Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.41□□□□□ -2.02
CLDN9O95484 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.41□□□□□ -2.02
CLDN9O95484 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.41□□□□□ -2.02
CLDN9O95484 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.41□□□□□ -2.02
CLDN9O95484 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.41□□□□□ -2.02
CLDN9O95484 AC133134.1-201ENST00000466800 359 ntBASIC2.41□□□□□ -2.02
CLDN9O95484 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.41□□□□□ -2.02
CLDN9O95484 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.41□□□□□ -2.02
CLDN9O95484 RPS27P27-201ENST00000498779 255 ntBASIC2.41□□□□□ -2.02
CLDN9O95484 AC104090.1-201ENST00000506341 1171 ntBASIC2.41□□□□□ -2.02
CLDN9O95484 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
CLDN9O95484 MTND5P13-201ENST00000513046 1079 ntBASIC2.41□□□□□ -2.02
CLDN9O95484 MTATP6P9-201ENST00000515039 680 ntBASIC2.41□□□□□ -2.02
CLDN9O95484 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.41□□□□□ -2.02
CLDN9O95484 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.41□□□□□ -2.02
CLDN9O95484 SNORA31.15-201ENST00000516771 132 ntBASIC2.41□□□□□ -2.02
CLDN9O95484 COX6CP5-201ENST00000527162 228 ntBASIC2.41□□□□□ -2.02
CLDN9O95484 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.41□□□□□ -2.02
CLDN9O95484 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.41□□□□□ -2.02
CLDN9O95484 AC021171.1-201ENST00000603137 706 ntBASIC2.41□□□□□ -2.02
CLDN9O95484 AL592221.1-201ENST00000605266 382 ntBASIC2.41□□□□□ -2.02
CLDN9O95484 RNU6-88P-201ENST00000606801 100 ntBASIC2.41□□□□□ -2.02
CLDN9O95484 AC004908.2-201ENST00000609090 574 ntBASIC2.41□□□□□ -2.02
CLDN9O95484 SNHG22-203ENST00000617833 660 ntBASIC2.41□□□□□ -2.02
CLDN9O95484 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.41□□□□□ -2.02
CLDN9O95484 AL109620.1-201ENST00000618738 1197 ntBASIC2.41□□□□□ -2.02
CLDN9O95484 AP000676.3-201ENST00000623299 569 ntBASIC2.41□□□□□ -2.02
CLDN9O95484 FO624990.1-201ENST00000636373 85 ntBASIC2.41□□□□□ -2.02
CLDN9O95484 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
CLDN9O95484 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.4□□□□□ -2.02
CLDN9O95484 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.4□□□□□ -2.02
CLDN9O95484 AL136360.1-201ENST00000503377 1900 ntBASIC2.4□□□□□ -2.02
CLDN9O95484 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.02
CLDN9O95484 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CLDN9O95484 SNORA68.1-201ENST00000364537 132 ntBASIC2.4□□□□□ -2.03
CLDN9O95484 AL513475.1-201ENST00000406602 315 ntBASIC2.4□□□□□ -2.03
CLDN9O95484 RNU6-757P-201ENST00000410334 100 ntBASIC2.4□□□□□ -2.03
CLDN9O95484 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.4□□□□□ -2.03
CLDN9O95484 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.4□□□□□ -2.03
CLDN9O95484 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.4□□□□□ -2.03
CLDN9O95484 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.4□□□□□ -2.03
CLDN9O95484 AC098826.1-201ENST00000433943 471 ntBASIC2.4□□□□□ -2.03
CLDN9O95484 Z80107.1-201ENST00000436830 412 ntBASIC2.4□□□□□ -2.03
CLDN9O95484 MTATP6P30-201ENST00000443540 664 ntBASIC2.4□□□□□ -2.03
CLDN9O95484 ELOCP30-201ENST00000447108 299 ntBASIC2.4□□□□□ -2.03
CLDN9O95484 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.4□□□□□ -2.03
CLDN9O95484 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
CLDN9O95484 AC010631.1-201ENST00000474150 156 ntBASIC2.4□□□□□ -2.03
CLDN9O95484 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.4□□□□□ -2.03
CLDN9O95484 YWHAEP4-201ENST00000505390 198 ntBASIC2.4□□□□□ -2.03
CLDN9O95484 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
CLDN9O95484 RPPH1-2P-201ENST00000516688 293 ntBASIC2.4□□□□□ -2.03
CLDN9O95484 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
CLDN9O95484 VN1R82P-201ENST00000601481 356 ntBASIC2.4□□□□□ -2.03
CLDN9O95484 AL391001.1-201ENST00000602747 715 ntBASIC2.4□□□□□ -2.03
CLDN9O95484 DPPA3P3-201ENST00000603842 430 ntBASIC2.4□□□□□ -2.03
CLDN9O95484 AC239868.4-201ENST00000608318 671 ntBASIC2.4□□□□□ -2.03
CLDN9O95484 AC013470.4-201ENST00000619978 986 ntBASIC2.4□□□□□ -2.03
CLDN9O95484 AC068057.2-201ENST00000624047 895 ntBASIC2.4□□□□□ -2.03
CLDN9O95484 AL356596.1-201ENST00000624230 379 ntBASIC2.4□□□□□ -2.03
CLDN9O95484 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.4□□□□□ -2.03
CLDN9O95484 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.4□□□□□ -2.03
CLDN9O95484 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.4□□□□□ -2.03
CLDN9O95484 MIR7515-201ENST00000637837 67 ntBASIC2.4□□□□□ -2.03
CLDN9O95484 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.4□□□□□ -2.03
CLDN9O95484 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CLDN9O95484 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.4□□□□□ -2.03
CLDN9O95484 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CLDN9O95484 Y_RNA.245-201ENST00000364493 95 ntBASIC2.39□□□□□ -2.03
CLDN9O95484 U8.8-201ENST00000365399 135 ntBASIC2.39□□□□□ -2.03
CLDN9O95484 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
CLDN9O95484 SNORA41-201ENST00000384675 132 ntBASIC2.39□□□□□ -2.03
CLDN9O95484 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
CLDN9O95484 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.39□□□□□ -2.03
CLDN9O95484 CCNG1P1-201ENST00000406783 885 ntBASIC2.39□□□□□ -2.03
CLDN9O95484 AC023141.4-201ENST00000412031 328 ntBASIC2.39□□□□□ -2.03
CLDN9O95484 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.39□□□□□ -2.03
CLDN9O95484 USP12PX-201ENST00000432383 1057 ntBASIC2.39□□□□□ -2.03
CLDN9O95484 SNRPEP9-201ENST00000436794 238 ntBASIC2.39□□□□□ -2.03
CLDN9O95484 FAM103A2P-201ENST00000444122 354 ntBASIC2.39□□□□□ -2.03
CLDN9O95484 AC104389.3-201ENST00000445629 235 ntBASIC2.39□□□□□ -2.03
CLDN9O95484 AC020550.1-201ENST00000447385 163 ntBASIC2.39□□□□□ -2.03
CLDN9O95484 RPL23AP35-201ENST00000451906 501 ntBASIC2.39□□□□□ -2.03
CLDN9O95484 AC027673.1-201ENST00000456245 405 ntBASIC2.39□□□□□ -2.03
CLDN9O95484 RPL23AP45-201ENST00000476406 468 ntBASIC2.39□□□□□ -2.03
CLDN9O95484 AC126389.1-201ENST00000477436 290 ntBASIC2.39□□□□□ -2.03
CLDN9O95484 AC106872.3-201ENST00000495104 446 ntBASIC2.39□□□□□ -2.03
CLDN9O95484 EIF4EP3-201ENST00000498782 656 ntBASIC2.39□□□□□ -2.03
CLDN9O95484 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.39□□□□□ -2.03
CLDN9O95484 AC119751.4-201ENST00000507498 357 ntBASIC2.39□□□□□ -2.03
CLDN9O95484 LTV1P1-201ENST00000510683 1237 ntBASIC2.39□□□□□ -2.03
CLDN9O95484 RN7SKP24-201ENST00000515888 284 ntBASIC2.39□□□□□ -2.03
CLDN9O95484 SCARNA17.1-201ENST00000516211 143 ntBASIC2.39□□□□□ -2.03
CLDN9O95484 SCARNA17.2-201ENST00000516334 143 ntBASIC2.39□□□□□ -2.03
CLDN9O95484 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.39□□□□□ -2.03
CLDN9O95484 AC007115.1-201ENST00000546853 234 ntBASIC2.39□□□□□ -2.03
CLDN9O95484 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.39□□□□□ -2.03
CLDN9O95484 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.39□□□□□ -2.03
CLDN9O95484 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.39□□□□□ -2.03
CLDN9O95484 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms