4.25□□□□□ -1.73
COL6A2P12110 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.25□□□□□ -1.73
COL6A2P12110 AL732292.1-201ENST00000426692 226 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms