Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.85□□□□□ -1.63
RAPGEF3O95398 AC114797.1-201ENST00000514003 728 ntBASIC4.85□□□□□ -1.63
RAPGEF3O95398 SNORA40.12-201ENST00000516329 111 ntBASIC4.85□□□□□ -1.63
RAPGEF3O95398 RNA5SP367-201ENST00000516557 118 ntBASIC4.85□□□□□ -1.63
RAPGEF3O95398 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.85□□□□□ -1.63
RAPGEF3O95398 AC100870.1-201ENST00000522035 505 ntBASIC4.85□□□□□ -1.63
RAPGEF3O95398 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.85□□□□□ -1.63
RAPGEF3O95398 OR4K8P-201ENST00000578842 1048 ntBASIC4.85□□□□□ -1.63
RAPGEF3O95398 AC090616.5-202ENST00000582111 297 ntBASIC4.85□□□□□ -1.63
RAPGEF3O95398 ELOCP29-201ENST00000588193 334 ntBASIC4.85□□□□□ -1.63
RAPGEF3O95398 AC092794.2-201ENST00000620933 563 ntBASIC4.85□□□□□ -1.63
RAPGEF3O95398 AP003122.6-201ENST00000623831 495 ntBASIC4.85□□□□□ -1.63
RAPGEF3O95398 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
RAPGEF3O95398 DDX10P1-201ENST00000448545 1933 ntBASIC4.85□□□□□ -1.63
RAPGEF3O95398 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.85□□□□□ -1.63
RAPGEF3O95398 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.85□□□□□ -1.63
RAPGEF3O95398 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.85□□□□□ -1.63
RAPGEF3O95398 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RAPGEF3O95398 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RAPGEF3O95398 AL672296.1-201ENST00000427780 2158 ntBASIC4.84□□□□□ -1.63
RAPGEF3O95398 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.84□□□□□ -1.63
RAPGEF3O95398 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
RAPGEF3O95398 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RAPGEF3O95398 RPS3AP24-201ENST00000407896 734 ntBASIC4.84□□□□□ -1.63
RAPGEF3O95398 RNA5SP107-201ENST00000411358 122 ntBASIC4.84□□□□□ -1.63
RAPGEF3O95398 NUP35P1-201ENST00000422734 947 ntBASIC4.84□□□□□ -1.63
RAPGEF3O95398 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.84□□□□□ -1.63
RAPGEF3O95398 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.84□□□□□ -1.63
RAPGEF3O95398 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.84□□□□□ -1.63
RAPGEF3O95398 AL109933.2-201ENST00000452651 260 ntBASIC4.84□□□□□ -1.63
RAPGEF3O95398 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.84□□□□□ -1.63
RAPGEF3O95398 SNORD27.1-201ENST00000516319 72 ntBASIC4.84□□□□□ -1.63
RAPGEF3O95398 RNU6-64P-201ENST00000517119 105 ntBASIC4.84□□□□□ -1.63
RAPGEF3O95398 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.84□□□□□ -1.63
RAPGEF3O95398 OR5BN1P-201ENST00000532955 829 ntBASIC4.84□□□□□ -1.63
RAPGEF3O95398 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.84□□□□□ -1.63
RAPGEF3O95398 AC060780.3-201ENST00000589464 80 ntBASIC4.84□□□□□ -1.63
RAPGEF3O95398 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RAPGEF3O95398 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.84□□□□□ -1.63
RAPGEF3O95398 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
RAPGEF3O95398 MIR4275-201ENST00000636486 87 ntBASIC4.84□□□□□ -1.63
RAPGEF3O95398 FAM35BP-202ENST00000497389 3337 ntBASIC4.83□□□□□ -1.64
RAPGEF3O95398 CASC19-280ENST00000642102 1351 ntBASIC4.83□□□□□ -1.64
RAPGEF3O95398 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RAPGEF3O95398 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
RAPGEF3O95398 RNY3P3-201ENST00000363816 102 ntBASIC4.83□□□□□ -1.64
RAPGEF3O95398 SNORA71.1-201ENST00000364523 117 ntBASIC4.83□□□□□ -1.64
RAPGEF3O95398 RNU6-39P-201ENST00000384344 107 ntBASIC4.83□□□□□ -1.64
RAPGEF3O95398 MIR135A2-201ENST00000384854 100 ntBASIC4.83□□□□□ -1.64
RAPGEF3O95398 MIR1-2-201ENST00000384961 85 ntBASIC4.83□□□□□ -1.64
RAPGEF3O95398 RNU6-1158P-201ENST00000391167 107 ntBASIC4.83□□□□□ -1.64
RAPGEF3O95398 LAP3P1-201ENST00000403648 294 ntBASIC4.83□□□□□ -1.64
RAPGEF3O95398 RNA5SP118-201ENST00000410385 109 ntBASIC4.83□□□□□ -1.64
RAPGEF3O95398 OR51A5P-201ENST00000415429 942 ntBASIC4.83□□□□□ -1.64
RAPGEF3O95398 RPL21P109-201ENST00000422213 475 ntBASIC4.83□□□□□ -1.64
RAPGEF3O95398 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.83□□□□□ -1.64
RAPGEF3O95398 OR2AS1P-201ENST00000427827 319 ntBASIC4.83□□□□□ -1.64
RAPGEF3O95398 AL606489.2-201ENST00000433886 234 ntBASIC4.83□□□□□ -1.64
RAPGEF3O95398 BNIP3P2-201ENST00000441221 577 ntBASIC4.83□□□□□ -1.64
RAPGEF3O95398 AC016691.1-201ENST00000441321 413 ntBASIC4.83□□□□□ -1.64
RAPGEF3O95398 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.83□□□□□ -1.64
RAPGEF3O95398 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.83□□□□□ -1.64
RAPGEF3O95398 HMGB3P30-201ENST00000457863 606 ntBASIC4.83□□□□□ -1.64
RAPGEF3O95398 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.83□□□□□ -1.64
RAPGEF3O95398 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RAPGEF3O95398 AC117522.1-201ENST00000509821 380 ntBASIC4.83□□□□□ -1.64
RAPGEF3O95398 RNU6-835P-201ENST00000516974 104 ntBASIC4.83□□□□□ -1.64
RAPGEF3O95398 AC126177.3-201ENST00000551839 688 ntBASIC4.83□□□□□ -1.64
RAPGEF3O95398 AL360157.1-201ENST00000565962 87 ntBASIC4.83□□□□□ -1.64
RAPGEF3O95398 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.83□□□□□ -1.64
RAPGEF3O95398 YWHAEP7-203ENST00000622054 312 ntBASIC4.83□□□□□ -1.64
RAPGEF3O95398 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.83□□□□□ -1.64
RAPGEF3O95398 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
RAPGEF3O95398 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RAPGEF3O95398 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
RAPGEF3O95398 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RAPGEF3O95398 Y_RNA.38-201ENST00000362617 102 ntBASIC4.82□□□□□ -1.64
RAPGEF3O95398 RNU4-48P-201ENST00000365559 182 ntBASIC4.82□□□□□ -1.64
RAPGEF3O95398 RNU2-9P-201ENST00000410194 145 ntBASIC4.82□□□□□ -1.64
RAPGEF3O95398 AL160275.2-201ENST00000412010 394 ntBASIC4.82□□□□□ -1.64
RAPGEF3O95398 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.82□□□□□ -1.64
RAPGEF3O95398 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC4.82□□□□□ -1.64
RAPGEF3O95398 RPL36AP6-201ENST00000435770 321 ntBASIC4.82□□□□□ -1.64
RAPGEF3O95398 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.82□□□□□ -1.64
RAPGEF3O95398 AC105272.1-201ENST00000438604 198 ntBASIC4.82□□□□□ -1.64
RAPGEF3O95398 RPS15AP9-201ENST00000439856 381 ntBASIC4.82□□□□□ -1.64
RAPGEF3O95398 TXNP1-201ENST00000441872 371 ntBASIC4.82□□□□□ -1.64
RAPGEF3O95398 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC4.82□□□□□ -1.64
RAPGEF3O95398 MTND5P20-201ENST00000448677 143 ntBASIC4.82□□□□□ -1.64
RAPGEF3O95398 SNORD97-201ENST00000459187 142 ntBASIC4.82□□□□□ -1.64
RAPGEF3O95398 RPS26P3-201ENST00000470205 348 ntBASIC4.82□□□□□ -1.64
RAPGEF3O95398 AC126389.1-201ENST00000477436 290 ntBASIC4.82□□□□□ -1.64
RAPGEF3O95398 AC004057.1-201ENST00000485827 348 ntBASIC4.82□□□□□ -1.64
RAPGEF3O95398 RPS15AP36-201ENST00000492022 382 ntBASIC4.82□□□□□ -1.64
RAPGEF3O95398 RNU1-41P-201ENST00000516161 162 ntBASIC4.82□□□□□ -1.64
RAPGEF3O95398 RNU1-48P-201ENST00000516400 162 ntBASIC4.82□□□□□ -1.64
RAPGEF3O95398 SNORA20.3-201ENST00000516880 132 ntBASIC4.82□□□□□ -1.64
RAPGEF3O95398 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.82□□□□□ -1.64
RAPGEF3O95398 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC4.82□□□□□ -1.64
RAPGEF3O95398 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms