Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 AC096576.1-201ENST00000489014 359 ntBASIC1.66□□□□□ -2.14
SSNA1O43805 HMGB3P17-201ENST00000504195 649 ntBASIC1.66□□□□□ -2.14
SSNA1O43805 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC1.66□□□□□ -2.14
SSNA1O43805 RNA5SP112-201ENST00000515937 99 ntBASIC1.66□□□□□ -2.14
SSNA1O43805 RN7SKP132-201ENST00000516001 208 ntBASIC1.66□□□□□ -2.14
SSNA1O43805 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.66□□□□□ -2.14
SSNA1O43805 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC1.66□□□□□ -2.14
SSNA1O43805 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.66□□□□□ -2.14
SSNA1O43805 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.66□□□□□ -2.14
SSNA1O43805 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.66□□□□□ -2.14
SSNA1O43805 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SSNA1O43805 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.66□□□□□ -2.14
SSNA1O43805 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC1.66□□□□□ -2.14
SSNA1O43805 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.66□□□□□ -2.14
SSNA1O43805 VN1R92P-201ENST00000598511 928 ntBASIC1.66□□□□□ -2.14
SSNA1O43805 AL020997.2-201ENST00000602607 184 ntBASIC1.66□□□□□ -2.14
SSNA1O43805 AL583856.2-201ENST00000606298 543 ntBASIC1.66□□□□□ -2.14
SSNA1O43805 AC005332.6-201ENST00000613178 446 ntBASIC1.66□□□□□ -2.14
SSNA1O43805 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
SSNA1O43805 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.65□□□□□ -2.15
SSNA1O43805 Y_RNA.245-201ENST00000364493 95 ntBASIC1.65□□□□□ -2.15
SSNA1O43805 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC1.65□□□□□ -2.15
SSNA1O43805 MIR7-3-201ENST00000384898 110 ntBASIC1.65□□□□□ -2.15
SSNA1O43805 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC1.65□□□□□ -2.15
SSNA1O43805 TXNP7-201ENST00000406296 293 ntBASIC1.65□□□□□ -2.15
SSNA1O43805 BTF3L4P3-201ENST00000418879 476 ntBASIC1.65□□□□□ -2.15
SSNA1O43805 RPL31P63-201ENST00000422565 375 ntBASIC1.65□□□□□ -2.15
SSNA1O43805 AC019097.1-201ENST00000424783 735 ntBASIC1.65□□□□□ -2.15
SSNA1O43805 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.65□□□□□ -2.15
SSNA1O43805 ELOCP14-201ENST00000428070 331 ntBASIC1.65□□□□□ -2.15
SSNA1O43805 ELOCP7-201ENST00000439968 331 ntBASIC1.65□□□□□ -2.15
SSNA1O43805 AL161651.1-201ENST00000440882 223 ntBASIC1.65□□□□□ -2.15
SSNA1O43805 RPS3AP12-201ENST00000443616 753 ntBASIC1.65□□□□□ -2.15
SSNA1O43805 HMGN2P10-201ENST00000448085 265 ntBASIC1.65□□□□□ -2.15
SSNA1O43805 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.65□□□□□ -2.15
SSNA1O43805 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
SSNA1O43805 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.65□□□□□ -2.15
SSNA1O43805 AC026414.1-201ENST00000504046 698 ntBASIC1.65□□□□□ -2.15
SSNA1O43805 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.65□□□□□ -2.15
SSNA1O43805 SNORA25.11-201ENST00000515935 105 ntBASIC1.65□□□□□ -2.15
SSNA1O43805 IGHVII-62-1-201ENST00000519283 235 ntBASIC1.65□□□□□ -2.15
SSNA1O43805 RPL7P20-201ENST00000520308 745 ntBASIC1.65□□□□□ -2.15
SSNA1O43805 AC107953.1-201ENST00000522216 297 ntBASIC1.65□□□□□ -2.15
SSNA1O43805 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.65□□□□□ -2.15
SSNA1O43805 AC233702.2-202ENST00000562547 291 ntBASIC1.65□□□□□ -2.15
SSNA1O43805 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
SSNA1O43805 ROCK1P1-201ENST00000573767 549 ntBASIC1.65□□□□□ -2.15
SSNA1O43805 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC1.65□□□□□ -2.15
SSNA1O43805 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.65□□□□□ -2.15
SSNA1O43805 MIR4325-201ENST00000583049 90 ntBASIC1.65□□□□□ -2.15
SSNA1O43805 NRBF2P1-201ENST00000587407 859 ntBASIC1.65□□□□□ -2.15
SSNA1O43805 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.65□□□□□ -2.15
SSNA1O43805 MIR8057-201ENST00000620957 69 ntBASIC1.65□□□□□ -2.15
SSNA1O43805 AC019226.1-201ENST00000625666 515 ntBASIC1.65□□□□□ -2.15
SSNA1O43805 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.65□□□□□ -2.15
SSNA1O43805 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
SSNA1O43805 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
SSNA1O43805 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
SSNA1O43805 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
SSNA1O43805 U3.13-201ENST00000364804 214 ntBASIC1.64□□□□□ -2.15
SSNA1O43805 U8.14-201ENST00000390843 143 ntBASIC1.64□□□□□ -2.15
SSNA1O43805 SNORA11.4-201ENST00000408823 129 ntBASIC1.64□□□□□ -2.15
SSNA1O43805 RNU2-63P-201ENST00000410792 194 ntBASIC1.64□□□□□ -2.15
SSNA1O43805 RNA5SP450-201ENST00000411206 102 ntBASIC1.64□□□□□ -2.15
SSNA1O43805 AC096664.2-201ENST00000411843 406 ntBASIC1.64□□□□□ -2.15
SSNA1O43805 EIF1AXP1-201ENST00000419267 435 ntBASIC1.64□□□□□ -2.15
SSNA1O43805 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC1.64□□□□□ -2.15
SSNA1O43805 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.64□□□□□ -2.15
SSNA1O43805 AC063976.3-201ENST00000426849 329 ntBASIC1.64□□□□□ -2.15
SSNA1O43805 RPL23AP83-201ENST00000434984 473 ntBASIC1.64□□□□□ -2.15
SSNA1O43805 AC009238.1-201ENST00000442165 424 ntBASIC1.64□□□□□ -2.15
SSNA1O43805 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.64□□□□□ -2.15
SSNA1O43805 AC009237.6-201ENST00000446969 424 ntBASIC1.64□□□□□ -2.15
SSNA1O43805 BX322784.1-201ENST00000455793 1077 ntBASIC1.64□□□□□ -2.15
SSNA1O43805 RNA5SP281-201ENST00000516504 135 ntBASIC1.64□□□□□ -2.15
SSNA1O43805 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
SSNA1O43805 AP005639.2-201ENST00000527592 928 ntBASIC1.64□□□□□ -2.15
SSNA1O43805 AP003497.1-201ENST00000528472 562 ntBASIC1.64□□□□□ -2.15
SSNA1O43805 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.64□□□□□ -2.15
SSNA1O43805 AC027176.1-201ENST00000560204 514 ntBASIC1.64□□□□□ -2.15
SSNA1O43805 AC098483.2-201ENST00000603158 454 ntBASIC1.64□□□□□ -2.15
SSNA1O43805 OR2AS2P-201ENST00000606902 342 ntBASIC1.64□□□□□ -2.15
SSNA1O43805 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
SSNA1O43805 MIR6817-201ENST00000615588 66 ntBASIC1.64□□□□□ -2.15
SSNA1O43805 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.64□□□□□ -2.15
SSNA1O43805 AL137790.1-201ENST00000634283 177 ntBASIC1.64□□□□□ -2.15
SSNA1O43805 FTO-223ENST00000640179 210 ntTSL 5 BASIC1.64□□□□□ -2.15
SSNA1O43805 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.64□□□□□ -2.15
SSNA1O43805 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.64□□□□□ -2.15
SSNA1O43805 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
SSNA1O43805 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC1.63□□□□□ -2.15
SSNA1O43805 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SSNA1O43805 RNU6-359P-201ENST00000365466 108 ntBASIC1.63□□□□□ -2.15
SSNA1O43805 MIR147B-201ENST00000390185 80 ntBASIC1.63□□□□□ -2.15
SSNA1O43805 RNU2-42P-201ENST00000410697 113 ntBASIC1.63□□□□□ -2.15
SSNA1O43805 RNU6-516P-201ENST00000411381 104 ntBASIC1.63□□□□□ -2.15
SSNA1O43805 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.63□□□□□ -2.15
SSNA1O43805 MTCO1P3-201ENST00000429327 192 ntBASIC1.63□□□□□ -2.15
SSNA1O43805 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SSNA1O43805 AC055855.1-201ENST00000489563 579 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 142.2 ms