Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AC114797.1-201ENST00000514003 728 ntBASIC1.91□□□□□ -2.1
CD28P10747 AC110760.3-202ENST00000515177 371 ntBASIC1.91□□□□□ -2.1
CD28P10747 RN7SKP40-201ENST00000517211 242 ntBASIC1.91□□□□□ -2.1
CD28P10747 RNA5SP291-201ENST00000517222 105 ntBASIC1.91□□□□□ -2.1
CD28P10747 RNU6-840P-201ENST00000517275 65 ntBASIC1.91□□□□□ -2.1
CD28P10747 AC022634.1-201ENST00000520765 532 ntBASIC1.91□□□□□ -2.1
CD28P10747 AC021269.2-201ENST00000532318 330 ntBASIC1.91□□□□□ -2.1
CD28P10747 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CD28P10747 AL359212.1-201ENST00000556608 614 ntBASIC1.91□□□□□ -2.1
CD28P10747 AP000787.2-201ENST00000604432 568 ntBASIC1.91□□□□□ -2.1
CD28P10747 AL139022.2-201ENST00000606934 443 ntBASIC1.91□□□□□ -2.1
CD28P10747 AC097478.2-201ENST00000610572 514 ntBASIC1.91□□□□□ -2.1
CD28P10747 SDR42E1P2-201ENST00000614861 481 ntBASIC1.91□□□□□ -2.1
CD28P10747 AC103798.2-201ENST00000624292 632 ntBASIC1.91□□□□□ -2.1
CD28P10747 AC099063.3-201ENST00000642066 185 ntBASIC1.91□□□□□ -2.1
CD28P10747 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC1.91□□□□□ -2.1
CD28P10747 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.91□□□□□ -2.1
CD28P10747 AC006020.1-201ENST00000420179 1854 ntBASIC1.9□□□□□ -2.1
CD28P10747 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CD28P10747 SNORA68.1-201ENST00000364537 132 ntBASIC1.9□□□□□ -2.11
CD28P10747 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CD28P10747 RNU6-432P-201ENST00000384196 109 ntBASIC1.9□□□□□ -2.11
CD28P10747 RNU6-906P-201ENST00000384700 70 ntBASIC1.9□□□□□ -2.11
CD28P10747 MIR627-201ENST00000384979 97 ntBASIC1.9□□□□□ -2.11
CD28P10747 MIR888-201ENST00000401186 77 ntBASIC1.9□□□□□ -2.11
CD28P10747 TXNP7-201ENST00000406296 293 ntBASIC1.9□□□□□ -2.11
CD28P10747 MTCO1P17-201ENST00000411522 491 ntBASIC1.9□□□□□ -2.11
CD28P10747 MTCO2P23-201ENST00000425216 680 ntBASIC1.9□□□□□ -2.11
CD28P10747 AC020550.1-201ENST00000447385 163 ntBASIC1.9□□□□□ -2.11
CD28P10747 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
CD28P10747 AC027673.1-201ENST00000456245 405 ntBASIC1.9□□□□□ -2.11
CD28P10747 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.9□□□□□ -2.11
CD28P10747 AC008481.1-201ENST00000463278 396 ntBASIC1.9□□□□□ -2.11
CD28P10747 RNU6-927P-201ENST00000516199 100 ntBASIC1.9□□□□□ -2.11
CD28P10747 AC105185.1-201ENST00000518705 535 ntBASIC1.9□□□□□ -2.11
CD28P10747 GLYCAM1-201ENST00000546596 285 ntBASIC1.9□□□□□ -2.11
CD28P10747 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.9□□□□□ -2.11
CD28P10747 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CD28P10747 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC1.9□□□□□ -2.11
CD28P10747 AC087465.1-201ENST00000560574 245 ntBASIC1.9□□□□□ -2.11
CD28P10747 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.9□□□□□ -2.11
CD28P10747 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.9□□□□□ -2.11
CD28P10747 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.9□□□□□ -2.11
CD28P10747 AL391001.1-201ENST00000602747 715 ntBASIC1.9□□□□□ -2.11
CD28P10747 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CD28P10747 RNU6-88P-201ENST00000606801 100 ntBASIC1.9□□□□□ -2.11
CD28P10747 AC239868.4-201ENST00000608318 671 ntBASIC1.9□□□□□ -2.11
CD28P10747 AC024560.3-201ENST00000608482 349 ntBASIC1.9□□□□□ -2.11
CD28P10747 AC046143.2-201ENST00000609789 160 ntBASIC1.9□□□□□ -2.11
CD28P10747 AL136981.2-201ENST00000617319 734 ntBASIC1.9□□□□□ -2.11
CD28P10747 AP000676.3-201ENST00000623299 569 ntBASIC1.9□□□□□ -2.11
CD28P10747 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.9□□□□□ -2.11
CD28P10747 PABPC1P9-201ENST00000426076 1612 ntBASIC1.9□□□□□ -2.11
CD28P10747 AL137003.2-201ENST00000606924 2538 ntBASIC1.9□□□□□ -2.11
CD28P10747 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
CD28P10747 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CD28P10747 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
CD28P10747 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CD28P10747 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CD28P10747 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC1.89□□□□□ -2.11
CD28P10747 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC1.89□□□□□ -2.11
CD28P10747 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC1.89□□□□□ -2.11
CD28P10747 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CD28P10747 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CD28P10747 RNA5SP393-201ENST00000363423 117 ntBASIC1.89□□□□□ -2.11
CD28P10747 RNU6-853P-201ENST00000364306 107 ntBASIC1.89□□□□□ -2.11
CD28P10747 RNU1-100P-201ENST00000365255 165 ntBASIC1.89□□□□□ -2.11
CD28P10747 SET-203ENST00000372688 801 ntTSL 2 BASIC1.89□□□□□ -2.11
CD28P10747 RNU6-140P-201ENST00000384566 108 ntBASIC1.89□□□□□ -2.11
CD28P10747 RNA5SP354-201ENST00000391247 136 ntBASIC1.89□□□□□ -2.11
CD28P10747 MIR1305-201ENST00000408300 86 ntBASIC1.89□□□□□ -2.11
CD28P10747 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.89□□□□□ -2.11
CD28P10747 RNA5SP425-201ENST00000410336 112 ntBASIC1.89□□□□□ -2.11
CD28P10747 AL358075.3-201ENST00000426289 226 ntBASIC1.89□□□□□ -2.11
CD28P10747 AL445669.1-201ENST00000426743 755 ntBASIC1.89□□□□□ -2.11
CD28P10747 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.89□□□□□ -2.11
CD28P10747 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.89□□□□□ -2.11
CD28P10747 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.89□□□□□ -2.11
CD28P10747 SDR42E1P3-201ENST00000438345 502 ntBASIC1.89□□□□□ -2.11
CD28P10747 AL353705.4-201ENST00000449661 238 ntBASIC1.89□□□□□ -2.11
CD28P10747 AL009048.1-201ENST00000450437 298 ntBASIC1.89□□□□□ -2.11
CD28P10747 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CD28P10747 AC013267.1-201ENST00000458227 267 ntBASIC1.89□□□□□ -2.11
CD28P10747 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.89□□□□□ -2.11
CD28P10747 MTND4LP3-201ENST00000468320 276 ntBASIC1.89□□□□□ -2.11
CD28P10747 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.89□□□□□ -2.11
CD28P10747 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.89□□□□□ -2.11
CD28P10747 SUMO2P6-201ENST00000505273 288 ntBASIC1.89□□□□□ -2.11
CD28P10747 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.89□□□□□ -2.11
CD28P10747 RNA5SP281-201ENST00000516504 135 ntBASIC1.89□□□□□ -2.11
CD28P10747 ZDHHC20P3-201ENST00000531576 336 ntBASIC1.89□□□□□ -2.11
CD28P10747 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.89□□□□□ -2.11
CD28P10747 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CD28P10747 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CD28P10747 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.89□□□□□ -2.11
CD28P10747 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.89□□□□□ -2.11
CD28P10747 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.89□□□□□ -2.11
CD28P10747 AL133153.1-201ENST00000557756 303 ntBASIC1.89□□□□□ -2.11
CD28P10747 MTND1P8-201ENST00000571424 950 ntBASIC1.89□□□□□ -2.11
CD28P10747 VN1R82P-201ENST00000601481 356 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms