Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.12□□□□□ -2.07
DFFAO00273 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.12□□□□□ -2.07
DFFAO00273 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.12□□□□□ -2.07
DFFAO00273 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.12□□□□□ -2.07
DFFAO00273 AC121758.2-201ENST00000553271 193 ntBASIC2.12□□□□□ -2.07
DFFAO00273 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.12□□□□□ -2.07
DFFAO00273 Y_RNA.783-201ENST00000613546 102 ntBASIC2.12□□□□□ -2.07
DFFAO00273 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.12□□□□□ -2.07
DFFAO00273 DDX10P1-201ENST00000448545 1933 ntBASIC2.12□□□□□ -2.07
DFFAO00273 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
DFFAO00273 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.12□□□□□ -2.07
DFFAO00273 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
DFFAO00273 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.11□□□□□ -2.07
DFFAO00273 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.11□□□□□ -2.07
DFFAO00273 RNU4-51P-201ENST00000364206 140 ntBASIC2.11□□□□□ -2.07
DFFAO00273 SNORA51.11-201ENST00000384442 131 ntBASIC2.11□□□□□ -2.07
DFFAO00273 SNORA40.2-201ENST00000390847 128 ntBASIC2.11□□□□□ -2.07
DFFAO00273 MIR888-201ENST00000401186 77 ntBASIC2.11□□□□□ -2.07
DFFAO00273 AL590084.1-201ENST00000407885 387 ntBASIC2.11□□□□□ -2.07
DFFAO00273 RNU2-49P-201ENST00000410666 184 ntBASIC2.11□□□□□ -2.07
DFFAO00273 AC023141.4-201ENST00000412031 328 ntBASIC2.11□□□□□ -2.07
DFFAO00273 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.11□□□□□ -2.07
DFFAO00273 AL451054.2-201ENST00000420896 202 ntBASIC2.11□□□□□ -2.07
DFFAO00273 AC027124.2-201ENST00000428249 105 ntBASIC2.11□□□□□ -2.07
DFFAO00273 Z98742.2-201ENST00000431564 187 ntBASIC2.11□□□□□ -2.07
DFFAO00273 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.11□□□□□ -2.07
DFFAO00273 Z80107.1-201ENST00000436830 412 ntBASIC2.11□□□□□ -2.07
DFFAO00273 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.11□□□□□ -2.07
DFFAO00273 RPL12P25-201ENST00000455592 494 ntBASIC2.11□□□□□ -2.07
DFFAO00273 RPL26P9-201ENST00000457466 433 ntBASIC2.11□□□□□ -2.07
DFFAO00273 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.11□□□□□ -2.07
DFFAO00273 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
DFFAO00273 AC005832.3-201ENST00000537929 631 ntBASIC2.11□□□□□ -2.07
DFFAO00273 AC092451.2-201ENST00000538746 658 ntBASIC2.11□□□□□ -2.07
DFFAO00273 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.11□□□□□ -2.07
DFFAO00273 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.11□□□□□ -2.07
DFFAO00273 AL132657.2-201ENST00000564417 358 ntBASIC2.11□□□□□ -2.07
DFFAO00273 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.11□□□□□ -2.07
DFFAO00273 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.11□□□□□ -2.07
DFFAO00273 AC002545.1-201ENST00000592511 181 ntBASIC2.11□□□□□ -2.07
DFFAO00273 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.11□□□□□ -2.07
DFFAO00273 AC068620.3-201ENST00000602749 560 ntBASIC2.11□□□□□ -2.07
DFFAO00273 AC024060.1-201ENST00000607052 494 ntBASIC2.11□□□□□ -2.07
DFFAO00273 AC009268.2-201ENST00000621925 457 ntBASIC2.11□□□□□ -2.07
DFFAO00273 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.11□□□□□ -2.07
DFFAO00273 AL356266.1-201ENST00000623311 483 ntBASIC2.11□□□□□ -2.07
DFFAO00273 AC068057.2-201ENST00000624047 895 ntBASIC2.11□□□□□ -2.07
DFFAO00273 AC231657.1-201ENST00000624313 397 ntBASIC2.11□□□□□ -2.07
DFFAO00273 OR1S1-201ENST00000624470 978 ntBASIC2.11□□□□□ -2.07
DFFAO00273 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
DFFAO00273 RNU6-884P-201ENST00000363889 107 ntBASIC2.1□□□□□ -2.07
DFFAO00273 RNA5SP160-201ENST00000364866 120 ntBASIC2.1□□□□□ -2.07
DFFAO00273 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
DFFAO00273 AL139156.1-201ENST00000412785 841 ntBASIC2.1□□□□□ -2.07
DFFAO00273 MTND1P23-201ENST00000416931 372 ntBASIC2.1□□□□□ -2.07
DFFAO00273 MTND5P14-201ENST00000441481 1267 ntBASIC2.1□□□□□ -2.07
DFFAO00273 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.1□□□□□ -2.07
DFFAO00273 AL021397.1-201ENST00000451806 248 ntBASIC2.1□□□□□ -2.07
DFFAO00273 AL139109.1-201ENST00000455491 297 ntBASIC2.1□□□□□ -2.07
DFFAO00273 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.1□□□□□ -2.07
DFFAO00273 RPS29P20-201ENST00000489592 171 ntBASIC2.1□□□□□ -2.07
DFFAO00273 AC093752.1-206ENST00000511823 336 ntBASIC2.1□□□□□ -2.07
DFFAO00273 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.1□□□□□ -2.07
DFFAO00273 RNU5F-8P-201ENST00000515941 111 ntBASIC2.1□□□□□ -2.07
DFFAO00273 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.1□□□□□ -2.07
DFFAO00273 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.1□□□□□ -2.07
DFFAO00273 AC023824.2-201ENST00000566185 400 ntBASIC2.1□□□□□ -2.07
DFFAO00273 AC002984.1-201ENST00000591692 448 ntBASIC2.1□□□□□ -2.07
DFFAO00273 AL139344.1-201ENST00000605228 195 ntBASIC2.1□□□□□ -2.07
DFFAO00273 AC112220.2-201ENST00000605513 533 ntBASIC2.1□□□□□ -2.07
DFFAO00273 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.1□□□□□ -2.07
DFFAO00273 AL138478.1-201ENST00000612252 832 ntBASIC2.1□□□□□ -2.07
DFFAO00273 AC010133.1-201ENST00000615809 842 ntBASIC2.1□□□□□ -2.07
DFFAO00273 AL136981.2-201ENST00000617319 734 ntBASIC2.1□□□□□ -2.07
DFFAO00273 AL158163.2-201ENST00000619110 700 ntBASIC2.1□□□□□ -2.07
DFFAO00273 MIR219B-201ENST00000637023 88 ntBASIC2.1□□□□□ -2.07
DFFAO00273 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.1□□□□□ -2.07
DFFAO00273 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
DFFAO00273 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.1□□□□□ -2.07
DFFAO00273 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.1□□□□□ -2.07
DFFAO00273 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.1□□□□□ -2.07
DFFAO00273 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
DFFAO00273 AC104454.1-201ENST00000421341 1401 ntBASIC2.09□□□□□ -2.07
DFFAO00273 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.09□□□□□ -2.07
DFFAO00273 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
DFFAO00273 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
DFFAO00273 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
DFFAO00273 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
DFFAO00273 RNU6-301P-201ENST00000384277 107 ntBASIC2.09□□□□□ -2.07
DFFAO00273 RNU6-114P-201ENST00000384704 105 ntBASIC2.09□□□□□ -2.07
DFFAO00273 RNU6-253P-201ENST00000384730 105 ntBASIC2.09□□□□□ -2.07
DFFAO00273 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
DFFAO00273 RPL23AP29-201ENST00000397284 453 ntBASIC2.09□□□□□ -2.07
DFFAO00273 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
DFFAO00273 RNU6-1328P-201ENST00000410938 106 ntBASIC2.09□□□□□ -2.07
DFFAO00273 RN7SKP192-201ENST00000411291 327 ntBASIC2.09□□□□□ -2.07
DFFAO00273 AC019070.1-201ENST00000415008 1024 ntBASIC2.09□□□□□ -2.07
DFFAO00273 TIMM9P2-201ENST00000419324 266 ntBASIC2.09□□□□□ -2.07
DFFAO00273 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.09□□□□□ -2.07
DFFAO00273 TRBV26OR9-2-201ENST00000432077 293 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms