Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 MIR4711-201ENST00000578274 70 ntBASIC1.28□□□□□ -2.2
TOP2AP11388 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.28□□□□□ -2.21
TOP2AP11388 AL356473.1-201ENST00000406203 1408 ntBASIC1.27□□□□□ -2.21
TOP2AP11388 AL589743.1-201ENST00000551932 2712 ntBASIC1.27□□□□□ -2.21
TOP2AP11388 SFR1P1-201ENST00000403720 688 ntBASIC1.27□□□□□ -2.21
TOP2AP11388 RNA5SP193-201ENST00000410353 107 ntBASIC1.27□□□□□ -2.21
TOP2AP11388 NUP35P2-201ENST00000416748 943 ntBASIC1.27□□□□□ -2.21
TOP2AP11388 AC244453.4-201ENST00000419150 388 ntBASIC1.27□□□□□ -2.21
TOP2AP11388 AC246680.2-201ENST00000422106 389 ntBASIC1.27□□□□□ -2.21
TOP2AP11388 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.27□□□□□ -2.21
TOP2AP11388 AC244035.1-201ENST00000430042 390 ntBASIC1.27□□□□□ -2.21
TOP2AP11388 AC234064.1-201ENST00000436312 247 ntBASIC1.27□□□□□ -2.21
TOP2AP11388 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.27□□□□□ -2.21
TOP2AP11388 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.27□□□□□ -2.21
TOP2AP11388 AC146507.1-201ENST00000468335 354 ntBASIC1.27□□□□□ -2.21
TOP2AP11388 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC1.27□□□□□ -2.21
TOP2AP11388 AC105914.1-201ENST00000511798 226 ntBASIC1.27□□□□□ -2.21
TOP2AP11388 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC1.27□□□□□ -2.21
TOP2AP11388 EIF4EP5-201ENST00000528228 640 ntBASIC1.27□□□□□ -2.21
TOP2AP11388 AC087465.1-201ENST00000560574 245 ntBASIC1.27□□□□□ -2.21
TOP2AP11388 MIR1273G-201ENST00000577677 100 ntBASIC1.27□□□□□ -2.21
TOP2AP11388 AL136363.1-201ENST00000605349 337 ntBASIC1.27□□□□□ -2.21
TOP2AP11388 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
TOP2AP11388 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
TOP2AP11388 AC244636.1-201ENST00000421152 228 ntBASIC1.26□□□□□ -2.21
TOP2AP11388 TRAPPC2P4-201ENST00000421750 331 ntBASIC1.26□□□□□ -2.21
TOP2AP11388 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.26□□□□□ -2.21
TOP2AP11388 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC1.26□□□□□ -2.21
TOP2AP11388 AL590095.2-201ENST00000604136 117 ntBASIC1.26□□□□□ -2.21
TOP2AP11388 AC106791.2-201ENST00000604680 391 ntBASIC1.26□□□□□ -2.21
TOP2AP11388 ICE2P2-201ENST00000483823 2787 ntBASIC1.26□□□□□ -2.21
TOP2AP11388 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
TOP2AP11388 AL356131.1-201ENST00000405826 414 ntBASIC1.25□□□□□ -2.21
TOP2AP11388 RN7SKP61-201ENST00000410642 295 ntBASIC1.25□□□□□ -2.21
TOP2AP11388 CR848007.2-201ENST00000424918 787 ntBASIC1.25□□□□□ -2.21
TOP2AP11388 AC092451.2-201ENST00000538746 658 ntBASIC1.25□□□□□ -2.21
TOP2AP11388 PRR13P7-201ENST00000605538 430 ntBASIC1.25□□□□□ -2.21
TOP2AP11388 RNA5SP499-201ENST00000363982 119 ntBASIC1.25□□□□□ -2.21
TOP2AP11388 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC1.25□□□□□ -2.21
TOP2AP11388 MIR4287-201ENST00000579398 78 ntBASIC1.25□□□□□ -2.21
TOP2AP11388 MIR6835-201ENST00000621552 64 ntBASIC1.25□□□□□ -2.21
TOP2AP11388 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.24□□□□□ -2.21
TOP2AP11388 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.24□□□□□ -2.21
TOP2AP11388 HAUS6P2-201ENST00000433254 2404 ntBASIC1.24□□□□□ -2.21
TOP2AP11388 SNORD114-23-201ENST00000363536 72 ntBASIC1.24□□□□□ -2.21
TOP2AP11388 AC012497.1-201ENST00000429392 575 ntBASIC1.24□□□□□ -2.21
TOP2AP11388 SUMO2P2-201ENST00000456482 255 ntBASIC1.24□□□□□ -2.21
TOP2AP11388 MTCO3P35-201ENST00000485582 781 ntBASIC1.24□□□□□ -2.21
TOP2AP11388 RNU6-964P-201ENST00000516524 69 ntBASIC1.24□□□□□ -2.21
TOP2AP11388 RNA5SP468-201ENST00000516782 93 ntBASIC1.24□□□□□ -2.21
TOP2AP11388 RNA5SP330-201ENST00000517096 96 ntBASIC1.24□□□□□ -2.21
TOP2AP11388 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
TOP2AP11388 RNU6-939P-201ENST00000384634 107 ntBASIC1.23□□□□□ -2.21
TOP2AP11388 RNU6-516P-201ENST00000411381 104 ntBASIC1.23□□□□□ -2.21
TOP2AP11388 AC013268.2-201ENST00000420753 337 ntBASIC1.23□□□□□ -2.21
TOP2AP11388 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC1.23□□□□□ -2.21
TOP2AP11388 RPL21P66-201ENST00000426566 466 ntBASIC1.23□□□□□ -2.21
TOP2AP11388 RNU7-26P-201ENST00000458980 63 ntBASIC1.23□□□□□ -2.21
TOP2AP11388 OR5H4P-201ENST00000510851 923 ntBASIC1.23□□□□□ -2.21
TOP2AP11388 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.23□□□□□ -2.21
TOP2AP11388 AC005034.5-201ENST00000604219 466 ntBASIC1.23□□□□□ -2.21
TOP2AP11388 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.23□□□□□ -2.21
TOP2AP11388 Y_RNA.115-201ENST00000363272 98 ntBASIC1.22□□□□□ -2.21
TOP2AP11388 RNA5SP457-201ENST00000363657 124 ntBASIC1.22□□□□□ -2.21
TOP2AP11388 Y_RNA.258-201ENST00000364613 105 ntBASIC1.22□□□□□ -2.21
TOP2AP11388 UBE2FP1-201ENST00000416536 447 ntBASIC1.22□□□□□ -2.21
TOP2AP11388 SFR1P2-201ENST00000421841 730 ntBASIC1.22□□□□□ -2.21
TOP2AP11388 AL353898.1-201ENST00000444055 238 ntBASIC1.22□□□□□ -2.21
TOP2AP11388 RPS20P20-201ENST00000460498 340 ntBASIC1.22□□□□□ -2.21
TOP2AP11388 NAP1L1P3-201ENST00000462291 880 ntBASIC1.22□□□□□ -2.21
TOP2AP11388 AC098862.1-201ENST00000504991 413 ntBASIC1.22□□□□□ -2.21
TOP2AP11388 AC008127.2-201ENST00000549925 1075 ntBASIC1.22□□□□□ -2.21
TOP2AP11388 AC090616.3-201ENST00000582184 217 ntBASIC1.22□□□□□ -2.21
TOP2AP11388 AC078899.2-201ENST00000595282 212 ntBASIC1.22□□□□□ -2.21
TOP2AP11388 AC096772.1-201ENST00000609146 564 ntBASIC1.22□□□□□ -2.21
TOP2AP11388 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC1.22□□□□□ -2.21
TOP2AP11388 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC1.21□□□□□ -2.21
TOP2AP11388 AC117454.1-201ENST00000491120 168 ntBASIC1.21□□□□□ -2.22
TOP2AP11388 RNU6-50P-201ENST00000362356 103 ntBASIC1.2□□□□□ -2.22
TOP2AP11388 RNU6-716P-201ENST00000365621 103 ntBASIC1.2□□□□□ -2.22
TOP2AP11388 RNU6-19P-201ENST00000384718 107 ntBASIC1.2□□□□□ -2.22
TOP2AP11388 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.2□□□□□ -2.22
TOP2AP11388 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.2□□□□□ -2.22
TOP2AP11388 Z80107.1-201ENST00000436830 412 ntBASIC1.2□□□□□ -2.22
TOP2AP11388 JTBP1-201ENST00000441314 247 ntBASIC1.2□□□□□ -2.22
TOP2AP11388 AL353718.1-201ENST00000451028 517 ntBASIC1.2□□□□□ -2.22
TOP2AP11388 OR6C72P-201ENST00000451403 892 ntBASIC1.2□□□□□ -2.22
TOP2AP11388 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.2□□□□□ -2.22
TOP2AP11388 AC110792.2-201ENST00000510278 224 ntBASIC1.2□□□□□ -2.22
TOP2AP11388 SNORA48.11-201ENST00000517015 89 ntBASIC1.2□□□□□ -2.22
TOP2AP11388 RRN3P3-201ENST00000549207 578 ntBASIC1.2□□□□□ -2.22
TOP2AP11388 ZNF33CP-201ENST00000432492 2030 ntBASIC1.2□□□□□ -2.22
TOP2AP11388 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC1.2□□□□□ -2.22
TOP2AP11388 OR4G2P-201ENST00000328113 903 ntBASIC1.2□□□□□ -2.22
TOP2AP11388 Y_RNA.178-201ENST00000363832 102 ntBASIC1.2□□□□□ -2.22
TOP2AP11388 RNU6ATAC31P-201ENST00000408513 126 ntBASIC1.2□□□□□ -2.22
TOP2AP11388 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.2□□□□□ -2.22
TOP2AP11388 HMGN1P33-201ENST00000432945 451 ntBASIC1.2□□□□□ -2.22
TOP2AP11388 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC1.2□□□□□ -2.22
TOP2AP11388 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms