Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 RNY4P14-201ENST00000363656 96 ntBASIC3.09□□□□□ -1.91
CD48P09326 RNU6-263P-201ENST00000363811 107 ntBASIC3.09□□□□□ -1.91
CD48P09326 RNU5A-8P-201ENST00000364102 114 ntBASIC3.09□□□□□ -1.91
CD48P09326 Y_RNA.372-201ENST00000365599 102 ntBASIC3.09□□□□□ -1.91
CD48P09326 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.09□□□□□ -1.91
CD48P09326 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.09□□□□□ -1.91
CD48P09326 BTF3P7-201ENST00000407097 488 ntBASIC3.09□□□□□ -1.91
CD48P09326 RNU4-55P-201ENST00000410731 137 ntBASIC3.09□□□□□ -1.91
CD48P09326 RNU2-62P-201ENST00000410868 191 ntBASIC3.09□□□□□ -1.91
CD48P09326 RNU4-78P-201ENST00000410940 126 ntBASIC3.09□□□□□ -1.91
CD48P09326 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.09□□□□□ -1.91
CD48P09326 BEND7P1-201ENST00000422058 457 ntBASIC3.09□□□□□ -1.91
CD48P09326 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CD48P09326 MTCO2P19-201ENST00000427513 598 ntBASIC3.09□□□□□ -1.91
CD48P09326 AC137499.1-201ENST00000427602 88 ntBASIC3.09□□□□□ -1.91
CD48P09326 AC073464.1-201ENST00000429823 534 ntBASIC3.09□□□□□ -1.91
CD48P09326 AC000111.3-201ENST00000433478 193 ntBASIC3.09□□□□□ -1.91
CD48P09326 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.09□□□□□ -1.91
CD48P09326 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CD48P09326 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.09□□□□□ -1.91
CD48P09326 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.09□□□□□ -1.91
CD48P09326 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.09□□□□□ -1.91
CD48P09326 MTCO3P38-201ENST00000468910 766 ntBASIC3.09□□□□□ -1.91
CD48P09326 AL121769.1-201ENST00000469473 401 ntBASIC3.09□□□□□ -1.91
CD48P09326 AC007182.2-201ENST00000489251 402 ntBASIC3.09□□□□□ -1.91
CD48P09326 AC023194.1-201ENST00000493084 308 ntBASIC3.09□□□□□ -1.91
CD48P09326 RPL7P23-201ENST00000493874 747 ntBASIC3.09□□□□□ -1.91
CD48P09326 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CD48P09326 AC009646.1-201ENST00000510455 318 ntBASIC3.09□□□□□ -1.91
CD48P09326 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.09□□□□□ -1.91
CD48P09326 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.09□□□□□ -1.91
CD48P09326 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.09□□□□□ -1.91
CD48P09326 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.09□□□□□ -1.91
CD48P09326 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.09□□□□□ -1.91
CD48P09326 MIR3200-201ENST00000580767 85 ntBASIC3.09□□□□□ -1.91
CD48P09326 AL031176.1-201ENST00000604554 466 ntBASIC3.09□□□□□ -1.91
CD48P09326 MIR98-201ENST00000606724 119 ntBASIC3.09□□□□□ -1.91
CD48P09326 AC090970.3-201ENST00000612566 866 ntBASIC3.09□□□□□ -1.91
CD48P09326 AC007014.2-201ENST00000615581 479 ntBASIC3.09□□□□□ -1.91
CD48P09326 AC005858.4-201ENST00000623191 700 ntBASIC3.09□□□□□ -1.91
CD48P09326 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
CD48P09326 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
CD48P09326 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.08□□□□□ -1.92
CD48P09326 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CD48P09326 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CD48P09326 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
CD48P09326 RNU6-1249P-201ENST00000363237 111 ntBASIC3.08□□□□□ -1.92
CD48P09326 RNU6-1078P-201ENST00000364522 103 ntBASIC3.08□□□□□ -1.92
CD48P09326 RNY4P16-201ENST00000364768 94 ntBASIC3.08□□□□□ -1.92
CD48P09326 RNU6-282P-201ENST00000365357 103 ntBASIC3.08□□□□□ -1.92
CD48P09326 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
CD48P09326 SNORA20.2-201ENST00000383922 131 ntBASIC3.08□□□□□ -1.92
CD48P09326 MIR634-201ENST00000385208 97 ntBASIC3.08□□□□□ -1.92
CD48P09326 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.08□□□□□ -1.92
CD48P09326 U3.42-201ENST00000408746 214 ntBASIC3.08□□□□□ -1.92
CD48P09326 RN7SKP58-201ENST00000411010 305 ntBASIC3.08□□□□□ -1.92
CD48P09326 AC099677.1-201ENST00000420575 175 ntBASIC3.08□□□□□ -1.92
CD48P09326 DUTP6-201ENST00000425573 462 ntBASIC3.08□□□□□ -1.92
CD48P09326 DPPA2P1-201ENST00000428060 556 ntBASIC3.08□□□□□ -1.92
CD48P09326 FCF1P1-201ENST00000432690 571 ntBASIC3.08□□□□□ -1.92
CD48P09326 AC119618.1-201ENST00000434191 222 ntBASIC3.08□□□□□ -1.92
CD48P09326 AC002486.1-201ENST00000435098 391 ntBASIC3.08□□□□□ -1.92
CD48P09326 RPL35AP22-201ENST00000436855 335 ntBASIC3.08□□□□□ -1.92
CD48P09326 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.08□□□□□ -1.92
CD48P09326 MTATP6P30-201ENST00000443540 664 ntBASIC3.08□□□□□ -1.92
CD48P09326 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.08□□□□□ -1.92
CD48P09326 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.08□□□□□ -1.92
CD48P09326 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.08□□□□□ -1.92
CD48P09326 AC108059.3-201ENST00000456388 214 ntBASIC3.08□□□□□ -1.92
CD48P09326 RNU7-59P-201ENST00000459101 61 ntBASIC3.08□□□□□ -1.92
CD48P09326 MTAPP1-201ENST00000489154 819 ntBASIC3.08□□□□□ -1.92
CD48P09326 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.08□□□□□ -1.92
CD48P09326 RNA5SP337-201ENST00000517007 109 ntBASIC3.08□□□□□ -1.92
CD48P09326 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.08□□□□□ -1.92
CD48P09326 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.08□□□□□ -1.92
CD48P09326 AC103783.1-201ENST00000520506 373 ntBASIC3.08□□□□□ -1.92
CD48P09326 AC022616.3-201ENST00000523940 148 ntBASIC3.08□□□□□ -1.92
CD48P09326 OR5AQ1P-201ENST00000527596 927 ntBASIC3.08□□□□□ -1.92
CD48P09326 AP000857.1-201ENST00000532151 543 ntBASIC3.08□□□□□ -1.92
CD48P09326 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CD48P09326 AC018630.1-201ENST00000541376 925 ntBASIC3.08□□□□□ -1.92
CD48P09326 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.08□□□□□ -1.92
CD48P09326 HMGB1P33-201ENST00000563485 527 ntBASIC3.08□□□□□ -1.92
CD48P09326 SNORA59B-202ENST00000578183 701 ntBASIC3.08□□□□□ -1.92
CD48P09326 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.08□□□□□ -1.92
CD48P09326 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.08□□□□□ -1.92
CD48P09326 AC012669.1-201ENST00000603209 283 ntBASIC3.08□□□□□ -1.92
CD48P09326 AL391646.1-201ENST00000603860 190 ntBASIC3.08□□□□□ -1.92
CD48P09326 AC007038.2-201ENST00000608095 740 ntBASIC3.08□□□□□ -1.92
CD48P09326 AC004908.2-201ENST00000609090 574 ntBASIC3.08□□□□□ -1.92
CD48P09326 AL590282.1-201ENST00000610379 1136 ntBASIC3.08□□□□□ -1.92
CD48P09326 AC093838.1-201ENST00000613014 469 ntBASIC3.08□□□□□ -1.92
CD48P09326 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.08□□□□□ -1.92
CD48P09326 AC112204.3-201ENST00000623822 332 ntBASIC3.08□□□□□ -1.92
CD48P09326 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.08□□□□□ -1.92
CD48P09326 LRRC77P-213ENST00000637727 880 ntBASIC3.08□□□□□ -1.92
CD48P09326 MTND5P1-201ENST00000445440 1375 ntBASIC3.08□□□□□ -1.92
CD48P09326 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CD48P09326 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CD48P09326 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms