Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.07□□□□□ -1.92
SSX4O60224 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.07□□□□□ -1.92
SSX4O60224 AL158156.1-201ENST00000422509 473 ntBASIC3.07□□□□□ -1.92
SSX4O60224 RPL7P46-201ENST00000425129 740 ntBASIC3.07□□□□□ -1.92
SSX4O60224 AC133104.1-201ENST00000429100 218 ntBASIC3.07□□□□□ -1.92
SSX4O60224 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.07□□□□□ -1.92
SSX4O60224 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.07□□□□□ -1.92
SSX4O60224 Z82210.1-201ENST00000440037 231 ntBASIC3.07□□□□□ -1.92
SSX4O60224 BNIP3P2-201ENST00000441221 577 ntBASIC3.07□□□□□ -1.92
SSX4O60224 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.07□□□□□ -1.92
SSX4O60224 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.07□□□□□ -1.92
SSX4O60224 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.07□□□□□ -1.92
SSX4O60224 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.07□□□□□ -1.92
SSX4O60224 AC087588.1-201ENST00000462203 316 ntBASIC3.07□□□□□ -1.92
SSX4O60224 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.07□□□□□ -1.92
SSX4O60224 AC138853.1-201ENST00000503549 823 ntBASIC3.07□□□□□ -1.92
SSX4O60224 AC091435.1-201ENST00000505442 584 ntBASIC3.07□□□□□ -1.92
SSX4O60224 RNU1-143P-201ENST00000516296 146 ntBASIC3.07□□□□□ -1.92
SSX4O60224 RNA5SP291-201ENST00000517222 105 ntBASIC3.07□□□□□ -1.92
SSX4O60224 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.07□□□□□ -1.92
SSX4O60224 AC245166.1-201ENST00000521012 253 ntBASIC3.07□□□□□ -1.92
SSX4O60224 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.07□□□□□ -1.92
SSX4O60224 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.07□□□□□ -1.92
SSX4O60224 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.07□□□□□ -1.92
SSX4O60224 AC009063.1-201ENST00000563342 702 ntBASIC3.07□□□□□ -1.92
SSX4O60224 MTCO3P24-201ENST00000572729 782 ntBASIC3.07□□□□□ -1.92
SSX4O60224 AC068790.2-201ENST00000602601 557 ntBASIC3.07□□□□□ -1.92
SSX4O60224 AL133393.1-201ENST00000603277 287 ntBASIC3.07□□□□□ -1.92
SSX4O60224 NDUFA8P1-201ENST00000605525 367 ntBASIC3.07□□□□□ -1.92
SSX4O60224 U1.23-201ENST00000610293 146 ntBASIC3.07□□□□□ -1.92
SSX4O60224 RNU1-68P-201ENST00000615382 146 ntBASIC3.07□□□□□ -1.92
SSX4O60224 AL355365.1-201ENST00000616480 294 ntBASIC3.07□□□□□ -1.92
SSX4O60224 U1.39-201ENST00000621562 146 ntBASIC3.07□□□□□ -1.92
SSX4O60224 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.07□□□□□ -1.92
SSX4O60224 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
SSX4O60224 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
SSX4O60224 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SSX4O60224 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.06□□□□□ -1.92
SSX4O60224 AC073343.1-201ENST00000328239 651 ntBASIC3.06□□□□□ -1.92
SSX4O60224 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SSX4O60224 Y_RNA.22-201ENST00000362492 102 ntBASIC3.06□□□□□ -1.92
SSX4O60224 RNU6-181P-201ENST00000363225 107 ntBASIC3.06□□□□□ -1.92
SSX4O60224 SNORD116-4-201ENST00000384733 96 ntBASIC3.06□□□□□ -1.92
SSX4O60224 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
SSX4O60224 Y_RNA.582-201ENST00000391023 95 ntBASIC3.06□□□□□ -1.92
SSX4O60224 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SSX4O60224 AL354719.1-201ENST00000406535 843 ntBASIC3.06□□□□□ -1.92
SSX4O60224 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.06□□□□□ -1.92
SSX4O60224 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SSX4O60224 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.06□□□□□ -1.92
SSX4O60224 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SSX4O60224 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.06□□□□□ -1.92
SSX4O60224 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.06□□□□□ -1.92
SSX4O60224 AC092047.1-201ENST00000424997 240 ntBASIC3.06□□□□□ -1.92
SSX4O60224 MED13P1-201ENST00000428342 171 ntBASIC3.06□□□□□ -1.92
SSX4O60224 CYCSP4-201ENST00000429682 331 ntBASIC3.06□□□□□ -1.92
SSX4O60224 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.06□□□□□ -1.92
SSX4O60224 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.06□□□□□ -1.92
SSX4O60224 C1DP4-201ENST00000455429 424 ntBASIC3.06□□□□□ -1.92
SSX4O60224 TPTE2P5-203ENST00000458118 728 ntBASIC3.06□□□□□ -1.92
SSX4O60224 RN7SL601P-201ENST00000471221 293 ntBASIC3.06□□□□□ -1.92
SSX4O60224 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.06□□□□□ -1.92
SSX4O60224 RN7SL283P-201ENST00000489055 303 ntBASIC3.06□□□□□ -1.92
SSX4O60224 AC007182.2-201ENST00000489251 402 ntBASIC3.06□□□□□ -1.92
SSX4O60224 AL160314.1-201ENST00000490836 438 ntBASIC3.06□□□□□ -1.92
SSX4O60224 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.06□□□□□ -1.92
SSX4O60224 Y_RNA.655-201ENST00000515919 96 ntBASIC3.06□□□□□ -1.92
SSX4O60224 SNORA70.18-201ENST00000516696 98 ntBASIC3.06□□□□□ -1.92
SSX4O60224 RNU6-1282P-201ENST00000516735 96 ntBASIC3.06□□□□□ -1.92
SSX4O60224 RNU6-445P-201ENST00000516949 107 ntBASIC3.06□□□□□ -1.92
SSX4O60224 RNA5SP471-201ENST00000516971 106 ntBASIC3.06□□□□□ -1.92
SSX4O60224 RANP9-201ENST00000519957 271 ntBASIC3.06□□□□□ -1.92
SSX4O60224 ATP5F1P5-201ENST00000526403 760 ntBASIC3.06□□□□□ -1.92
SSX4O60224 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.06□□□□□ -1.92
SSX4O60224 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.06□□□□□ -1.92
SSX4O60224 TRAV37-201ENST00000553906 342 ntBASIC3.06□□□□□ -1.92
SSX4O60224 AC034105.3-201ENST00000565294 442 ntBASIC3.06□□□□□ -1.92
SSX4O60224 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.06□□□□□ -1.92
SSX4O60224 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.06□□□□□ -1.92
SSX4O60224 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.06□□□□□ -1.92
SSX4O60224 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.06□□□□□ -1.92
SSX4O60224 AL137003.2-201ENST00000606924 2538 ntBASIC3.06□□□□□ -1.92
SSX4O60224 AC034102.8-201ENST00000615146 484 ntBASIC3.06□□□□□ -1.92
SSX4O60224 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SSX4O60224 AC006111.3-201ENST00000622137 383 ntBASIC3.06□□□□□ -1.92
SSX4O60224 AC007998.5-201ENST00000622938 237 ntBASIC3.06□□□□□ -1.92
SSX4O60224 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.06□□□□□ -1.92
SSX4O60224 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.06□□□□□ -1.92
SSX4O60224 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
SSX4O60224 MAPK10-362ENST00000641864 4484 ntBASIC3.06□□□□□ -1.92
SSX4O60224 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.05□□□□□ -1.92
SSX4O60224 AC110774.1-201ENST00000623567 2018 ntBASIC3.05□□□□□ -1.92
SSX4O60224 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SSX4O60224 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.05□□□□□ -1.92
SSX4O60224 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
SSX4O60224 RNA5SP383-201ENST00000362934 120 ntBASIC3.05□□□□□ -1.92
SSX4O60224 RNU6-946P-201ENST00000383878 107 ntBASIC3.05□□□□□ -1.92
SSX4O60224 RNU5A-6P-201ENST00000384136 116 ntBASIC3.05□□□□□ -1.92
SSX4O60224 Z92545.1-201ENST00000411782 234 ntBASIC3.05□□□□□ -1.92
SSX4O60224 NDUFB4P5-201ENST00000415445 361 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms