Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.94□□□□□ -1.94
VIMP08670 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.94□□□□□ -1.94
VIMP08670 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.94□□□□□ -1.94
VIMP08670 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
VIMP08670 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.94□□□□□ -1.94
VIMP08670 RPL23AP78-201ENST00000599928 470 ntBASIC2.94□□□□□ -1.94
VIMP08670 AC090115.4-201ENST00000609970 188 ntBASIC2.94□□□□□ -1.94
VIMP08670 AC010338.1-201ENST00000621823 717 ntBASIC2.94□□□□□ -1.94
VIMP08670 AC068880.5-201ENST00000624331 290 ntBASIC2.94□□□□□ -1.94
VIMP08670 AC019226.2-201ENST00000625973 424 ntBASIC2.94□□□□□ -1.94
VIMP08670 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.94□□□□□ -1.94
VIMP08670 OR8B1P-202ENST00000641132 1178 ntBASIC2.94□□□□□ -1.94
VIMP08670 MTND4P4-201ENST00000439033 1366 ntBASIC2.94□□□□□ -1.94
VIMP08670 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.93□□□□□ -1.94
VIMP08670 MTND5P29-201ENST00000458676 1807 ntBASIC2.93□□□□□ -1.94
VIMP08670 AC008669.1-201ENST00000565823 2178 ntBASIC2.93□□□□□ -1.94
VIMP08670 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
VIMP08670 RNU6-512P-201ENST00000364438 103 ntBASIC2.93□□□□□ -1.94
VIMP08670 RNU6-14P-201ENST00000384630 106 ntBASIC2.93□□□□□ -1.94
VIMP08670 RAB9AP3-201ENST00000412737 573 ntBASIC2.93□□□□□ -1.94
VIMP08670 AC009414.1-201ENST00000427200 443 ntBASIC2.93□□□□□ -1.94
VIMP08670 AC104651.1-201ENST00000427559 735 ntBASIC2.93□□□□□ -1.94
VIMP08670 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.93□□□□□ -1.94
VIMP08670 HMGB1P27-201ENST00000431429 603 ntBASIC2.93□□□□□ -1.94
VIMP08670 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC2.93□□□□□ -1.94
VIMP08670 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.93□□□□□ -1.94
VIMP08670 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.93□□□□□ -1.94
VIMP08670 AC093156.1-201ENST00000440382 670 ntBASIC2.93□□□□□ -1.94
VIMP08670 MTND1P26-201ENST00000440488 538 ntBASIC2.93□□□□□ -1.94
VIMP08670 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.93□□□□□ -1.94
VIMP08670 NEFMP1-201ENST00000443423 1006 ntBASIC2.93□□□□□ -1.94
VIMP08670 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.93□□□□□ -1.94
VIMP08670 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC2.93□□□□□ -1.94
VIMP08670 RAB9AP1-201ENST00000449393 573 ntBASIC2.93□□□□□ -1.94
VIMP08670 SNORD97-201ENST00000459187 142 ntBASIC2.93□□□□□ -1.94
VIMP08670 MRPS17P3-201ENST00000465453 385 ntBASIC2.93□□□□□ -1.94
VIMP08670 AC090525.1-201ENST00000479116 478 ntBASIC2.93□□□□□ -1.94
VIMP08670 AC103975.1-201ENST00000482506 483 ntBASIC2.93□□□□□ -1.94
VIMP08670 SUMO2P6-201ENST00000505273 288 ntBASIC2.93□□□□□ -1.94
VIMP08670 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
VIMP08670 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
VIMP08670 AP003122.4-201ENST00000530980 758 ntBASIC2.93□□□□□ -1.94
VIMP08670 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.93□□□□□ -1.94
VIMP08670 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.93□□□□□ -1.94
VIMP08670 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.93□□□□□ -1.94
VIMP08670 AC106785.1-201ENST00000565935 262 ntBASIC2.93□□□□□ -1.94
VIMP08670 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.93□□□□□ -1.94
VIMP08670 HMGN1P30-201ENST00000589286 268 ntBASIC2.93□□□□□ -1.94
VIMP08670 AC008739.2-201ENST00000597006 317 ntBASIC2.93□□□□□ -1.94
VIMP08670 RNU6-87P-201ENST00000607561 108 ntBASIC2.93□□□□□ -1.94
VIMP08670 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.93□□□□□ -1.94
VIMP08670 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
VIMP08670 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.93□□□□□ -1.94
VIMP08670 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
VIMP08670 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
VIMP08670 SNORA25.6-201ENST00000364121 118 ntBASIC2.92□□□□□ -1.94
VIMP08670 MT-TH-201ENST00000387441 69 ntBASIC2.92□□□□□ -1.94
VIMP08670 RNA5SP354-201ENST00000391247 136 ntBASIC2.92□□□□□ -1.94
VIMP08670 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.92□□□□□ -1.94
VIMP08670 AF228730.1-201ENST00000397972 663 ntBASIC2.92□□□□□ -1.94
VIMP08670 MIR888-201ENST00000401186 77 ntBASIC2.92□□□□□ -1.94
VIMP08670 RNU2-25P-201ENST00000411041 191 ntBASIC2.92□□□□□ -1.94
VIMP08670 AC093106.2-201ENST00000428212 385 ntBASIC2.92□□□□□ -1.94
VIMP08670 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.92□□□□□ -1.94
VIMP08670 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.92□□□□□ -1.94
VIMP08670 WASF1P1-201ENST00000447560 1131 ntBASIC2.92□□□□□ -1.94
VIMP08670 AC027673.1-201ENST00000456245 405 ntBASIC2.92□□□□□ -1.94
VIMP08670 RPL26P9-201ENST00000457466 433 ntBASIC2.92□□□□□ -1.94
VIMP08670 RPL37P6-201ENST00000460682 294 ntBASIC2.92□□□□□ -1.94
VIMP08670 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
VIMP08670 MTND3P7-201ENST00000474435 343 ntBASIC2.92□□□□□ -1.94
VIMP08670 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.92□□□□□ -1.94
VIMP08670 AC114786.4-201ENST00000508771 728 ntBASIC2.92□□□□□ -1.94
VIMP08670 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.92□□□□□ -1.94
VIMP08670 FABP5P5-201ENST00000515537 406 ntBASIC2.92□□□□□ -1.94
VIMP08670 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.92□□□□□ -1.94
VIMP08670 HMGB1P41-201ENST00000520234 440 ntBASIC2.92□□□□□ -1.94
VIMP08670 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.92□□□□□ -1.94
VIMP08670 RPS3AP4-201ENST00000555161 764 ntBASIC2.92□□□□□ -1.94
VIMP08670 NCAPGP2-201ENST00000557911 754 ntBASIC2.92□□□□□ -1.94
VIMP08670 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC2.92□□□□□ -1.94
VIMP08670 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.92□□□□□ -1.94
VIMP08670 AF131215.7-201ENST00000602443 707 ntBASIC2.92□□□□□ -1.94
VIMP08670 AL670379.6-201ENST00000603753 252 ntBASIC2.92□□□□□ -1.94
VIMP08670 AL670379.11-201ENST00000604059 253 ntBASIC2.92□□□□□ -1.94
VIMP08670 AC008162.1-201ENST00000604718 254 ntBASIC2.92□□□□□ -1.94
VIMP08670 AC007363.1-201ENST00000604736 620 ntBASIC2.92□□□□□ -1.94
VIMP08670 AL670379.1-201ENST00000604752 252 ntBASIC2.92□□□□□ -1.94
VIMP08670 AL670379.5-201ENST00000605253 252 ntBASIC2.92□□□□□ -1.94
VIMP08670 AL670379.12-201ENST00000605291 253 ntBASIC2.92□□□□□ -1.94
VIMP08670 AL670379.8-201ENST00000605353 252 ntBASIC2.92□□□□□ -1.94
VIMP08670 AL670379.7-201ENST00000605823 252 ntBASIC2.92□□□□□ -1.94
VIMP08670 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.92□□□□□ -1.94
VIMP08670 AL161734.1-201ENST00000609720 557 ntBASIC2.92□□□□□ -1.94
VIMP08670 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.92□□□□□ -1.94
VIMP08670 AP003399.1-201ENST00000637534 361 ntBASIC2.92□□□□□ -1.94
VIMP08670 AC099654.13-201ENST00000639774 207 ntBASIC2.92□□□□□ -1.94
VIMP08670 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2.92□□□□□ -1.94
VIMP08670 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
VIMP08670 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms