Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 DEFA7P-201ENST00000382676 285 ntBASIC2.69□□□□□ -1.98
CLDN3O15551 AL359511.1-201ENST00000402970 211 ntBASIC2.69□□□□□ -1.98
CLDN3O15551 RNU6-757P-201ENST00000410334 100 ntBASIC2.69□□□□□ -1.98
CLDN3O15551 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.69□□□□□ -1.98
CLDN3O15551 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.69□□□□□ -1.98
CLDN3O15551 AC009963.1-201ENST00000417265 157 ntBASIC2.69□□□□□ -1.98
CLDN3O15551 USP9YP13-201ENST00000417797 480 ntBASIC2.69□□□□□ -1.98
CLDN3O15551 ELOCP9-201ENST00000418624 239 ntBASIC2.69□□□□□ -1.98
CLDN3O15551 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CLDN3O15551 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.69□□□□□ -1.98
CLDN3O15551 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.69□□□□□ -1.98
CLDN3O15551 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.69□□□□□ -1.98
CLDN3O15551 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.69□□□□□ -1.98
CLDN3O15551 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.69□□□□□ -1.98
CLDN3O15551 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CLDN3O15551 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.69□□□□□ -1.98
CLDN3O15551 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.69□□□□□ -1.98
CLDN3O15551 RPS27P27-201ENST00000498779 255 ntBASIC2.69□□□□□ -1.98
CLDN3O15551 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CLDN3O15551 AC093012.1-202ENST00000549403 582 ntBASIC2.69□□□□□ -1.98
CLDN3O15551 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.69□□□□□ -1.98
CLDN3O15551 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.69□□□□□ -1.98
CLDN3O15551 AP000787.2-201ENST00000604432 568 ntBASIC2.69□□□□□ -1.98
CLDN3O15551 AC007038.2-201ENST00000608095 740 ntBASIC2.69□□□□□ -1.98
CLDN3O15551 AC239868.4-201ENST00000608318 671 ntBASIC2.69□□□□□ -1.98
CLDN3O15551 AC072039.2-201ENST00000608883 439 ntBASIC2.69□□□□□ -1.98
CLDN3O15551 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.69□□□□□ -1.98
CLDN3O15551 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.69□□□□□ -1.98
CLDN3O15551 IGHVIII-44-202ENST00000636235 289 ntBASIC2.69□□□□□ -1.98
CLDN3O15551 AC092125.1-201ENST00000562568 1995 ntBASIC2.69□□□□□ -1.98
CLDN3O15551 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CLDN3O15551 AC106754.1-201ENST00000562632 1513 ntBASIC2.68□□□□□ -1.98
CLDN3O15551 RNU4-82P-201ENST00000362443 140 ntBASIC2.68□□□□□ -1.98
CLDN3O15551 RNU6-461P-201ENST00000364195 107 ntBASIC2.68□□□□□ -1.98
CLDN3O15551 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
CLDN3O15551 RNU6-723P-201ENST00000383973 107 ntBASIC2.68□□□□□ -1.98
CLDN3O15551 CCNG1P1-201ENST00000406783 885 ntBASIC2.68□□□□□ -1.98
CLDN3O15551 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.68□□□□□ -1.98
CLDN3O15551 MTCO2P17-201ENST00000424336 677 ntBASIC2.68□□□□□ -1.98
CLDN3O15551 FCF1P1-201ENST00000432690 571 ntBASIC2.68□□□□□ -1.98
CLDN3O15551 AC010153.1-201ENST00000432862 727 ntBASIC2.68□□□□□ -1.98
CLDN3O15551 FAM103A2P-201ENST00000444122 354 ntBASIC2.68□□□□□ -1.98
CLDN3O15551 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.68□□□□□ -1.98
CLDN3O15551 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.68□□□□□ -1.98
CLDN3O15551 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.68□□□□□ -1.98
CLDN3O15551 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.68□□□□□ -1.98
CLDN3O15551 RNA5SP471-201ENST00000516971 106 ntBASIC2.68□□□□□ -1.98
CLDN3O15551 AC007115.1-201ENST00000546853 234 ntBASIC2.68□□□□□ -1.98
CLDN3O15551 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.68□□□□□ -1.98
CLDN3O15551 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.68□□□□□ -1.98
CLDN3O15551 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.68□□□□□ -1.98
CLDN3O15551 MIR4513-201ENST00000581077 86 ntBASIC2.68□□□□□ -1.98
CLDN3O15551 BNIP3P23-201ENST00000599655 511 ntBASIC2.68□□□□□ -1.98
CLDN3O15551 AC245517.5-201ENST00000611529 162 ntBASIC2.68□□□□□ -1.98
CLDN3O15551 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.68□□□□□ -1.98
CLDN3O15551 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.68□□□□□ -1.98
CLDN3O15551 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.68□□□□□ -1.98
CLDN3O15551 AC097655.1-201ENST00000635075 318 ntBASIC2.68□□□□□ -1.98
CLDN3O15551 MTND5P33-201ENST00000571250 1450 ntBASIC2.68□□□□□ -1.98
CLDN3O15551 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.68□□□□□ -1.98
CLDN3O15551 AC006378.2-201ENST00000623178 2476 ntBASIC2.68□□□□□ -1.98
CLDN3O15551 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.68□□□□□ -1.98
CLDN3O15551 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
CLDN3O15551 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.67□□□□□ -1.98
CLDN3O15551 AL359693.1-201ENST00000614959 2407 ntBASIC2.67□□□□□ -1.98
CLDN3O15551 SNORA68.1-201ENST00000364537 132 ntBASIC2.67□□□□□ -1.98
CLDN3O15551 MIR19A-201ENST00000384878 82 ntBASIC2.67□□□□□ -1.98
CLDN3O15551 AC119751.3-201ENST00000399720 670 ntBASIC2.67□□□□□ -1.98
CLDN3O15551 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CLDN3O15551 HMGB1P49-201ENST00000418882 569 ntBASIC2.67□□□□□ -1.98
CLDN3O15551 SUMO1P4-201ENST00000429430 302 ntBASIC2.67□□□□□ -1.98
CLDN3O15551 AC084290.1-201ENST00000434995 374 ntBASIC2.67□□□□□ -1.98
CLDN3O15551 SNRPEP9-201ENST00000436794 238 ntBASIC2.67□□□□□ -1.98
CLDN3O15551 AC004854.1-201ENST00000440356 349 ntBASIC2.67□□□□□ -1.98
CLDN3O15551 DUXAP8-207ENST00000456786 622 ntBASIC2.67□□□□□ -1.98
CLDN3O15551 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.67□□□□□ -1.98
CLDN3O15551 RPL37P6-201ENST00000460682 294 ntBASIC2.67□□□□□ -1.98
CLDN3O15551 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.67□□□□□ -1.98
CLDN3O15551 RNU6-927P-201ENST00000516199 100 ntBASIC2.67□□□□□ -1.98
CLDN3O15551 AC109329.2-201ENST00000519658 482 ntBASIC2.67□□□□□ -1.98
CLDN3O15551 HMGB1P41-201ENST00000520234 440 ntBASIC2.67□□□□□ -1.98
CLDN3O15551 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.67□□□□□ -1.98
CLDN3O15551 MIR3117-201ENST00000584034 78 ntBASIC2.67□□□□□ -1.98
CLDN3O15551 DPPA3P3-201ENST00000603842 430 ntBASIC2.67□□□□□ -1.98
CLDN3O15551 AC004805.2-201ENST00000605382 482 ntBASIC2.67□□□□□ -1.98
CLDN3O15551 AC097468.3-201ENST00000607956 456 ntBASIC2.67□□□□□ -1.98
CLDN3O15551 AC009974.1-201ENST00000608881 455 ntBASIC2.67□□□□□ -1.98
CLDN3O15551 AC013562.2-201ENST00000611632 603 ntBASIC2.67□□□□□ -1.98
CLDN3O15551 AC025034.2-201ENST00000623264 286 ntBASIC2.67□□□□□ -1.98
CLDN3O15551 AC068057.2-201ENST00000624047 895 ntBASIC2.67□□□□□ -1.98
CLDN3O15551 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CLDN3O15551 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CLDN3O15551 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.67□□□□□ -1.98
CLDN3O15551 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.66□□□□□ -1.98
CLDN3O15551 AL096701.2-201ENST00000416920 238 ntBASIC2.66□□□□□ -1.98
CLDN3O15551 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.66□□□□□ -1.98
CLDN3O15551 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.66□□□□□ -1.98
CLDN3O15551 MTATP6P30-201ENST00000443540 664 ntBASIC2.66□□□□□ -1.98
CLDN3O15551 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.66□□□□□ -1.98
CLDN3O15551 AC020550.1-201ENST00000447385 163 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms