Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
USP17L11C9JVI0 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.35□□□□□ -1.55
USP17L11C9JVI0 AL731566.1-201ENST00000620490 1937 ntBASIC5.35□□□□□ -1.55
USP17L11C9JVI0 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
USP17L11C9JVI0 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.34□□□□□ -1.55
USP17L11C9JVI0 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.34□□□□□ -1.55
USP17L11C9JVI0 MTND5P7-201ENST00000413558 1798 ntBASIC5.34□□□□□ -1.55
USP17L11C9JVI0 AC010300.1-201ENST00000600671 5134 ntBASIC5.34□□□□□ -1.55
USP17L11C9JVI0 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.55
USP17L11C9JVI0 AL445487.1-201ENST00000415694 1580 ntBASIC5.34□□□□□ -1.55
USP17L11C9JVI0 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
USP17L11C9JVI0 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
USP17L11C9JVI0 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
USP17L11C9JVI0 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.34□□□□□ -1.55
USP17L11C9JVI0 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.34□□□□□ -1.55
USP17L11C9JVI0 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
USP17L11C9JVI0 U8.8-201ENST00000365399 135 ntBASIC5.34□□□□□ -1.55
USP17L11C9JVI0 MIR659-201ENST00000384963 97 ntBASIC5.34□□□□□ -1.55
USP17L11C9JVI0 MIR1193-201ENST00000408109 78 ntBASIC5.34□□□□□ -1.55
USP17L11C9JVI0 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.34□□□□□ -1.55
USP17L11C9JVI0 MTCO3P8-201ENST00000453691 755 ntBASIC5.34□□□□□ -1.55
USP17L11C9JVI0 RN7SL303P-201ENST00000469773 251 ntBASIC5.34□□□□□ -1.55
USP17L11C9JVI0 AC010285.1-201ENST00000470580 392 ntBASIC5.34□□□□□ -1.55
USP17L11C9JVI0 FO393415.2-201ENST00000480085 343 ntBASIC5.34□□□□□ -1.55
USP17L11C9JVI0 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC5.34□□□□□ -1.55
USP17L11C9JVI0 AL160314.1-201ENST00000490836 438 ntBASIC5.34□□□□□ -1.55
USP17L11C9JVI0 RNU6-1256P-201ENST00000516539 103 ntBASIC5.34□□□□□ -1.55
USP17L11C9JVI0 AC144568.1-201ENST00000520139 137 ntBASIC5.34□□□□□ -1.55
USP17L11C9JVI0 AP005902.1-201ENST00000521358 186 ntBASIC5.34□□□□□ -1.55
USP17L11C9JVI0 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC5.34□□□□□ -1.55
USP17L11C9JVI0 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC5.34□□□□□ -1.55
USP17L11C9JVI0 AC004584.2-201ENST00000570407 410 ntBASIC5.34□□□□□ -1.55
USP17L11C9JVI0 AC006600.1-201ENST00000572529 153 ntBASIC5.34□□□□□ -1.55
USP17L11C9JVI0 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.34□□□□□ -1.55
USP17L11C9JVI0 HMGB2P1-201ENST00000591146 634 ntBASIC5.34□□□□□ -1.55
USP17L11C9JVI0 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.34□□□□□ -1.55
USP17L11C9JVI0 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC5.34□□□□□ -1.55
USP17L11C9JVI0 AC015914.2-201ENST00000618167 288 ntBASIC5.34□□□□□ -1.55
USP17L11C9JVI0 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC5.34□□□□□ -1.55
USP17L11C9JVI0 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.34□□□□□ -1.55
USP17L11C9JVI0 DDX18P3-201ENST00000404856 2007 ntBASIC5.34□□□□□ -1.55
USP17L11C9JVI0 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
USP17L11C9JVI0 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
USP17L11C9JVI0 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
USP17L11C9JVI0 NCAPGP1-201ENST00000505112 1814 ntBASIC5.34□□□□□ -1.55
USP17L11C9JVI0 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
USP17L11C9JVI0 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.33□□□□□ -1.56
USP17L11C9JVI0 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.33□□□□□ -1.56
USP17L11C9JVI0 AL731532.2-201ENST00000623542 1953 ntBASIC5.33□□□□□ -1.56
USP17L11C9JVI0 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
USP17L11C9JVI0 AL672167.1-204ENST00000641875 3017 ntBASIC5.33□□□□□ -1.56
USP17L11C9JVI0 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.33□□□□□ -1.56
USP17L11C9JVI0 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.33□□□□□ -1.56
USP17L11C9JVI0 SALL4P2-201ENST00000423288 2910 ntBASIC5.33□□□□□ -1.56
USP17L11C9JVI0 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
USP17L11C9JVI0 Y_RNA.245-201ENST00000364493 95 ntBASIC5.33□□□□□ -1.56
USP17L11C9JVI0 Y_RNA.276-201ENST00000364732 109 ntBASIC5.33□□□□□ -1.56
USP17L11C9JVI0 Y_RNA.288-201ENST00000364854 92 ntBASIC5.33□□□□□ -1.56
USP17L11C9JVI0 AP000580.1-201ENST00000404439 358 ntBASIC5.33□□□□□ -1.56
USP17L11C9JVI0 EI24P1-201ENST00000416584 867 ntBASIC5.33□□□□□ -1.56
USP17L11C9JVI0 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC5.33□□□□□ -1.56
USP17L11C9JVI0 RPS29P17-201ENST00000430795 166 ntBASIC5.33□□□□□ -1.56
USP17L11C9JVI0 RPL21P2-201ENST00000440049 481 ntBASIC5.33□□□□□ -1.56
USP17L11C9JVI0 DYNLT3P2-201ENST00000442517 295 ntBASIC5.33□□□□□ -1.56
USP17L11C9JVI0 CHEK2P4-201ENST00000450340 246 ntBASIC5.33□□□□□ -1.56
USP17L11C9JVI0 AC133473.1-201ENST00000455173 299 ntBASIC5.33□□□□□ -1.56
USP17L11C9JVI0 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.33□□□□□ -1.56
USP17L11C9JVI0 HMGN2P13-201ENST00000476476 274 ntBASIC5.33□□□□□ -1.56
USP17L11C9JVI0 MAL2-206ENST00000522187 547 ntTSL 4 BASIC5.33□□□□□ -1.56
USP17L11C9JVI0 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC5.33□□□□□ -1.56
USP17L11C9JVI0 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.33□□□□□ -1.56
USP17L11C9JVI0 AC005357.1-201ENST00000588399 301 ntBASIC5.33□□□□□ -1.56
USP17L11C9JVI0 VN1R91P-201ENST00000594377 169 ntBASIC5.33□□□□□ -1.56
USP17L11C9JVI0 SNRPGP15-201ENST00000600149 222 ntBASIC5.33□□□□□ -1.56
USP17L11C9JVI0 AC009314.1-201ENST00000603871 304 ntBASIC5.33□□□□□ -1.56
USP17L11C9JVI0 AC004852.3-201ENST00000614131 326 ntBASIC5.33□□□□□ -1.56
USP17L11C9JVI0 Z73965.1-201ENST00000623412 2297 ntBASIC5.33□□□□□ -1.56
USP17L11C9JVI0 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
USP17L11C9JVI0 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
USP17L11C9JVI0 AC116096.1-201ENST00000566804 2314 ntBASIC5.32□□□□□ -1.56
USP17L11C9JVI0 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.32□□□□□ -1.56
USP17L11C9JVI0 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
USP17L11C9JVI0 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
USP17L11C9JVI0 SMG1P4-204ENST00000523028 4131 ntBASIC5.32□□□□□ -1.56
USP17L11C9JVI0 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
USP17L11C9JVI0 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
USP17L11C9JVI0 RPL9P7-201ENST00000330965 580 ntBASIC5.32□□□□□ -1.56
USP17L11C9JVI0 RNU4-44P-201ENST00000363050 141 ntBASIC5.32□□□□□ -1.56
USP17L11C9JVI0 RNU6-1317P-201ENST00000364582 104 ntBASIC5.32□□□□□ -1.56
USP17L11C9JVI0 Y_RNA.396-201ENST00000383949 103 ntBASIC5.32□□□□□ -1.56
USP17L11C9JVI0 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.32□□□□□ -1.56
USP17L11C9JVI0 RPL17P36-201ENST00000420302 549 ntBASIC5.32□□□□□ -1.56
USP17L11C9JVI0 AC092573.2-201ENST00000434546 243 ntBASIC5.32□□□□□ -1.56
USP17L11C9JVI0 AL513043.1-201ENST00000439124 535 ntBASIC5.32□□□□□ -1.56
USP17L11C9JVI0 RPL23AP93-201ENST00000440847 484 ntBASIC5.32□□□□□ -1.56
USP17L11C9JVI0 RPS3AP12-201ENST00000443616 753 ntBASIC5.32□□□□□ -1.56
USP17L11C9JVI0 RPS3AP46-201ENST00000448352 682 ntBASIC5.32□□□□□ -1.56
USP17L11C9JVI0 NDUFB1P2-201ENST00000449477 176 ntBASIC5.32□□□□□ -1.56
USP17L11C9JVI0 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC5.32□□□□□ -1.56
USP17L11C9JVI0 FABP5P15-201ENST00000453566 214 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms