Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 RNU6-1316P-201ENST00000384242 108 ntBASIC2.31□□□□□ -2.04
CDH16O75309 RNU6-1257P-201ENST00000384625 110 ntBASIC2.31□□□□□ -2.04
CDH16O75309 MIR524-201ENST00000385242 87 ntBASIC2.31□□□□□ -2.04
CDH16O75309 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.31□□□□□ -2.04
CDH16O75309 AL953862.1-201ENST00000423016 168 ntBASIC2.31□□□□□ -2.04
CDH16O75309 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CDH16O75309 RPS15AP28-201ENST00000435088 386 ntBASIC2.31□□□□□ -2.04
CDH16O75309 SNRPEP7-201ENST00000438350 220 ntBASIC2.31□□□□□ -2.04
CDH16O75309 EEF1B2P7-201ENST00000451177 676 ntBASIC2.31□□□□□ -2.04
CDH16O75309 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.31□□□□□ -2.04
CDH16O75309 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.31□□□□□ -2.04
CDH16O75309 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.31□□□□□ -2.04
CDH16O75309 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CDH16O75309 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CDH16O75309 RPS3P1-201ENST00000456781 192 ntBASIC2.31□□□□□ -2.04
CDH16O75309 AC013267.1-201ENST00000458227 267 ntBASIC2.31□□□□□ -2.04
CDH16O75309 MRPL42P6-201ENST00000486397 371 ntBASIC2.31□□□□□ -2.04
CDH16O75309 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.31□□□□□ -2.04
CDH16O75309 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.31□□□□□ -2.04
CDH16O75309 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.31□□□□□ -2.04
CDH16O75309 AC114781.4-201ENST00000513707 639 ntBASIC2.31□□□□□ -2.04
CDH16O75309 AC110760.3-202ENST00000515177 371 ntBASIC2.31□□□□□ -2.04
CDH16O75309 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.31□□□□□ -2.04
CDH16O75309 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.31□□□□□ -2.04
CDH16O75309 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CDH16O75309 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.31□□□□□ -2.04
CDH16O75309 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.31□□□□□ -2.04
CDH16O75309 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.31□□□□□ -2.04
CDH16O75309 NACAP3-201ENST00000552100 481 ntBASIC2.31□□□□□ -2.04
CDH16O75309 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.31□□□□□ -2.04
CDH16O75309 AC009097.3-201ENST00000563557 1018 ntBASIC2.31□□□□□ -2.04
CDH16O75309 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.31□□□□□ -2.04
CDH16O75309 AC007151.1-201ENST00000572774 483 ntBASIC2.31□□□□□ -2.04
CDH16O75309 MIR5007-201ENST00000583098 95 ntBASIC2.31□□□□□ -2.04
CDH16O75309 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.31□□□□□ -2.04
CDH16O75309 AC005332.10-201ENST00000612725 619 ntBASIC2.31□□□□□ -2.04
CDH16O75309 CU459211.1-201ENST00000635667 749 ntBASIC2.31□□□□□ -2.04
CDH16O75309 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CDH16O75309 DDX43P2-201ENST00000604753 1354 ntBASIC2.31□□□□□ -2.04
CDH16O75309 ELF2P3-201ENST00000445099 1506 ntBASIC2.31□□□□□ -2.04
CDH16O75309 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CDH16O75309 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.3□□□□□ -2.04
CDH16O75309 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
CDH16O75309 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.3□□□□□ -2.04
CDH16O75309 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.3□□□□□ -2.04
CDH16O75309 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CDH16O75309 MORF4L1P6-201ENST00000418771 268 ntBASIC2.3□□□□□ -2.04
CDH16O75309 MICF-203ENST00000432679 129 ntBASIC2.3□□□□□ -2.04
CDH16O75309 MTCO3P45-201ENST00000443036 613 ntBASIC2.3□□□□□ -2.04
CDH16O75309 SNORA59A-201ENST00000459326 152 ntBASIC2.3□□□□□ -2.04
CDH16O75309 MEMO1P3-201ENST00000459811 302 ntBASIC2.3□□□□□ -2.04
CDH16O75309 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.3□□□□□ -2.04
CDH16O75309 UBE2DNL-203ENST00000474922 222 ntBASIC2.3□□□□□ -2.04
CDH16O75309 HMGB1P36-201ENST00000487709 576 ntBASIC2.3□□□□□ -2.04
CDH16O75309 RPS15AP36-201ENST00000492022 382 ntBASIC2.3□□□□□ -2.04
CDH16O75309 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.3□□□□□ -2.04
CDH16O75309 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.3□□□□□ -2.04
CDH16O75309 AP001646.1-201ENST00000527936 915 ntBASIC2.3□□□□□ -2.04
CDH16O75309 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.3□□□□□ -2.04
CDH16O75309 AC007621.1-201ENST00000604544 437 ntBASIC2.3□□□□□ -2.04
CDH16O75309 AC004805.2-201ENST00000605382 482 ntBASIC2.3□□□□□ -2.04
CDH16O75309 AL121917.1-203ENST00000605534 577 ntBASIC2.3□□□□□ -2.04
CDH16O75309 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.3□□□□□ -2.04
CDH16O75309 AC245884.12-201ENST00000615364 59 ntBASIC2.3□□□□□ -2.04
CDH16O75309 AP002791.1-201ENST00000623291 381 ntBASIC2.3□□□□□ -2.04
CDH16O75309 MIR7157-201ENST00000635801 60 ntBASIC2.3□□□□□ -2.04
CDH16O75309 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
CDH16O75309 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CDH16O75309 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.3□□□□□ -2.04
CDH16O75309 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CDH16O75309 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CDH16O75309 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CDH16O75309 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
CDH16O75309 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CDH16O75309 Y_RNA.245-201ENST00000364493 95 ntBASIC2.29□□□□□ -2.04
CDH16O75309 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.29□□□□□ -2.04
CDH16O75309 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.29□□□□□ -2.04
CDH16O75309 USP9YP11-201ENST00000427537 717 ntBASIC2.29□□□□□ -2.04
CDH16O75309 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.29□□□□□ -2.04
CDH16O75309 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.29□□□□□ -2.04
CDH16O75309 ANKRD26P4-201ENST00000455755 950 ntBASIC2.29□□□□□ -2.04
CDH16O75309 AL121769.1-201ENST00000469473 401 ntBASIC2.29□□□□□ -2.04
CDH16O75309 AC090255.1-201ENST00000495779 349 ntBASIC2.29□□□□□ -2.04
CDH16O75309 MTND5P13-201ENST00000513046 1079 ntBASIC2.29□□□□□ -2.04
CDH16O75309 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.29□□□□□ -2.04
CDH16O75309 RNU6-927P-201ENST00000516199 100 ntBASIC2.29□□□□□ -2.04
CDH16O75309 RNA5SP148-201ENST00000516527 94 ntBASIC2.29□□□□□ -2.04
CDH16O75309 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.29□□□□□ -2.04
CDH16O75309 UBTFL10-201ENST00000528532 562 ntBASIC2.29□□□□□ -2.04
CDH16O75309 AC024619.4-201ENST00000580924 316 ntBASIC2.29□□□□□ -2.04
CDH16O75309 MIR3199-1-201ENST00000582434 88 ntBASIC2.29□□□□□ -2.04
CDH16O75309 AC025588.2-201ENST00000604851 466 ntBASIC2.29□□□□□ -2.04
CDH16O75309 AC090186.1-201ENST00000605991 572 ntBASIC2.29□□□□□ -2.04
CDH16O75309 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.29□□□□□ -2.04
CDH16O75309 AC025034.2-201ENST00000623264 286 ntBASIC2.29□□□□□ -2.04
CDH16O75309 MIR203B-201ENST00000636080 86 ntBASIC2.29□□□□□ -2.04
CDH16O75309 MIR3199-2-201ENST00000636243 86 ntBASIC2.29□□□□□ -2.04
CDH16O75309 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
CDH16O75309 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CDH16O75309 MTND5P29-201ENST00000458676 1807 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms